Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017003 Sechium edule HOM05D007775 ORTHO05D009858 4.8e-157 557.8 275 100.0
ClCG06G005300 Citrullus lanatus HOM05D007775 ORTHO05D009858 1.7e-117 426.4 265 79.6
MELO3C021348.2 Cucumis melo HOM05D007775 ORTHO05D009858 1.5e-110 403.3 267 75.3
CsaV3_6G017340 Cucumis sativus L. HOM05D007775 ORTHO05D009858 2.8e-109 399.1 261 74.7
Cfa015361 Carpinus fangiana HOM05D007775 ORTHO05D009858 7.6e-78 294.7 272 56.2
Atru.chr4.2786 Acer truncatum HOM05D007775 ORTHO05D009858 6.8e-71 271.6 259 53.3
QL06p007731 Quercus lobata HOM05D007775 ORTHO05D009858 3.4e-70 269.2 272 54.0
CiPaw.02G085200 Carya illinoinensis HOM05D007775 ORTHO05D009858 4.9e-69 265.4 265 54.7
Prupe.1G140100 Prunus persica HOM05D007775 ORTHO05D009858 1.2e-67 260.8 279 51.6
Dinv38311 Davidia involucrata HOM05D007775 ORTHO05D009858 6.6e-66 255.0 268 51.1
TWI09G0118 Tripterygium wilfordii HOM05D007775 ORTHO05D009858 1.5e-65 253.8 272 50.7
MD13G1171700 Malus domestica HOM05D007775 ORTHO05D009858 5.6e-65 251.9 273 50.5
Thecc.04G279800 Theobroma cacao HOM05D007775 ORTHO05D009858 5.6e-65 251.9 274 50.0
GSVIVG01017782001 Vitis vinifera HOM05D007775 ORTHO05D009858 1.3e-64 250.8 254 52.8
COL.COLO4_13909 Corchorus olitorius HOM05D007775 ORTHO05D009858 2.8e-64 249.6 262 48.9
TAR362G1316 Trochodendron aralioides HOM05D007775 ORTHO05D009858 8.1e-64 248.1 271 48.7
Manes.15G015200 Manihot esculenta HOM05D007775 ORTHO05D009858 1.8e-63 246.9 257 52.1
Duzib151G1205 Durio zibethinus HOM05D007775 ORTHO05D009858 3.1e-63 246.1 270 49.6
Ciclev10005542m.g Citrus clementina HOM05D007775 ORTHO05D009858 1.3e-61 240.7 261 49.0
RcHm_v2.0_Chr4g0421471 Rosa chinensis HOM05D007775 ORTHO05D009858 4.2e-60 235.7 273 47.6
CANSAT78G0244 Cannabis sativa HOM05D007775 ORTHO05D009858 5.4e-60 235.3 254 48.4
FvH4_4g17570 Fragaria vesca HOM05D007775 ORTHO05D009858 5.4e-60 235.3 263 48.7
Eucgr.B01278 Eucalyptus grandis HOM05D007775 ORTHO05D009858 6.0e-59 231.9 266 48.1
FAN12G2546 Fragaria x ananassa HOM05D007775 ORTHO05D009858 6.0e-59 231.9 255 49.4
Gohir.D10G168200 Gossypium hirsutum HOM05D007775 ORTHO05D009858 2.3e-58 229.9 275 46.9
Gorai.011G187800 Gossypium raimondii HOM05D007775 ORTHO05D009858 2.3e-58 229.9 278 46.4
Potri.008G215200 Populus trichocarpa HOM05D007775 ORTHO05D009858 3.0e-58 229.6 272 48.9
Actinidia40242 Actinidia chinensis HOM05D007775 ORTHO05D009858 3.9e-58 229.2 273 48.4
Aa31LG5G20500 Aethionema arabicum HOM05D007775 ORTHO05D009858 3.9e-58 229.2 269 44.6
Lj6A671T60 Lonicera japonica HOM05D007775 ORTHO05D009858 4.3e-57 225.7 263 49.0
Gohir.A10G161700 Gossypium hirsutum HOM05D007775 ORTHO05D009858 5.6e-57 225.3 270 46.7
Cpa.g.sc197.12 Carica papaya HOM05D007775 ORTHO05D009858 2.1e-56 223.4 259 47.5
Cc03_g02150 Coffea canephora HOM05D007775 ORTHO05D009858 2.1e-56 223.4 271 44.6
FAN07G2931 Fragaria x ananassa HOM05D007775 ORTHO05D009858 4.8e-56 222.2 268 46.6
Rhsim04G0218300 Rhododendron simsii HOM05D007775 ORTHO05D009858 6.2e-56 221.9 261 47.5
Nn3g16301 Nelumbo nucifera HOM05D007775 ORTHO05D009858 1.8e-55 220.3 263 47.9
Nitab4.5_0001459g0060 Nicotiana tabacum HOM05D007775 ORTHO05D009858 9.0e-55 218.0 248 50.0
Sabra08G0155600 Salix brachista HOM05D007775 ORTHO05D009858 1.5e-54 217.2 279 46.2
Sopen06g019650 Solanum pennellii HOM05D007775 ORTHO05D009858 2.0e-54 216.9 258 46.9
Nitab4.5_0002148g0040 Nicotiana tabacum HOM05D007775 ORTHO05D009858 2.6e-54 216.5 255 48.6
PGSC0003DMG400030783 Solanum tuberosum HOM05D007775 ORTHO05D009858 2.6e-54 216.5 251 48.2
Sp4g21450 Schrenkiella parvula HOM05D007775 ORTHO05D009858 3.4e-54 216.1 262 44.3
Solyc06g054580.4 Solanum lycopersicum HOM05D007775 ORTHO05D009858 4.5e-54 215.7 258 46.1
