Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0016940 Sechium edule HOM05D000047 ORTHO05D001383 1.4e-75 286.2 144 100.0
Sed0019732 Sechium edule HOM05D020903 ORTHO05D001383 1.8e-38 162.9 124 72.6
ClCG09G014950 Citrullus lanatus HOM05D000047 ORTHO05D001383 2.2e-36 156.0 153 56.9
ClCG03G010450 Citrullus lanatus HOM05D000047 ORTHO05D001383 3.5e-34 148.7 129 61.2
MELO3C033014.2 Cucumis melo HOM05D000047 ORTHO05D001383 1.3e-33 146.7 153 53.6
Sed0003251 Sechium edule HOM05D020903 ORTHO05D001383 1.5e-32 143.3 79 97.5
Sed0008905 Sechium edule HOM05D000047 ORTHO05D001383 4.3e-32 141.7 150 54.0
Sed0004738 Sechium edule HOM05D020903 ORTHO05D001383 1.2e-31 140.2 79 94.9
QL05p044848 Quercus lobata HOM05D000047 ORTHO05D000044 9.2e-27 124.0 130 53.1
QL12p042854 Quercus lobata HOM05D000047 ORTHO05D000044 1.2e-26 123.6 135 51.9
ClCG04G003080 Citrullus lanatus HOM05D000047 ORTHO05D001383 1.5e-24 116.7 124 52.4
QL04p030580 Quercus lobata HOM05D000047 ORTHO05D000044 9.6e-24 114.0 163 44.2
QL06p007831 Quercus lobata HOM05D000047 ORTHO05D000044 9.6e-24 114.0 163 44.2
QL93p0305_0012 Quercus lobata HOM05D000047 ORTHO05D000044 9.6e-24 114.0 163 44.2
QL04p080646 Quercus lobata HOM05D000047 ORTHO05D001383 1.6e-23 113.2 155 41.9
QL07p033814 Quercus lobata HOM05D000047 ORTHO05D000044 2.8e-23 112.5 163 44.2
QL01p017897 Quercus lobata HOM05D000047 ORTHO05D000044 6.2e-23 111.3 163 43.6
QL06p019599 Quercus lobata HOM05D000047 ORTHO05D000044 1.4e-22 110.2 163 43.6
QL93p0181_0006 Quercus lobata HOM05D000047 ORTHO05D000044 1.4e-22 110.2 163 43.6
ClCG02G008530 Citrullus lanatus HOM05D000047 ORTHO05D001383 4.0e-22 108.6 130 50.0
MELO3C021895.2 Cucumis melo HOM05D001244 ORTHO05D001076 2.9e-20 102.4 126 47.6
Sed0016038 Sechium edule HOM05D000047 ORTHO05D001383 3.2e-19 99.0 133 47.4
TWI12G0387 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 9.3e-19 97.4 153 37.3
Potri.001G433100 Populus trichocarpa HOM05D000047 ORTHO05D001383 2.1e-18 96.3 157 40.8
Potri.001G184575 Populus trichocarpa HOM05D000047 ORTHO05D001383 2.3e-17 92.8 157 39.5
Sopen06g013120 Solanum pennellii HOM05D000047 ORTHO05D001383 2.3e-17 92.8 158 38.0
Sed0009351 Sechium edule HOM05D000047 ORTHO05D001383 3.0e-17 92.4 131 45.8
Hund07466 Selenicereus undatus HOM05D000047 ORTHO05D001383 3.9e-17 92.0 151 40.4
Sed0011865 Sechium edule HOM05D020903 ORTHO05D001383 5.1e-17 91.7 56 89.3
FvH4_4g01161 Fragaria vesca HOM05D000047 ORTHO05D001383 6.6e-17 91.3 153 35.9
Potri.010G156001 Populus trichocarpa HOM05D000047 ORTHO05D001383 6.6e-17 91.3 157 38.9
FvH4_6g13112 Fragaria vesca HOM05D000047 ORTHO05D001383 8.7e-17 90.9 123 43.9
Sopen04g012780 Solanum pennellii HOM05D000047 ORTHO05D001383 8.7e-17 90.9 157 36.9
Sopen02g009500 Solanum pennellii HOM05D000047 ORTHO05D001383 1.1e-16 90.5 44 84.1
Sopen06g006890 Solanum pennellii HOM05D000047 ORTHO05D001383 1.1e-16 90.5 157 36.9
Sopen08g008120 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-16 90.5 157 36.9
Hund05696 Selenicereus undatus HOM05D000070 ORTHO05D001383 1.5e-16 90.1 43 88.4
Hund05906 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.5e-16 90.1 43 88.4
