Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0016797 Sechium edule HOM05D006789 ORTHO05D008460 1.1e-108 396.7 205 100.0
ClCG05G022140 Citrullus lanatus HOM05D006789 ORTHO05D008460 2.6e-91 339.0 210 87.1
CsaV3_5G034990 Cucumis sativus L. HOM05D006789 ORTHO05D008460 2.2e-90 335.9 207 86.5
MELO3C012309.2 Cucumis melo HOM05D006789 ORTHO05D008460 3.2e-89 332.0 207 85.5
Sed0010043 Sechium edule HOM05D006789 ORTHO05D008460 8.7e-87 323.9 205 86.3
Atru.chr3.2036 Acer truncatum HOM05D006789 ORTHO05D008460 7.9e-72 274.2 205 69.8
TWI38G1707 Tripterygium wilfordii HOM05D006789 ORTHO05D008460 8.7e-71 270.8 212 69.3
Dinv24597 Davidia involucrata HOM05D006789 ORTHO05D008460 1.9e-70 269.6 204 71.1
Ciclev10029282m.g Citrus clementina HOM05D006789 ORTHO05D008460 3.3e-70 268.9 207 69.1
Duzib106G0468 Durio zibethinus HOM05D006789 ORTHO05D008460 5.6e-70 268.1 206 68.9
Hma1.2p1_0892F.1_g233210 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 9.6e-70 267.3 204 70.6
arahy.Tifrunner.gnm1.ann1.KMQ9TB Arachis hypogaea HOM05D006789 ORTHO05D008460 1.6e-69 266.5 202 68.8
Potri.008G012100 Populus trichocarpa HOM05D006789 ORTHO05D008460 1.6e-69 266.5 206 68.0
arahy.Tifrunner.gnm1.ann1.G6AZCI Arachis hypogaea HOM05D006789 ORTHO05D008460 2.1e-69 266.2 202 68.8
GSVIVG01027313001 Vitis vinifera HOM05D006789 ORTHO05D008460 2.8e-69 265.8 184 73.9
Thecc.10G129500 Theobroma cacao HOM05D006789 ORTHO05D008460 3.7e-69 265.4 216 67.1
Gohir.A06G170900 Gossypium hirsutum HOM05D006789 ORTHO05D008460 4.8e-69 265.0 208 67.3
CANSAT56G4131 Cannabis sativa HOM05D006789 ORTHO05D008460 6.2e-69 264.6 212 67.5
CiPaw.14G037500 Carya illinoinensis HOM05D006789 ORTHO05D008460 8.1e-69 264.2 204 69.6
Gorai.N006500 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.1e-68 263.8 208 66.8
PGR044G1098 Punica granatum HOM05D006789 ORTHO05D008460 3.1e-68 262.3 208 65.4
Gohir.D06G178700 Gossypium hirsutum HOM05D006789 ORTHO05D008460 4.0e-68 261.9 208 66.3
Prupe.2G061000 Prunus persica HOM05D006789 ORTHO05D008460 4.0e-68 261.9 212 67.9
Lalb_Chr15g0079361 Lupinus albus HOM05D006789 ORTHO05D008460 6.9e-68 261.2 202 67.8
Medtr3g006790 Medicago truncatula HOM05D006789 ORTHO05D008460 2.0e-67 259.6 202 67.3
Glyma.06G315000 Glycine max HOM05D006789 ORTHO05D008460 4.5e-67 258.5 202 68.8
TAR633G0905 Trochodendron aralioides HOM05D006789 ORTHO05D008460 7.6e-67 257.7 207 66.2
Haze_03403 Corylus avellana HOM05D006789 ORTHO05D008460 1.0e-66 257.3 234 62.0
Hund00694 Selenicereus undatus HOM05D006789 ORTHO05D008460 1.7e-66 256.5 221 65.2
EL10Ac4g08777 Beta vulgaris HOM05D006789 ORTHO05D008460 2.9e-66 255.8 207 65.2
Eucgr.J00312 Eucalyptus grandis HOM05D006789 ORTHO05D008460 3.8e-66 255.4 200 67.0
VMungo0647G0732 Vigna mungo HOM05D006789 ORTHO05D008460 3.8e-66 255.4 202 68.3
Sabra08G0007400 Salix brachista HOM05D006789 ORTHO05D008460 4.9e-66 255.0 208 65.9
Lj3g0008710 Lotus japonicus HOM05D006789 ORTHO05D008460 6.5e-66 254.6 202 66.8
DCAR_006626 Daucus carota HOM05D006789 ORTHO05D008460 1.9e-65 253.1 206 65.5
Manes.10G064901 Manihot esculenta HOM05D006789 ORTHO05D008460 2.5e-65 252.7 207 66.2
