Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0016985 Sechium edule HOM05D006625 ORTHO05D008060 3.3e-152 541.6 259 100.0
ClCG02G015910 Citrullus lanatus HOM05D006625 ORTHO05D008060 5.2e-121 438.0 274 77.0
CsaV3_2G005130 Cucumis sativus L. HOM05D006625 ORTHO05D008060 6.0e-117 424.5 279 73.5
Cfa006572 Carpinus fangiana HOM05D006625 ORTHO05D008060 3.9e-84 315.5 267 58.4
GSVIVG01000035001 Vitis vinifera HOM05D006625 ORTHO05D008060 1.5e-83 313.5 270 55.9
Ciclev10002145m.g Citrus clementina HOM05D006625 ORTHO05D008060 1.9e-83 313.2 263 59.7
Prupe.6G327800 Prunus persica HOM05D006625 ORTHO05D008060 4.3e-83 312.0 263 58.2
CiPaw.07G016100 Carya illinoinensis HOM05D006625 ORTHO05D008060 1.6e-82 310.1 265 58.1
Potri.005G035600 Populus trichocarpa HOM05D006625 ORTHO05D008060 2.8e-82 309.3 270 55.9
QL03p005837 Quercus lobata HOM05D006625 ORTHO05D008060 9.0e-81 304.3 266 57.1
arahy.Tifrunner.gnm1.ann1.A4Z4CH Arachis hypogaea HOM05D006625 ORTHO05D008060 2.0e-80 303.1 273 54.6
arahy.Tifrunner.gnm1.ann1.P1SK02 Arachis hypogaea HOM05D006625 ORTHO05D008060 3.4e-80 302.4 273 54.9
Duzib106G0694 Durio zibethinus HOM05D006625 ORTHO05D008060 1.3e-79 300.4 270 55.2
Aa31LG5G15780 Aethionema arabicum HOM05D006625 ORTHO05D008060 2.2e-79 299.7 274 54.0
Glyma.10G155500 Glycine max HOM05D006625 ORTHO05D008060 4.9e-79 298.5 253 56.1
COL.COLO4_13497 Corchorus olitorius HOM05D006625 ORTHO05D008060 1.1e-78 297.4 262 56.9
FAN14G5181 Fragaria x ananassa HOM05D001310 ORTHO05D008060 1.1e-78 297.4 253 57.7
Cpa.g.sc48.33 Carica papaya HOM05D006625 ORTHO05D008060 1.4e-78 297.0 263 54.0
Glyma.20G232800 Glycine max HOM05D006625 ORTHO05D008060 1.9e-78 296.6 267 53.9
CANSAT54G0428 Cannabis sativa HOM05D006625 ORTHO05D008060 2.4e-78 296.2 261 56.3
FvH4_6g05630 Fragaria vesca HOM05D006625 ORTHO05D008060 2.4e-78 296.2 256 57.4
Thecc.05G305300 Theobroma cacao HOM05D006625 ORTHO05D008060 2.4e-78 296.2 270 54.8
FAN05G0213 Fragaria x ananassa HOM05D001310 ORTHO05D008060 3.2e-78 295.8 253 58.1
Lj5g0018133 Lotus japonicus HOM05D006625 ORTHO05D008060 3.2e-78 295.8 269 55.0
FAN14G5649 Fragaria x ananassa HOM05D001310 ORTHO05D008060 4.2e-78 295.4 253 57.3
Psat6g149480 Pisum sativum HOM05D006625 ORTHO05D008060 2.7e-77 292.7 267 53.9
FAN09G2049 Fragaria x ananassa HOM05D001310 ORTHO05D008060 2.3e-76 289.7 253 56.9
Ca_10103_v3 Cicer arietinum L. HOM05D006625 ORTHO05D008060 3.0e-76 289.3 278 52.2
Lalb_Chr21g0310751 Lupinus albus HOM05D006625 ORTHO05D008060 5.1e-76 288.5 264 54.2
Manes.09G165400 Manihot esculenta HOM05D006625 ORTHO05D008060 5.1e-76 288.5 260 56.2
Dinv40271 Davidia involucrata HOM05D006625 ORTHO05D008060 8.7e-76 287.7 264 55.3