Sopen01g006520 Solanum pennellii HOM05D000047 ORTHO05D001383 1.5e-16 90.1 157 36.9
Sopen01g018560 Solanum pennellii HOM05D000047 ORTHO05D001383 1.5e-16 90.1 157 36.9
Sopen02g010170 Solanum pennellii HOM05D000047 ORTHO05D001383 1.5e-16 90.1 157 36.9
Sopen03g014800 Solanum pennellii HOM05D000047 ORTHO05D000044 1.5e-16 90.1 157 36.9
Sopen03g021380 Solanum pennellii HOM05D000047 ORTHO05D000044 1.5e-16 90.1 157 36.9
Sopen04g021500 Solanum pennellii HOM05D000047 ORTHO05D001383 1.5e-16 90.1 157 36.9
Sopen06g011440 Solanum pennellii HOM05D000047 ORTHO05D000044 1.5e-16 90.1 157 36.3
Sopen07g020380 Solanum pennellii HOM05D000047 ORTHO05D001383 1.5e-16 90.1 157 36.9
Sopen09g012580 Solanum pennellii HOM05D000047 ORTHO05D001383 1.5e-16 90.1 157 36.9
Sopen09g021660 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-16 90.1 157 36.9
Sopen09g022170 Solanum pennellii HOM05D000047 ORTHO05D001383 1.5e-16 90.1 157 36.9
Sopen12g025220 Solanum pennellii HOM05D000047 ORTHO05D001383 1.5e-16 90.1 157 36.9
PGSC0003DMG400038224 Solanum tuberosum HOM05D000047 ORTHO05D001383 1.5e-16 90.1 158 39.9
Potri.018G011950 Populus trichocarpa HOM05D000047 ORTHO05D001383 1.9e-16 89.7 174 36.2
Sopen02g002090 Solanum pennellii HOM05D000047 ORTHO05D001383 1.9e-16 89.7 157 36.3
Sopen04g024170 Solanum pennellii HOM05D000047 ORTHO05D001383 1.9e-16 89.7 157 36.3
Sopen10g013080 Solanum pennellii HOM05D000047 ORTHO05D001383 1.9e-16 89.7 157 36.9
Sed0001259 Sechium edule HOM05D020903 ORTHO05D001383 2.5e-16 89.4 54 90.7
Sed0011187 Sechium edule HOM05D020903 ORTHO05D001383 2.5e-16 89.4 54 90.7
TWI18G1375 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 3.3e-16 89.0 170 35.3
Sopen05g008560 Solanum pennellii HOM05D000047 ORTHO05D001383 4.3e-16 88.6 157 36.3
Sopen06g009330 Solanum pennellii HOM05D000047 ORTHO05D000044 5.6e-16 88.2 157 36.3
Sopen10g021270 Solanum pennellii HOM05D000047 ORTHO05D001383 5.6e-16 88.2 157 36.3
Sopen11g023890 Solanum pennellii HOM05D000047 ORTHO05D000044 5.6e-16 88.2 43 86.0
FvH4_2g15191 Fragaria vesca HOM05D000047 ORTHO05D001383 7.3e-16 87.8 123 43.1
Sopen01g018380 Solanum pennellii HOM05D000047 ORTHO05D001383 7.3e-16 87.8 157 36.3
Sopen04g011740 Solanum pennellii HOM05D000047 ORTHO05D000044 9.6e-16 87.4 157 36.3
Sopen05g018330 Solanum pennellii HOM05D000047 ORTHO05D000044 9.6e-16 87.4 83 51.8
Sopen12g017880 Solanum pennellii HOM05D000047 ORTHO05D001383 9.6e-16 87.4 123 39.8
Sopen08g019000 Solanum pennellii HOM05D000047 ORTHO05D001383 1.3e-15 87.0 158 34.8
FvH4_6g53791 Fragaria vesca HOM05D000047 ORTHO05D001383 1.6e-15 86.7 119 39.5
Sopen05g020260 Solanum pennellii HOM05D000047 ORTHO05D000044 2.1e-15 86.3 43 83.7
Sopen01g008330 Solanum pennellii HOM05D000047 ORTHO05D001383 2.8e-15 85.9 157 36.9
Sopen09g024060 Solanum pennellii HOM05D000047 ORTHO05D001383 2.8e-15 85.9 157 35.0
Sopen10g018840 Solanum pennellii HOM05D000047 ORTHO05D001383 2.8e-15 85.9 156 35.9
Sopen07g006060 Solanum pennellii HOM05D000047 ORTHO05D000044 3.6e-15 85.5 157 35.7
Sopen08g010280 Solanum pennellii HOM05D000047 ORTHO05D001383 3.6e-15 85.5 154 35.7
Sopen11g011000 Solanum pennellii HOM05D000047 ORTHO05D001383 3.6e-15 85.5 157 36.3