TPR.G25521 Trifolium pratense HOM05D006789 ORTHO05D008460 4.2e-65 251.9 202 66.3
Lsat_1_v5_gn_2_28141 Lactuca sativa HOM05D006789 ORTHO05D008460 2.1e-64 249.6 204 66.7
Peaxi162Scf00217g00626 Petunia axillaris HOM05D006789 ORTHO05D008460 2.7e-64 249.2 204 63.7
HanXRQChr06g0181521 Helianthus annuus HOM05D006789 ORTHO05D008460 3.5e-64 248.8 207 66.7
Glyma.04G129000 Glycine max HOM05D006789 ORTHO05D008460 6.0e-64 248.1 202 66.8
Rhsim07G0072100 Rhododendron simsii HOM05D006789 ORTHO05D008460 7.9e-64 247.7 219 63.0
vmacro13786 Vaccinium macrocarpon HOM05D006789 ORTHO05D008460 1.0e-63 247.3 228 61.8
MBI19_g19122_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 3.9e-63 245.4 199 66.8
PSO339G2606 Papaver somniferum HOM05D006789 ORTHO05D008460 8.7e-63 244.2 204 63.7
MD02G1265000 Malus domestica HOM05D006789 ORTHO05D008460 1.1e-62 243.8 215 62.3
BcaC06g32200 Brassica carinata HOM05D006789 ORTHO05D008460 1.9e-62 243.0 210 61.0
Phvul.008G161900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 1.9e-62 243.0 203 64.5
THA.LOC104826955 Tarenaya hassleriana HOM05D006789 ORTHO05D008460 1.9e-62 243.0 214 60.3
AT5G04910 Arabidopsis thaliana HOM05D006789 ORTHO05D008460 2.5e-62 242.7 217 60.8
Carub.0006s0385 Capsella rubella HOM05D006789 ORTHO05D008460 2.5e-62 242.7 210 61.9
Sopen10g012840 Solanum pennellii HOM05D006789 ORTHO05D008460 2.5e-62 242.7 200 65.5
Solyc10g039380.2 Solanum lycopersicum HOM05D006789 ORTHO05D008460 7.4e-62 241.1 200 65.0
AL6G14600 Arabidopsis lyrata HOM05D006789 ORTHO05D008460 9.6e-62 240.7 179 68.2
Oeu013184.1 Olea europaea HOM05D006789 ORTHO05D008460 9.6e-62 240.7 213 63.4
Sp6g37890 Schrenkiella parvula HOM05D006789 ORTHO05D008460 9.6e-62 240.7 211 59.7
SalBow4G0168 Salvia bowleyana HOM05D006789 ORTHO05D008460 1.3e-61 240.4 222 60.4
Thhalv10014633m.g Eutrema salsugineum HOM05D006789 ORTHO05D008460 1.6e-61 240.0 213 60.6
MSTRG.5084 Avicennia marina HOM05D006789 ORTHO05D008460 2.8e-61 239.2 217 61.3
A10p31220 Brassica napus HOM05D006789 ORTHO05D008460 6.3e-61 238.0 211 61.1
BraA10t45166Z Brassica rapa HOM05D006789 ORTHO05D008460 6.3e-61 238.0 211 61.6
FvH4_7g05010 Fragaria vesca HOM05D006789 ORTHO05D008460 8.2e-61 237.7 207 62.3
ECA238G4254 Erigeron canadensis HOM05D006789 ORTHO05D008460 1.1e-60 237.3 206 65.0
SGA_v2.0_scaffold196G40989 Striga asiatica HOM05D006789 ORTHO05D008460 1.8e-60 236.5 176 69.3
BolC9t59933H Brassica oleracea HOM05D006789 ORTHO05D008460 2.4e-60 236.1 211 61.6
C09p71840 Brassica napus HOM05D006789 ORTHO05D008460 4.1e-60 235.3 211 61.1
Nn2g14746 Nelumbo nucifera HOM05D006789 ORTHO05D008460 5.3e-60 235.0 176 69.3
FAN06G2149 Fragaria x ananassa HOM05D006789 ORTHO05D008460 6.9e-60 234.6 213 60.6
RcHm_v2.0_Chr1g0331321 Rosa chinensis HOM05D006789 ORTHO05D008460 9.0e-60 234.2 217 59.4
PSO384G0303 Papaver somniferum HOM05D006789 ORTHO05D008460 2.6e-59 232.6 205 62.4
Aqoxy1G00021 Aquilegia oxysepala HOM05D006789 ORTHO05D008460 5.9e-59 231.5 174 68.4
COL.COLO4_28906 Corchorus olitorius HOM05D006789 ORTHO05D008460 1.3e-58 230.3 156 75.0