CARHR133870 Cardamine hirsuta HOM05D007775 ORTHO05D009858 5.8e-54 215.3 266 45.5
THA.LOC104820248 Tarenaya hassleriana HOM05D007775 ORTHO05D009858 9.9e-54 214.5 269 42.4
Lsat_1_v5_gn_5_52881 Lactuca sativa HOM05D007775 ORTHO05D009858 1.7e-53 213.8 273 44.3
Thhalv10017000m.g Eutrema salsugineum HOM05D007775 ORTHO05D009858 6.4e-53 211.8 255 45.5
PGR031G0649 Punica granatum HOM05D007775 ORTHO05D009858 6.4e-53 211.8 257 47.5
MBI19_g01943_MAGBIO Magnolia biondii HOM05D007775 ORTHO05D009858 1.4e-52 210.7 265 44.5
Oeu021116.1 Olea europaea HOM05D007775 ORTHO05D009858 1.4e-52 210.7 268 44.4
AT2G39100 Arabidopsis thaliana HOM05D007775 ORTHO05D009858 2.4e-52 209.9 255 45.1
BraA04t18439Z Brassica rapa HOM05D007775 ORTHO05D009858 7.9e-51 204.9 272 44.1
Carub.0004s2115 Capsella rubella HOM05D007775 ORTHO05D009858 1.9e-49 200.3 266 43.2
arahy.Tifrunner.gnm1.ann1.J8QG6N Arachis hypogaea HOM05D007775 ORTHO05D009858 7.4e-49 198.4 270 46.3
C04p67030 Brassica napus HOM05D007775 ORTHO05D009858 3.7e-48 196.1 273 42.9
CAN.G256.16 Capsicum annuum HOM05D007775 ORTHO05D009858 6.2e-48 195.3 259 45.2
BolC4t28205H Brassica oleracea HOM05D007775 ORTHO05D009858 1.4e-47 194.1 269 42.0
arahy.Tifrunner.gnm1.ann1.KJPE0P Arachis hypogaea HOM05D007775 ORTHO05D009858 4.0e-47 192.6 282 44.3
PSO210G6602 Papaver somniferum HOM05D007775 ORTHO05D009858 4.0e-47 192.6 268 41.8
DCAR_024553 Daucus carota HOM05D007775 ORTHO05D009858 1.2e-46 191.0 235 43.0
A04p29770 Brassica napus HOM05D007775 ORTHO05D009858 1.5e-46 190.7 220 48.2
HanXRQChr03g0080871 Helianthus annuus HOM05D007775 ORTHO05D009858 2.0e-46 190.3 268 43.3
Ah.13g074550 Amaranthus hybridus HOM05D007775 ORTHO05D009858 3.4e-46 189.5 255 42.7
Peaxi162Scf00033g01324 Petunia axillaris HOM05D007775 ORTHO05D009858 7.1e-44 181.8 246 43.5
Lalb_Chr13g0303771 Lupinus albus HOM05D007775 ORTHO05D009858 3.9e-42 176.0 276 39.9
BcaC02g12905 Brassica carinata HOM05D007775 ORTHO05D009858 1.8e-39 167.2 201 46.3
Aqoxy2G03074 Aquilegia oxysepala HOM05D007775 ORTHO05D009858 1.2e-38 164.5 219 44.3
FAN12G2785 Fragaria x ananassa HOM05D007775 ORTHO05D009858 7.6e-38 161.8 163 53.4
ECA240G4119 Erigeron canadensis HOM05D007775 ORTHO05D009858 5.5e-36 155.6 235 40.9
Haze_01245 Corylus avellana HOM05D007775 ORTHO05D009858 1.8e-31 140.6 103 65.0
ATR0706G202 Amborella trichopoda HOM05D007775 ORTHO05D009858 3.4e-30 136.3 215 39.1
AL4G36400 Arabidopsis lyrata HOM05D007775 ORTHO05D009858 1.0e-26 124.8 192 39.1
Sc06g0007440 Simmondsia chinensis HOM05D007775 ORTHO05D009858 1.0e-26 124.8 245 32.7
Pp3c21_11960 Physcomitrium patens HOM05D007775 ORTHO05D009858 1.1e-25 121.3 323 28.5
QL06p007898 Quercus lobata HOM05D007775 ORTHO05D009858 7.4e-25 118.6 116 53.4
SMO147G0036 Selaginella moellendorffii HOM05D007775 ORTHO05D009858 6.3e-24 115.5 300 31.0
AL92U10060 Arabidopsis lyrata HOM05D007775 ORTHO05D009858 1.3e-21 107.8 183 37.7
CSS0050081 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 2.5e-20 103.6 86 54.7
CSS0035717 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 1.6e-19 100.9 86 53.5
MSTRG.10078 Avicennia marina HOM05D007775 ORTHO05D009858 1.4e-18 97.8 76 55.3
CSS0036115 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 5.1e-18 95.9 86 52.3
vmacro08108 Vaccinium macrocarpon HOM05D007775 ORTHO05D009858 6.3e-16 89.0 82 50.0
Prupe.8G004900 Prunus persica HOM05D007775 ORTHO05D009858 1.1e-15 88.2 98 48.0
SEGI_08073 Sequoiadendron giganteum HOM05D007775 ORTHO05D009858 3.8e-13 79.7 143 35.7
COL.COLO4_10908 Corchorus olitorius HOM05D007775 ORTHO05D009858 3.2e-12 76.6 63 55.6
SEGI_15450 Sequoiadendron giganteum HOM05D007775 ORTHO05D009858 3.0e-10 70.1 114 36.0


User provided reference genes

Program Settings