Hund10359 Selenicereus undatus HOM05D000047 ORTHO05D001383 4.8e-15 85.1 139 38.8
Hund14969 Selenicereus undatus HOM05D000047 ORTHO05D001383 4.8e-15 85.1 119 41.2
Sopen06g006810 Solanum pennellii HOM05D000047 ORTHO05D001383 4.8e-15 85.1 157 35.0
Sopen08g015290 Solanum pennellii HOM05D000047 ORTHO05D001383 4.8e-15 85.1 157 35.0
Sopen10g015700 Solanum pennellii HOM05D000047 ORTHO05D001383 6.2e-15 84.7 157 36.9
Sopen12g012050 Solanum pennellii HOM05D000047 ORTHO05D001383 6.2e-15 84.7 157 35.7
Sopen03g018790 Solanum pennellii HOM05D000047 ORTHO05D001383 1.1e-14 84.0 43 81.4
Hund02117 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.4e-14 83.6 43 79.1
Sopen10g007420 Solanum pennellii HOM05D000047 ORTHO05D001383 1.8e-14 83.2 157 36.3
Sopen10g027330 Solanum pennellii HOM05D000047 ORTHO05D001383 1.8e-14 83.2 157 35.7
Sopen08g008240 Solanum pennellii HOM05D000047 ORTHO05D001383 2.4e-14 82.8 43 81.4
Hund09920 Selenicereus undatus HOM05D000047 ORTHO05D001383 3.1e-14 82.4 43 79.1
Sopen05g010090 Solanum pennellii HOM05D000047 ORTHO05D001383 3.1e-14 82.4 42 81.0
Sopen07g021860 Solanum pennellii HOM05D000004 ORTHO05D000002 3.1e-14 82.4 50 68.0
FvH4_4g22272 Fragaria vesca HOM05D008419 ORTHO05D008839 4.0e-14 82.0 163 35.0
FvH4_4g25732 Fragaria vesca HOM05D000047 ORTHO05D001383 4.0e-14 82.0 156 34.0
Sopen05g013390 Solanum pennellii HOM05D000047 ORTHO05D001383 4.0e-14 82.0 157 34.4
Hund14863 Selenicereus undatus HOM05D000047 ORTHO05D001383 5.3e-14 81.6 43 81.4
Sopen07g025200 Solanum pennellii HOM05D000047 ORTHO05D001383 5.3e-14 81.6 157 35.0
Hund08511 Selenicereus undatus HOM05D000047 ORTHO05D001383 6.9e-14 81.3 42 78.6
Sopen01g019760 Solanum pennellii HOM05D000047 ORTHO05D000044 6.9e-14 81.3 154 35.1
Sopen04g022080 Solanum pennellii HOM05D000047 ORTHO05D001383 6.9e-14 81.3 145 36.6
Sopen08g007090 Solanum pennellii HOM05D000047 ORTHO05D001383 6.9e-14 81.3 48 70.8
Sopen11g019170 Solanum pennellii HOM05D000047 ORTHO05D001383 6.9e-14 81.3 43 81.4
PGSC0003DMG400034544 Solanum tuberosum HOM05D000047 ORTHO05D001383 6.9e-14 81.3 154 36.4
CAN.G1076.14 Capsicum annuum HOM05D000152 ORTHO05D001383 9.0e-14 80.9 155 36.8
Potri.018G077983 Populus trichocarpa HOM05D000047 ORTHO05D001383 9.0e-14 80.9 153 35.9
Sopen01g017640 Solanum pennellii HOM05D000047 ORTHO05D001383 9.0e-14 80.9 43 79.1
Sopen09g008960 Solanum pennellii HOM05D000047 ORTHO05D001383 1.5e-13 80.1 157 34.4
ClCG02G011500 Citrullus lanatus HOM05D000047 ORTHO05D000044 2.0e-13 79.7 54 68.5
Hund13352 Selenicereus undatus HOM05D000023 ORTHO05D001383 2.0e-13 79.7 142 36.6
Sopen02g008270 Solanum pennellii HOM05D000047 ORTHO05D000044 2.6e-13 79.3 43 79.1
Sopen02g008560 Solanum pennellii HOM05D000047 ORTHO05D000044 3.4e-13 79.0 157 34.4
Sopen02g002310 Solanum pennellii HOM05D000047 ORTHO05D001383 7.6e-13 77.8 152 32.2
Sopen02g013290 Solanum pennellii HOM05D000047 ORTHO05D001383 9.9e-13 77.4 59 57.6
Sopen04g018110 Solanum pennellii HOM05D000047 ORTHO05D001383 1.3e-12 77.0 156 37.8
PGSC0003DMG400041787 Solanum tuberosum HOM05D000047 ORTHO05D001383 1.7e-12 76.6 157 34.4
