Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0016946 Sechium edule HOM05D007988 ORTHO05D009824 5.8e-133 477.6 254 100.0
MELO3C008455.2 Cucumis melo HOM05D007988 ORTHO05D009824 4.3e-59 232.3 270 57.0
CsaV3_6G031310 Cucumis sativus L. HOM05D007988 ORTHO05D009824 2.3e-52 209.9 241 58.9
ClCG08G006150 Citrullus lanatus HOM05D007988 ORTHO05D009824 6.6e-52 208.4 266 55.6
Sed0000785 Sechium edule HOM05D007988 ORTHO05D009824 7.3e-43 178.3 167 63.5
RcHm_v2.0_Chr6g0306951 Rosa chinensis HOM05D007988 ORTHO05D009824 1.1e-30 137.9 307 42.7
Haze_17653 Corylus avellana HOM05D007988 ORTHO05D009824 1.4e-30 137.5 300 38.0
Manes.02G170000 Manihot esculenta HOM05D007988 ORTHO05D009824 1.9e-30 137.1 318 40.3
TWI60G0631 Tripterygium wilfordii HOM05D007988 ORTHO05D009824 1.6e-29 134.0 321 39.6
Gohir.D05G240900 Gossypium hirsutum HOM05D007988 ORTHO05D009824 6.6e-28 128.6 331 36.3
Gorai.009G250000 Gossypium raimondii HOM05D007988 ORTHO05D009824 6.6e-28 128.6 331 36.3
TWI34G1662 Tripterygium wilfordii HOM05D007988 ORTHO05D009824 6.6e-28 128.6 319 38.9
Prupe.1G442100 Prunus persica HOM05D007988 ORTHO05D009824 1.9e-27 127.1 305 40.0
Duzib041G0811 Durio zibethinus HOM05D007988 ORTHO05D009824 1.2e-26 124.4 322 37.9
Ciclev10004037m.g Citrus clementina HOM05D007988 ORTHO05D009824 1.8e-25 120.6 320 35.9
MD15G1088100 Malus domestica HOM05D007988 ORTHO05D009824 6.9e-25 118.6 331 38.7
Potri.002G076200 Populus trichocarpa HOM05D007988 ORTHO05D009824 8.9e-25 118.2 321 37.7
Gohir.A05G239200 Gossypium hirsutum HOM05D007988 ORTHO05D009824 1.2e-24 117.9 330 34.5
CiPaw.16G021200 Carya illinoinensis HOM05D007988 ORTHO05D009824 1.5e-24 117.5 317 35.6
FAN27G1764 Fragaria x ananassa HOM05D007988 ORTHO05D009824 5.8e-24 115.5 306 39.5
Thecc.08G135700 Theobroma cacao HOM05D007988 ORTHO05D009824 5.8e-24 115.5 319 37.9
Duzib093G1224 Durio zibethinus HOM05D007988 ORTHO05D009824 1.3e-23 114.4 325 36.6
QL09p030989 Quercus lobata HOM05D007988 ORTHO05D009824 1.7e-23 114.0 317 37.2
CiPaw.15G029500 Carya illinoinensis HOM05D007988 ORTHO05D009824 2.9e-23 113.2 317 35.3
FvH4_2g35040 Fragaria vesca HOM05D007988 ORTHO05D009824 4.9e-23 112.5 305 38.7
CSS0046822 Camellia sinensis var. sinensis HOM05D007988 ORTHO05D009824 4.2e-22 109.4 307 38.4
GSVIVG01008783001 Vitis vinifera HOM05D007988 ORTHO05D009824 9.3e-22 108.2 320 35.9
Duzib116G0104 Durio zibethinus HOM05D007988 ORTHO05D009824 1.2e-21 107.8 320 35.3
COL.COLO4_33785 Corchorus olitorius HOM05D007988 ORTHO05D009824 3.5e-21 106.3 322 35.4
Lj1g0027207 Lotus japonicus HOM05D007988 ORTHO05D009824 3.0e-20 103.2 321 32.7
Atru.chr13.1616 Acer truncatum HOM05D007988 ORTHO05D009824 1.5e-19 100.9 317 37.2
Cpa.g.sc64.159 Carica papaya HOM05D007988 ORTHO05D009824 3.3e-19 99.8 330 35.2
Oeu022143.1 Olea europaea HOM05D007988 ORTHO05D009824 5.6e-19 99.0 337 31.8
Lj4P663T19 Lonicera japonica HOM05D007988 ORTHO05D009824 9.6e-19 98.2 320 34.1
Sabra05G0140800 Salix brachista HOM05D007988 ORTHO05D009824 1.3e-18 97.8 313 34.8
TPR.G6352 Trifolium pratense HOM05D007988 ORTHO05D009824 1.3e-18 97.8 300 37.0
