Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0016887 Sechium edule HOM05D007191 ORTHO05D009370 1.8e-173 612.5 305 100.0
ClCG10G008240 Citrullus lanatus HOM05D007191 ORTHO05D009370 1.7e-142 509.6 332 79.8
CsaV3_3G006990 Cucumis sativus L. HOM05D007191 ORTHO05D009370 2.8e-142 508.8 327 79.5
MELO3C014951.2 Cucumis melo HOM05D007191 ORTHO05D009370 3.5e-140 501.9 327 79.5
Dinv13563 Davidia involucrata HOM05D007191 ORTHO05D009370 3.0e-107 392.5 322 64.9
Prupe.6G204900 Prunus persica HOM05D007191 ORTHO05D009370 1.9e-106 389.8 319 64.6
Dinv36956 Davidia involucrata HOM05D007191 ORTHO05D009370 2.5e-106 389.4 348 61.5
GSVIVG01003951001 Vitis vinifera HOM05D007191 ORTHO05D003232 3.1e-104 382.5 294 66.0
QL06p036361 Quercus lobata HOM05D007191 ORTHO05D009370 4.0e-104 382.1 293 67.6
RcHm_v2.0_Chr2g0110691 Rosa chinensis HOM05D007191 ORTHO05D003232 6.8e-104 381.3 334 62.0
MD01G1041100 Malus domestica HOM05D007191 ORTHO05D009370 3.4e-103 379.0 316 62.0
Cfa006863 Carpinus fangiana HOM05D007191 ORTHO05D000122 7.5e-103 377.9 319 63.0
FvH4_1g19321 Fragaria vesca HOM05D007191 ORTHO05D009370 2.2e-102 376.3 299 63.9
CSS0046556 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 3.2e-101 372.5 291 64.9
Carub.0007s0220 Capsella rubella HOM05D007191 ORTHO05D009370 7.0e-101 371.3 302 63.6
Ciclev10025907m.g Citrus clementina HOM05D007191 ORTHO05D009370 7.0e-101 371.3 292 65.1
Actinidia25299 Actinidia chinensis HOM05D007191 ORTHO05D009370 4.6e-100 368.6 297 65.0
Atru.chr3.1215 Acer truncatum HOM05D007191 ORTHO05D009370 6.0e-100 368.2 304 62.8
Nn5g29827 Nelumbo nucifera HOM05D007191 ORTHO05D009370 6.0e-100 368.2 272 66.9
TWI74G0882 Tripterygium wilfordii HOM05D007191 ORTHO05D009370 1.0e-99 367.5 308 62.0
CANSAT01G2982 Cannabis sativa HOM05D007191 ORTHO05D009370 3.9e-99 365.5 297 63.3
CiPaw.07G045700 Carya illinoinensis HOM05D007191 ORTHO05D009370 6.6e-99 364.8 300 62.7
CARHR246430 Cardamine hirsuta HOM05D007191 ORTHO05D009370 8.6e-99 364.4 291 63.6
Thhalv10025567m.g Eutrema salsugineum HOM05D007191 ORTHO05D009370 1.1e-98 364.0 294 62.9
AL7G12620 Arabidopsis lyrata HOM05D007191 ORTHO05D009370 1.5e-98 363.6 303 63.0
Manes.13G101800 Manihot esculenta HOM05D007191 ORTHO05D009370 1.5e-98 363.6 292 62.0
BolC1t00117H Brassica oleracea HOM05D007191 ORTHO05D009370 1.9e-98 363.2 300 61.0
Sp7g35660 Schrenkiella parvula HOM05D007191 ORTHO05D009370 1.9e-98 363.2 295 62.7
Haze_03901 Corylus avellana HOM05D007191 ORTHO05D009370 2.5e-98 362.8 359 56.3
BcaNung00953 Brassica carinata HOM05D007191 ORTHO05D009370 4.3e-98 362.1 300 60.7
AT4G38020 Arabidopsis thaliana HOM05D007191 ORTHO05D009370 5.6e-98 361.7 293 62.5
BcaNung05371 Brassica carinata HOM05D007191 ORTHO05D009370 7.3e-98 361.3 293 61.8
Cpa.g.sc55.6 Carica papaya HOM05D007191 ORTHO05D009370 9.5e-98 360.9 286 65.4
FAN19G0835 Fragaria x ananassa HOM05D007191 ORTHO05D000122 9.5e-98 360.9 290 63.4
FAN19G2137 Fragaria x ananassa HOM05D007191 ORTHO05D000122 2.1e-97 359.8 290 63.4
Manes.13G092280 Manihot esculenta HOM05D007191 ORTHO05D009370 2.8e-97 359.4 292 61.3
C01p01190 Brassica napus HOM05D007191 ORTHO05D009370 3.6e-97 359.0 300 60.7
A01p01070 Brassica napus HOM05D007191 ORTHO05D009370 1.4e-96 357.1 300 60.7