RcHm_v2.0_Chr3g0454381 Rosa chinensis HOM05D006625 ORTHO05D008060 8.7e-76 287.7 262 55.3
Sabra05G0036200 Salix brachista HOM05D006625 ORTHO05D008060 1.1e-75 287.3 282 52.8
Medtr1g082740 Medicago truncatula HOM05D006625 ORTHO05D008060 1.5e-75 287.0 267 55.1
MELO3C004279.2 Cucumis melo HOM05D006625 ORTHO05D008060 3.3e-75 285.8 162 80.9
THA.LOC104821879 Tarenaya hassleriana HOM05D006625 ORTHO05D008060 1.3e-74 283.9 254 53.5
TPR.G6108 Trifolium pratense HOM05D006625 ORTHO05D008060 1.3e-74 283.9 268 53.7
Actinidia19797 Actinidia chinensis HOM05D006625 ORTHO05D008060 2.1e-74 283.1 261 54.4
CSS0023168 Camellia sinensis var. sinensis HOM05D006625 ORTHO05D008060 2.1e-74 283.1 264 53.8
VMungo0720G0027 Vigna mungo HOM05D006625 ORTHO05D008060 2.4e-73 279.6 280 50.4
Hma1.2p1_0617F.1_g190230 Hydrangea macrophylla HOM05D006625 ORTHO05D008060 5.3e-73 278.5 273 50.9
MD04G1207100 Malus domestica HOM05D006625 ORTHO05D008060 5.3e-73 278.5 273 53.1
Nitab4.5_0005388g0010 Nicotiana tabacum HOM05D006625 ORTHO05D008060 1.2e-72 277.3 255 52.5
Phvul.007G181000 Phaseolus vulgaris HOM05D006625 ORTHO05D008060 2.0e-72 276.6 271 50.6
TAR362G1087 Trochodendron aralioides HOM05D006625 ORTHO05D008060 2.0e-72 276.6 269 51.7
BraA05t23018Z Brassica rapa HOM05D006625 ORTHO05D008060 3.4e-72 275.8 270 53.0
Gorai.007G001300 Gossypium raimondii HOM05D006625 ORTHO05D008060 3.4e-72 275.8 264 52.7
Gohir.D11G000400 Gossypium hirsutum HOM05D006625 ORTHO05D008060 5.8e-72 275.0 264 53.0
vmacro19631 Vaccinium macrocarpon HOM05D006625 ORTHO05D008060 5.8e-72 275.0 258 51.9
A05p42330 Brassica napus HOM05D006625 ORTHO05D008060 7.6e-72 274.6 270 52.6
Thhalv10021312m.g Eutrema salsugineum HOM05D006625 ORTHO05D008060 2.2e-71 273.1 273 50.5
Sc16g0008430 Simmondsia chinensis HOM05D006625 ORTHO05D008060 6.4e-71 271.6 264 49.2
BolC5t34854H Brassica oleracea HOM05D006625 ORTHO05D008060 1.1e-70 270.8 272 52.9
Hund07059 Selenicereus undatus HOM05D006625 ORTHO05D008060 1.4e-70 270.4 264 50.8
C05p61940 Brassica napus HOM05D006625 ORTHO05D008060 2.5e-70 269.6 272 52.9
TWI56G0867 Tripterygium wilfordii HOM05D006625 ORTHO05D008060 2.5e-70 269.6 234 55.6
AL3G15690 Arabidopsis lyrata HOM05D006625 ORTHO05D008060 9.3e-70 267.7 260 51.5
Peaxi162Scf00037g00234 Petunia axillaris HOM05D006625 ORTHO05D008060 1.6e-69 266.9 265 52.5
Nitab4.5_0002031g0060 Nicotiana tabacum HOM05D006625 ORTHO05D008060 3.5e-69 265.8 269 49.4
Sp3g04100 Schrenkiella parvula HOM05D006625 ORTHO05D008060 6.0e-69 265.0 275 48.4
BcaC05g30013 Brassica carinata HOM05D006625 ORTHO05D008060 7.9e-69 264.6 271 51.7
Cc00_g15580 Coffea canephora HOM05D006625 ORTHO05D008060 1.0e-68 264.2 252 53.2