Nn1g08990 Nelumbo nucifera HOM05D007988 ORTHO05D009824 4.8e-18 95.9 318 33.3
TAR381G0794 Trochodendron aralioides HOM05D007988 ORTHO05D009824 4.8e-18 95.9 302 34.4
Lj4P666T14 Lonicera japonica HOM05D007988 ORTHO05D009824 1.1e-17 94.7 320 33.8
Glyma.04G244300 Glycine max HOM05D007988 ORTHO05D009824 3.1e-17 93.2 335 32.8
Eucgr.F02525 Eucalyptus grandis HOM05D007988 ORTHO05D009824 5.3e-17 92.4 337 33.2
Actinidia29496 Actinidia chinensis HOM05D000744 ORTHO05D000332 6.9e-17 92.0 199 39.7
FAN15G1013 Fragaria x ananassa HOM05D007988 ORTHO05D009824 9.0e-17 91.7 196 44.4
Glyma.06G119000 Glycine max HOM05D007988 ORTHO05D009824 1.2e-16 91.3 341 32.8
Phvul.009G131400 Phaseolus vulgaris HOM05D007988 ORTHO05D009824 5.8e-16 89.0 334 32.3
VMungo1309G2256 Vigna mungo HOM05D007988 ORTHO05D009824 2.2e-15 87.0 326 32.5
Rhsim11G0074200 Rhododendron simsii HOM05D007988 ORTHO05D009824 3.8e-15 86.3 316 32.9
Medtr3g088735 Medicago truncatula HOM05D007988 ORTHO05D009824 4.9e-15 85.9 296 32.1
CANSAT25G2204 Cannabis sativa HOM05D007988 ORTHO05D009824 1.1e-14 84.7 369 31.2
Psat0s3071g0240 Pisum sativum HOM05D007988 ORTHO05D009824 5.4e-14 82.4 205 38.0
Lalb_Chr10g0101461 Lupinus albus HOM05D007988 ORTHO05D009824 1.6e-13 80.9 301 30.6
Ca_16619_v3 Cicer arietinum L. HOM05D007988 ORTHO05D009824 4.6e-13 79.3 303 30.4
FAN20G0590 Fragaria x ananassa HOM05D007988 ORTHO05D009824 5.1e-12 75.9 139 50.4
HanXRQChr09g0256671 Helianthus annuus HOM05D007988 ORTHO05D009824 6.7e-12 75.5 296 32.4
THA.LOC104813286 Tarenaya hassleriana HOM05D012069 ORTHO05D009824 1.5e-11 74.3 312 32.4
Dinv37735 Davidia involucrata HOM05D007988 ORTHO05D009824 2.5e-11 73.6 166 36.7
Hund26769 Selenicereus undatus HOM05D007988 ORTHO05D009824 1.3e-10 71.2 200 37.0
SGA_v2.0_scaffold52G18904 Striga asiatica HOM05D007988 ORTHO05D009824 2.1e-10 70.5 286 32.2
Cc10_g13460 Coffea canephora HOM05D007988 ORTHO05D009824 1.4e-09 67.8 333 28.8
Nn5g28477 Nelumbo nucifera HOM05D007988 ORTHO05D009824 3.1e-09 66.6 318 32.1
CSS0018515 Camellia sinensis var. sinensis HOM05D007988 ORTHO05D009824 9.0e-09 65.1 136 44.1
arahy.Tifrunner.gnm1.ann1.GX31L7 Arachis hypogaea HOM05D007988 ORTHO05D009824 4.5e-08 62.8 311 30.5
PGSC0003DMG400002385 Solanum tuberosum HOM05D007988 ORTHO05D009824 7.6e-08 62.0 179 37.4
AT1G21510 Arabidopsis thaliana HOM05D012069 ORTHO05D009824 9.9e-08 61.6 330 28.8
Aqoxy5G02290 Aquilegia oxysepala HOM05D007988 ORTHO05D009824 2.2e-07 60.5 175 35.4
arahy.Tifrunner.gnm1.ann1.1JY9DA Arachis hypogaea HOM05D007988 ORTHO05D009824 4.9e-07 59.3 315 31.1
AL1G34650 Arabidopsis lyrata HOM05D012069 ORTHO05D009824 6.4e-07 58.9 328 29.3
Carub.0001s2093 Capsella rubella HOM05D012069 ORTHO05D009824 1.1e-06 58.2 332 28.9
CAN.G46.16 Capsicum annuum HOM05D007988 ORTHO05D009824 1.9e-06 57.4 343 28.9
CARHR021870 Cardamine hirsuta HOM05D012069 ORTHO05D009824 1.9e-06 57.4 315 28.6
MBI06_g32176_MAGBIO Magnolia biondii HOM05D007988 ORTHO05D009824 5.5e-06 55.8 54 59.3
Sopen04g026140 Solanum pennellii HOM05D007988 ORTHO05D009824 9.3e-06 55.1 334 27.5


User provided reference genes

Program Settings