BraA01t00105Z Brassica rapa HOM05D007191 ORTHO05D009370 1.4e-96 357.1 300 60.7
THA.LOC104804178 Tarenaya hassleriana HOM05D007191 ORTHO05D009370 6.8e-96 354.8 297 60.9
vmacro13023 Vaccinium macrocarpon HOM05D007191 ORTHO05D009370 3.4e-95 352.4 297 61.3
Aqoxy6G01485 Aquilegia oxysepala HOM05D007191 ORTHO05D009370 4.4e-95 352.1 315 58.1
VMungo0251G2065 Vigna mungo HOM05D007191 ORTHO05D009370 5.8e-95 351.7 284 63.4
Thecc.01G088100 Theobroma cacao HOM05D007191 ORTHO05D009370 1.7e-94 350.1 290 60.3
Solyc11g010900.2 Solanum lycopersicum HOM05D007191 ORTHO05D009370 2.2e-94 349.7 291 60.5
Nitab4.5_0000402g0060 Nicotiana tabacum HOM05D007191 ORTHO05D009370 3.7e-94 349.0 311 60.1
COL.COLO4_27378 Corchorus olitorius HOM05D007191 ORTHO05D009370 4.9e-94 348.6 291 62.5
Psat4g117600 Pisum sativum HOM05D007191 ORTHO05D009370 4.9e-94 348.6 291 60.8
Sopen11g005640 Solanum pennellii HOM05D007191 ORTHO05D009370 4.9e-94 348.6 291 60.5
Peaxi162Scf00085g00523 Petunia axillaris HOM05D007191 ORTHO05D009370 1.4e-93 347.1 291 60.8
Ca_22623_v3 Cicer arietinum L. HOM05D007191 ORTHO05D009370 1.9e-93 346.7 298 61.1
Duzib147G1243 Durio zibethinus HOM05D007191 ORTHO05D009370 1.9e-93 346.7 290 61.0
Medtr8g068220 Medicago truncatula HOM05D007191 ORTHO05D009370 1.9e-93 346.7 284 63.0
Glyma.08G276900 Glycine max HOM05D007191 ORTHO05D009370 2.4e-93 346.3 325 57.8
arahy.Tifrunner.gnm1.ann1.DV4H7C Arachis hypogaea HOM05D007191 ORTHO05D009370 5.4e-93 345.1 284 63.0
Gohir.A11G207400 Gossypium hirsutum HOM05D007191 ORTHO05D009370 7.1e-93 344.7 291 60.8
Phvul.003G287700 Phaseolus vulgaris HOM05D007191 ORTHO05D009370 9.2e-93 344.4 284 62.0
Lsat_1_v5_gn_4_142441 Lactuca sativa HOM05D007191 ORTHO05D009370 2.1e-92 343.2 321 57.3
Lj4g0026970 Lotus japonicus HOM05D007191 ORTHO05D009370 2.1e-92 343.2 284 62.3
TPR.G29816 Trifolium pratense HOM05D007191 ORTHO05D009370 6.0e-92 341.7 284 61.6
Gorai.007G232000 Gossypium raimondii HOM05D007191 ORTHO05D009370 1.3e-91 340.5 291 60.8
Gohir.D11G215700 Gossypium hirsutum HOM05D007191 ORTHO05D009370 1.7e-91 340.1 291 60.8
Potri.005G147600 Populus trichocarpa HOM05D007191 ORTHO05D009370 1.7e-91 340.1 289 62.3
Eucgr.H02435 Eucalyptus grandis HOM05D007191 ORTHO05D009370 5.1e-91 338.6 289 60.6
PSO675G0552 Papaver somniferum HOM05D007191 ORTHO05D009370 8.6e-91 337.8 313 57.2
MBI16_g30311_MAGBIO Magnolia biondii HOM05D007191 ORTHO05D009370 4.3e-90 335.5 315 58.1
Aa31LG6G14960 Aethionema arabicum HOM05D007191 ORTHO05D009370 5.6e-90 335.1 314 56.1
Lalb_Chr16g0392111 Lupinus albus HOM05D007191 ORTHO05D009370 1.2e-89 334.0 284 60.2
AUR62003688 Chenopodium quinoa HOM05D007191 ORTHO05D009370 8.1e-89 331.3 314 57.3
PSO541G2681 Papaver somniferum HOM05D007191 ORTHO05D009370 2.3e-88 329.7 323 55.7
AUR62018000 Chenopodium quinoa HOM05D007191 ORTHO05D009370 3.4e-87 325.9 316 56.0
unitig_27.g25347 Utricularia gibba HOM05D007191 ORTHO05D009370 4.4e-87 325.5 273 59.7
Sabra05G0118000 Salix brachista HOM05D007191 ORTHO05D009370 5.8e-87 325.1 294 59.5
Oeu017115.1 Olea europaea HOM05D007191 ORTHO05D009370 9.9e-87 324.3 337 52.2
CDE04G1458 Ceratophyllum demersum HOM05D007191 ORTHO05D009370 1.3e-86 323.9 297 55.6