PGSC0003DMG400028585 Solanum tuberosum HOM05D006625 ORTHO05D008060 2.3e-68 263.1 248 51.2
MSTRG.28006 Avicennia marina HOM05D006625 ORTHO05D008060 3.9e-68 262.3 262 48.9
Carub.0003s0450 Capsella rubella HOM05D006625 ORTHO05D008060 6.7e-68 261.5 261 50.2
Sopen01g042370 Solanum pennellii HOM05D006625 ORTHO05D008060 4.3e-67 258.8 255 49.4
Solyc01g098830.3 Solanum lycopersicum HOM05D006625 ORTHO05D008060 1.3e-66 257.3 255 49.4
FAN02G3749 Fragaria x ananassa HOM05D006625 ORTHO05D008060 3.7e-66 255.8 252 52.0
BcaC05g30142 Brassica carinata HOM05D006625 ORTHO05D008060 8.2e-66 254.6 272 50.7
DCAR_029427 Daucus carota HOM05D006625 ORTHO05D008060 8.2e-66 254.6 253 51.0
Eucgr.H04479 Eucalyptus grandis HOM05D006625 ORTHO05D008060 8.2e-66 254.6 251 51.8
Lsat_1_v5_gn_2_64300 Lactuca sativa HOM05D006625 ORTHO05D008060 2.6e-64 249.6 268 49.6
SGA_v2.0_scaffold81G26083 Striga asiatica HOM05D006625 ORTHO05D008060 3.4e-64 249.2 264 48.9
ECA238G3785 Erigeron canadensis HOM05D006625 ORTHO05D008060 7.6e-64 248.1 250 51.2
Nn4g26222 Nelumbo nucifera HOM05D006625 ORTHO05D008060 7.6e-64 248.1 266 46.6
Haze_04209 Corylus avellana HOM05D006625 ORTHO05D008060 1.3e-63 247.3 236 53.4
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 1.7e-63 246.9 247 48.2
HanXRQChr10g0295051 Helianthus annuus HOM05D006625 ORTHO05D008060 2.5e-62 243.0 254 48.0
Gohir.A11G000800 Gossypium hirsutum HOM05D006625 ORTHO05D008060 4.2e-62 242.3 235 52.8
TWI77G0294 Tripterygium wilfordii HOM05D006625 ORTHO05D008060 4.6e-61 238.8 227 55.1
PSO339G1258 Papaver somniferum HOM05D006625 ORTHO05D008060 6.0e-61 238.4 269 45.4
PGR031G0551 Punica granatum HOM05D006625 ORTHO05D008060 6.0e-61 238.4 258 48.4
Migut.N01952 Erythranthe guttata HOM05D006625 ORTHO05D008060 1.0e-60 237.7 255 45.9
Aqoxy2G03295 Aquilegia oxysepala HOM05D006625 ORTHO05D008060 1.3e-60 237.3 263 46.0
EL10Ac4g09338 Beta vulgaris HOM05D006625 ORTHO05D008060 1.1e-59 234.2 256 47.3
Lj5A588T22 Lonicera japonica HOM05D006625 ORTHO05D008060 9.7e-59 231.1 239 49.8
Rhsim05G0143100 Rhododendron simsii HOM05D006625 ORTHO05D008060 1.3e-58 230.7 232 49.1
Lj5A588T21 Lonicera japonica HOM05D006625 ORTHO05D008060 3.7e-58 229.2 239 49.0
Lj5A576T32 Lonicera japonica HOM05D006625 ORTHO05D008060 4.8e-58 228.8 239 49.4
Lj5A9T24 Lonicera japonica HOM05D006625 ORTHO05D008060 4.1e-57 225.7 240 49.2
Oeu043355.5 Olea europaea HOM05D006625 ORTHO05D008060 3.4e-56 222.6 235 46.0
QL03p006436 Quercus lobata HOM05D006625 ORTHO05D008060 1.3e-55 220.7 147 66.7
Rhsim05G0144100 Rhododendron simsii HOM05D006625 ORTHO05D008060 8.5e-55 218.0 237 47.7
Lj5A11T18 Lonicera japonica HOM05D006625 ORTHO05D008060 2.3e-52 209.9 234 47.9
