Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 1.8e-240 835.5 427 100.0
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 8.1e-196 687.2 434 82.3
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 4.0e-195 684.9 437 82.2
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 2.9e-193 678.7 437 81.2
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 7.2e-160 567.8 426 69.5
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 8.5e-153 544.3 398 70.1
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 9.7e-149 530.8 443 65.9
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 1.7e-148 530.0 376 71.0
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 6.3e-148 528.1 440 65.2
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 7.0e-147 524.6 438 63.7
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 1.6e-146 523.5 428 66.4
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 7.7e-146 521.2 438 65.1
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 9.4e-144 514.2 442 63.6
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 1.0e-142 510.8 448 61.6
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 5.2e-142 508.4 378 69.8
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 2.0e-141 506.5 443 60.7
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 3.3e-141 505.8 422 63.3
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 3.3e-141 505.8 412 65.0
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 1.3e-140 503.8 389 65.8
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 1.7e-140 503.4 396 64.9
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 3.7e-140 502.3 424 63.9
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 4.8e-140 501.9 401 64.8
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 1.4e-139 500.4 403 65.3
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 4.1e-139 498.8 401 64.8
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 5.3e-139 498.4 375 68.5
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 5.3e-139 498.4 401 65.1
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 7.0e-139 498.0 389 65.6
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 9.1e-139 497.7 413 65.4
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 1.2e-138 497.3 430 63.3
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 1.6e-138 496.9 396 64.1
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 7.7e-138 494.6 407 62.9
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 1.0e-137 494.2 441 60.1
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 1.3e-137 493.8 413 63.2
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 2.9e-137 492.7 433 62.6
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 2.9e-137 492.7 396 63.9
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 6.5e-137 491.5 383 66.8
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 1.5e-136 490.3 434 59.4
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 1.9e-136 490.0 431 61.3
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 1.9e-136 490.0 436 60.3
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 8.0e-135 484.6 402 63.4
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 1.0e-134 484.2 399 62.4
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 1.8e-134 483.4 371 65.8
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 1.3e-132 477.2 400 63.2
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 2.4e-131 473.0 386 64.5
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 7.0e-131 471.5 386 64.2
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 1.6e-130 470.3 415 60.0
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 3.5e-130 469.2 422 60.4
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 2.9e-129 466.1 402 61.2
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 3.8e-129 465.7 400 61.8
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 8.6e-129 464.5 402 60.9
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 5.5e-128 461.8 402 60.4
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 4.0e-126 455.7 426 56.1
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 7.5e-125 451.4 380 58.9
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 2.2e-124 449.9 437 54.5
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 2.2e-124 449.9 344 63.4
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 6.3e-124 448.4 382 62.0
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 1.4e-123 447.2 397 61.0
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 2.4e-123 446.4 380 60.0
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 4.1e-123 445.7 391 60.6
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 5.4e-123 445.3 425 58.1
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 3.1e-118 429.5 381 56.4
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 5.4e-115 418.7 402 55.0
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 5.4e-115 418.7 435 52.2
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 1.6e-114 417.2 398 54.3
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 6.0e-114 415.2 401 55.6
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 1.0e-113 414.5 409 53.5
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 2.3e-113 413.3 401 55.1
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 1.1e-112 411.0 425 52.5
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 1.1e-112 411.0 401 54.6
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 1.1e-112 411.0 401 54.6
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 1.5e-112 410.6 429 51.5
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 1.5e-112 410.6 402 54.2
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 1.9e-112 410.2 382 56.3
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 1.8e-110 403.7 380 55.5
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 2.0e-109 400.2 354 60.7
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 4.6e-106 389.0 339 63.4
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 1.0e-105 387.9 381 57.0
AUR62029919 Chenopodium quinoa HOM05D007058 ORTHO05D009036 1.1e-99 367.9 359 54.3
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 1.9e-99 367.1 405 48.1
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 2.4e-99 366.7 381 49.6
Glyma.05G242000 Glycine max HOM05D007058 ORTHO05D009036 3.9e-97 359.4 321 60.1
FvH4_5g16720 Fragaria vesca HOM05D007058 ORTHO05D009036 1.1e-91 341.3 301 59.5
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 7.8e-90 335.1 402 46.0
Rhsim08G0129700 Rhododendron simsii HOM05D007058 ORTHO05D009036 3.0e-89 333.2 305 57.7
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 5.1e-81 305.8 385 44.2
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 5.6e-80 302.4 368 45.7
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 1.3e-76 291.2 388 39.9
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 2.1e-74 283.9 421 40.1
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 3.7e-71 273.1 328 48.5
Gohir.D07G064300 Gossypium hirsutum HOM05D007058 ORTHO05D009036 3.5e-66 256.5 244 57.0
Os01g0516700 Oryza sativa ssp. japonica HOM05D007058 ORTHO05D009036 1.1e-64 251.5 296 48.0
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 1.8e-57 227.6 392 38.0
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 2.5e-56 223.8 375 39.7
Glyma.08G049500 Glycine max HOM05D007058 ORTHO05D009036 2.0e-53 214.2 202 55.4
Zm00001eb132130 Zea mays HOM05D007058 ORTHO05D009036 1.1e-43 181.8 249 42.6
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 5.5e-43 179.5 585 26.2
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 1.1e-40 171.8 116 75.0
arahy.Tifrunner.gnm1.ann1.4SU3WD Arachis hypogaea HOM05D007058 ORTHO05D009036 2.8e-39 167.2 132 62.1
CAN.G1074.8 Capsicum annuum HOM05D007058 ORTHO05D009036 1.2e-34 151.8 131 59.5
SalBow5G0499 Salvia bowleyana HOM05D007058 ORTHO05D010040 5.5e-27 126.3 133 54.1
Cre12.g527950 Chlamydomonas reinhardtii HOM05D007058 ORTHO05D009036 1.1e-22 112.1 356 27.5
CAN.G169.6 Capsicum annuum HOM05D007058 ORTHO05D009036 2.9e-20 104.0 99 57.6
SEGI_28231 Sequoiadendron giganteum HOM05D007058 ORTHO05D009036 6.5e-20 102.8 78 64.1
Gorai.001G067800 Gossypium raimondii HOM05D007058 ORTHO05D009036 9.4e-19 99.0 80 65.0
AUR62029918 Chenopodium quinoa HOM05D007058 ORTHO05D009036 3.4e-16 90.5 80 57.5
Ah.11g045170 Amaranthus hybridus HOM05D007058 ORTHO05D009036 9.8e-16 89.0 78 59.0
BcaC08g46795 Brassica carinata HOM05D007058 ORTHO05D009036 1.4e-14 85.1 80 51.2
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 1.8e-14 84.7 80 51.2
Gohir.D07G064250 Gossypium hirsutum HOM05D007058 ORTHO05D009036 5.9e-13 79.7 61 68.9
arahy.Tifrunner.gnm1.ann1.MMR300 Arachis hypogaea HOM05D007058 ORTHO05D009036 5.5e-11 73.2 75 53.3
Rhsim08G0129900 Rhododendron simsii HOM05D007058 ORTHO05D009036 8.0e-10 69.3 54 64.8
Rhsim08G0129800 Rhododendron simsii HOM05D007058 ORTHO05D021411 1.5e-08 65.1 37 83.8
CAN.G1376.1 Capsicum annuum HOM05D004980 ORTHO05D021411 2.2e-07 61.2 139 32.4


User provided reference genes

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