HanXRQChr09g0259541 Helianthus annuus HOM05D007191 ORTHO05D009370 2.2e-86 323.2 287 59.6
MSTRG.23388 Avicennia marina HOM05D007191 ORTHO05D009370 1.1e-85 320.9 292 56.8
Migut.H02278 Erythranthe guttata HOM05D007191 ORTHO05D009370 6.0e-84 315.1 308 55.2
Nitab4.5_0005446g0010 Nicotiana tabacum HOM05D007191 ORTHO05D009370 1.0e-83 314.3 307 58.3
Ah.03g143260 Amaranthus hybridus HOM05D007191 ORTHO05D009370 5.1e-83 312.0 294 57.5
arahy.Tifrunner.gnm1.ann1.6T17AW Arachis hypogaea HOM05D007191 ORTHO05D009370 1.9e-82 310.1 271 61.3
SalBow3G4077 Salvia bowleyana HOM05D007191 ORTHO05D009370 4.2e-77 292.4 318 51.6
DCAR_003441 Daucus carota HOM05D007191 ORTHO05D003232 1.7e-75 287.0 247 59.5
Sc03g0000490 Simmondsia chinensis HOM05D007191 ORTHO05D009370 1.7e-75 287.0 299 53.2
Lj2A526T20 Lonicera japonica HOM05D007191 ORTHO05D009370 9.6e-74 281.2 278 55.4
CAN.G1771.10 Capsicum annuum HOM05D007191 ORTHO05D009370 1.6e-73 280.4 251 57.4
Os03g0685100 Oryza sativa ssp. japonica HOM05D007191 ORTHO05D009370 2.6e-71 273.1 287 50.9
SGA_v2.0_scaffold108G30936 Striga asiatica HOM05D007191 ORTHO05D009370 1.3e-70 270.8 278 50.7
ECA232G3284 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.5e-63 247.3 268 53.0
HPP92_014152 Vanilla planifolia HOM05D007191 ORTHO05D009370 2.2e-62 243.4 309 47.6
HPP92_014172 Vanilla planifolia HOM05D007191 ORTHO05D009370 6.4e-62 241.9 323 45.8
PGSC0003DMG400016118 Solanum tuberosum HOM05D007191 ORTHO05D009370 9.3e-61 238.0 202 57.4
Zm00001eb053350 Zea mays HOM05D007191 ORTHO05D009370 1.3e-57 227.6 261 47.1
Pp3c5_6200 Physcomitrium patens HOM05D007191 ORTHO05D009370 1.1e-56 224.6 313 42.2
SMO364G0498 Selaginella moellendorffii HOM05D007191 ORTHO05D009370 2.4e-56 223.4 305 41.0
CBR_g31860 Chara braunii HOM05D000601 ORTHO05D000407 9.0e-48 194.9 295 39.0
Mapoly0036s0111 Marchantia polymorpha HOM05D007191 ORTHO05D009370 3.8e-46 189.5 323 36.8
AUR62043608 Chenopodium quinoa HOM05D007191 ORTHO05D009370 5.5e-45 185.7 128 68.8
Pp3c5_6210 Physcomitrium patens HOM05D007191 ORTHO05D009370 4.8e-41 172.6 280 37.5
PGR102G1719 Punica granatum HOM05D007191 ORTHO05D009370 1.5e-39 167.5 154 55.8
AUR62014153 Chenopodium quinoa HOM05D007191 ORTHO05D002709 4.5e-39 166.0 119 66.4
Cc00_g34880 Coffea canephora HOM05D007191 ORTHO05D009370 2.9e-38 163.3 138 58.0
MCO07G132 Micromonas commoda HOM05D007191 ORTHO05D009370 9.7e-34 148.3 290 33.8
SEGI_38116 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 4.1e-32 142.9 163 44.8
SEGI_29034 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 2.3e-27 127.1 145 45.5
Cre17.g744947 Chlamydomonas reinhardtii HOM05D007191 ORTHO05D009370 8.2e-25 118.6 358 27.1
RcHm_v2.0_Chr6g0269301 Rosa chinensis HOM05D007191 ORTHO05D009370 2.5e-21 107.1 99 53.5
Cc07_g13860 Coffea canephora HOM05D007191 ORTHO05D009370 4.2e-21 106.3 95 57.9
PRCOL_00003319 Prasinoderma coloniale HOM05D007191 ORTHO05D009370 8.0e-20 102.1 298 31.2
Cc07_g13870 Coffea canephora HOM05D007191 ORTHO05D003232 2.7e-12 77.0 50 66.0
CSS0007107 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 1.2e-10 71.6 61 60.7
CSS0022959 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 1.2e-10 71.6 61 60.7


User provided reference genes

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