Sopen02g008570 Solanum pennellii HOM05D000047 ORTHO05D001383 2.2e-12 76.3 134 39.6
Sopen10g010190 Solanum pennellii HOM05D000047 ORTHO05D001383 2.2e-12 76.3 136 39.7
Sopen02g008820 Solanum pennellii HOM05D000047 ORTHO05D001383 3.8e-12 75.5 42 78.6
Sopen09g026470 Solanum pennellii HOM05D000047 ORTHO05D010949 6.4e-12 74.7 152 32.9
Hund20685 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.1e-11 73.9 42 73.8
Thecc.01G147000 Theobroma cacao HOM05D000047 ORTHO05D001383 1.1e-11 73.9 153 33.3
Hund15656 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.4e-11 73.6 157 35.7
Sopen08g005540 Solanum pennellii HOM05D000047 ORTHO05D001383 1.9e-11 73.2 42 76.2
Sopen10g020080 Solanum pennellii HOM05D000002 ORTHO05D010949 1.9e-11 73.2 151 31.8
Sed0019829 Sechium edule HOM05D000047 ORTHO05D001383 2.4e-11 72.8 82 53.7
Sed0021823 Sechium edule HOM05D010179 ORTHO05D001383 5.4e-11 71.6 119 40.3
PGSC0003DMG400046850 Solanum tuberosum HOM05D000047 ORTHO05D001383 9.3e-11 70.9 175 32.0
Sed0005898 Sechium edule HOM05D010179 ORTHO05D001383 1.2e-10 70.5 119 39.5
Hund12334 Selenicereus undatus HOM05D000047 ORTHO05D001383 2.1e-10 69.7 33 87.9
PGSC0003DMG400046994 Solanum tuberosum HOM05D000047 ORTHO05D001383 2.1e-10 69.7 147 35.4
Sopen03g012850 Solanum pennellii HOM05D000047 ORTHO05D001383 4.6e-10 68.6 43 72.1
FvH4_7g03661 Fragaria vesca HOM05D000047 ORTHO05D001383 6.0e-10 68.2 112 40.2
Sopen08g014520 Solanum pennellii HOM05D000047 ORTHO05D010949 1.8e-09 66.6 152 30.3
Sopen02g013890 Solanum pennellii HOM05D000047 ORTHO05D001383 3.9e-09 65.5 135 35.6
Sopen09g025040 Solanum pennellii HOM05D000047 ORTHO05D010949 3.9e-09 65.5 145 29.7
Hund11047 Selenicereus undatus HOM05D000047 ORTHO05D001383 5.1e-09 65.1 124 37.9
Sopen12g021700 Solanum pennellii HOM05D000047 ORTHO05D000044 5.1e-09 65.1 146 32.2
PGSC0003DMG400035721 Solanum tuberosum HOM05D000047 ORTHO05D001383 6.7e-09 64.7 101 38.6
ClCG07G007580 Citrullus lanatus HOM05D021763 ORTHO05D150651 1.1e-08 63.9 33 84.8
Sed0000384 Sechium edule HOM05D010179 ORTHO05D001383 1.9e-08 63.2 118 33.9
Sopen10g005940 Solanum pennellii HOM05D000047 ORTHO05D011806 1.9e-08 63.2 123 33.3
Sc18g0005220 Simmondsia chinensis HOM05D000047 ORTHO05D001383 9.6e-08 60.8 37 70.3
CAN.G322.98 Capsicum annuum HOM05D000324 ORTHO05D001014 1.6e-07 60.1 144 32.6
TAR626G0713 Trochodendron aralioides HOM05D000047 ORTHO05D001383 2.8e-07 59.3 40 67.5
Sed0021005 Sechium edule HOM05D000047 ORTHO05D001383 4.8e-07 58.5 70 51.4
Sopen12g008330 Solanum pennellii HOM05D000047 ORTHO05D001383 8.1e-07 57.8 142 29.6
Hund18119 Selenicereus undatus HOM05D009315 ORTHO05D008839 1.8e-06 56.6 122 36.9
COL.COLO4_05670 Corchorus olitorius HOM05D000047 ORTHO05D001383 3.1e-06 55.8 30 73.3
FAN20G1001 Fragaria x ananassa HOM05D000047 ORTHO05D001383 4.0e-06 55.5 26 88.5
Sopen09g024340 Solanum pennellii HOM05D000047 ORTHO05D001383 4.0e-06 55.5 30 73.3
Gohir.D04G055325 Gossypium hirsutum HOM05D000047 ORTHO05D001383 6.9e-06 54.7 103 35.9
Sed0013507 Sechium edule HOM05D010179 ORTHO05D001383 9.0e-06 54.3 81 38.3


User provided reference genes

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