CiPaw.07G016300 Carya illinoinensis HOM05D006625 ORTHO05D008060 6.7e-52 208.4 240 45.8
ATR0626G410 Amborella trichopoda HOM05D006625 ORTHO05D008060 1.1e-51 207.6 220 45.9
CDE11G1261 Ceratophyllum demersum HOM05D006625 ORTHO05D008060 9.1e-49 198.0 213 43.7
PSO801G0350 Papaver somniferum HOM05D000048 ORTHO05D000207 8.5e-47 191.4 206 46.1
unitig_578.g16758 Utricularia gibba HOM05D004142 ORTHO05D005411 7.2e-46 188.3 231 42.4
Zm00001eb212380 Zea mays HOM05D006625 ORTHO05D008060 2.3e-44 183.3 258 39.1
AT3G05250 Arabidopsis thaliana HOM05D006625 ORTHO05D008060 2.4e-41 173.3 208 46.6
COL.COLO4_10909 Corchorus olitorius HOM05D006625 ORTHO05D008060 1.5e-40 170.6 238 41.6
CARHR079590 Cardamine hirsuta HOM05D006625 ORTHO05D008060 7.7e-40 168.3 210 41.9
AUR62000843 Chenopodium quinoa HOM05D006625 ORTHO05D008060 2.2e-39 166.8 225 44.0
AUR62005130 Chenopodium quinoa HOM05D006625 ORTHO05D008060 6.1e-37 158.7 174 50.0
SEGI_37357 Sequoiadendron giganteum HOM05D006625 ORTHO05D008060 1.5e-30 137.5 197 37.6
Atru.chr2.446 Acer truncatum HOM05D000091 ORTHO05D009985 4.7e-29 132.5 113 55.8
MBI19_g05826_MAGBIO Magnolia biondii HOM05D006625 ORTHO05D008060 2.3e-28 130.2 200 38.5
Mapoly0224s0007 Marchantia polymorpha HOM05D006625 ORTHO05D008060 1.1e-25 121.3 217 33.2
AagrBONN_evm.TU.Sc2ySwM_362.2578 Anthoceros agrestis HOM05D006625 ORTHO05D008060 5.3e-25 119.0 223 34.5
MD12G1221000 Malus domestica HOM05D006625 ORTHO05D008060 2.7e-24 116.7 135 48.9
Lj5A1T20 Lonicera japonica HOM05D006625 ORTHO05D008060 7.7e-24 115.2 226 35.4
Lj5A1T18 Lonicera japonica HOM05D006625 ORTHO05D008060 5.0e-23 112.5 227 32.6
Pp3c3_27350 Physcomitrium patens HOM05D006625 ORTHO05D008060 4.7e-21 105.9 250 30.0
BolC3t17028H Brassica oleracea HOM05D006625 ORTHO05D008060 6.1e-21 105.5 220 33.2
Lj5A10T21 Lonicera japonica HOM05D006625 ORTHO05D008060 9.1e-17 91.7 105 48.6
Lj5A18T33 Lonicera japonica HOM05D006625 ORTHO05D008060 1.6e-16 90.9 103 47.6
Os03g0809800 Oryza sativa ssp. japonica HOM05D006625 ORTHO05D008060 4.5e-16 89.4 182 35.2
FAN05G4155 Fragaria x ananassa HOM05D001310 ORTHO05D001283 5.9e-16 89.0 90 53.3
Hma1.2p1_0617F.1_g190240 Hydrangea macrophylla HOM05D006625 ORTHO05D008060 1.3e-15 87.8 97 48.5
Lj5A11T17 Lonicera japonica HOM05D006625 ORTHO05D008060 1.7e-15 87.4 105 46.7
HPP92_025561 Vanilla planifolia HOM05D006625 ORTHO05D008060 1.3e-10 71.2 60 58.3
MBI19_g05827_MAGBIO Magnolia biondii HOM05D006625 ORTHO05D008060 2.8e-10 70.1 89 43.8
MD12G1221200 Malus domestica HOM05D006625 ORTHO05D008060 4.3e-06 56.2 39 61.5


User provided reference genes

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