Sc22g0002280 Simmondsia chinensis HOM05D006789 ORTHO05D001455 1.7e-58 229.9 200 64.0
SGA_v2.0_scaffold196G40996 Striga asiatica HOM05D006789 ORTHO05D008460 1.7e-58 229.9 176 67.6
Gorai.010G208300 Gossypium raimondii HOM05D006789 ORTHO05D008460 2.9e-58 229.2 157 73.9
Actinidia19614 Actinidia chinensis HOM05D000583 ORTHO05D000442 6.5e-58 228.0 194 66.0
Gorai.N006000 Gossypium raimondii HOM05D006789 ORTHO05D008460 5.5e-57 224.9 156 73.1
Aa31LG11G5790 Aethionema arabicum HOM05D006789 ORTHO05D008460 9.3e-57 224.2 179 65.4
Zm00001eb128210 Zea mays HOM05D006789 ORTHO05D008460 2.1e-56 223.0 191 61.8
Hma1.2p1_0892F.1_g233220 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 2.7e-56 222.6 150 77.3
CSS0000309 Camellia sinensis var. sinensis HOM05D006789 ORTHO05D008460 4.6e-56 221.9 282 49.3
Nitab4.5_0004033g0070 Nicotiana tabacum HOM05D006789 ORTHO05D008460 1.0e-55 220.7 155 72.9
Cc02_g32010 Coffea canephora HOM05D006789 ORTHO05D008460 3.0e-55 219.2 160 71.9
CDE08G0307 Ceratophyllum demersum HOM05D006789 ORTHO05D008460 6.7e-55 218.0 193 61.1
Os01g0265700 Oryza sativa ssp. japonica HOM05D006789 ORTHO05D008460 6.7e-55 218.0 182 62.1
Gohir.A06G170906 Gossypium hirsutum HOM05D006789 ORTHO05D008460 5.7e-54 214.9 157 70.7
Nitab4.5_0002156g0010 Nicotiana tabacum HOM05D006789 ORTHO05D008460 1.3e-53 213.8 155 71.0
Migut.N01877 Erythranthe guttata HOM05D006789 ORTHO05D008460 6.3e-53 211.5 211 58.8
Lj7C491T7 Lonicera japonica HOM05D006789 ORTHO05D008460 1.8e-52 209.9 152 74.3
FAN03G1759 Fragaria x ananassa HOM05D006789 ORTHO05D008460 3.1e-52 209.1 211 58.3
Gohir.D06G178832 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.3e-50 203.8 146 69.9
ATR0068G087 Amborella trichopoda HOM05D006789 ORTHO05D008460 1.7e-50 203.4 148 68.9
Carub.0010s0003 Capsella rubella HOM05D006789 ORTHO05D008460 1.4e-49 200.3 163 64.4
SEGI_32817 Sequoiadendron giganteum HOM05D006789 ORTHO05D008460 1.5e-46 190.3 157 61.8
FAN01G0280 Fragaria x ananassa HOM05D006789 ORTHO05D008460 3.3e-46 189.1 207 55.1
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 4.4e-46 188.7 148 66.9
unitig_26.g9495 Utricularia gibba HOM05D006789 ORTHO05D008460 1.7e-45 186.8 176 56.2
Psat5g230200 Pisum sativum HOM05D006789 ORTHO05D008460 1.9e-41 173.3 119 77.3
AUR62014306 Chenopodium quinoa HOM05D006789 ORTHO05D008460 1.4e-39 167.2 182 54.4
MBI05_g14944_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 1.1e-38 164.1 158 56.3
Actinidia29655 Actinidia chinensis HOM05D006789 ORTHO05D008460 9.7e-38 161.0 195 51.8
Pp3c10_8520 Physcomitrium patens HOM05D006789 ORTHO05D008460 1.3e-37 160.6 172 51.7
CARHR208350 Cardamine hirsuta HOM05D006789 ORTHO05D008460 1.0e-31 141.0 87 75.9
TAR633G1630 Trochodendron aralioides HOM05D006789 ORTHO05D008460 7.5e-30 134.8 81 81.5
TAR629G1007 Trochodendron aralioides HOM05D001508 ORTHO05D008460 1.7e-29 133.7 79 82.3
Mapoly0023s0087 Marchantia polymorpha HOM05D006789 ORTHO05D008460 3.7e-29 132.5 191 43.5
Gorai.010G208600 Gossypium raimondii HOM05D006789 ORTHO05D008460 6.3e-29 131.7 143 55.2
Cfa010449 Carpinus fangiana HOM05D006789 ORTHO05D008460 4.5e-27 125.6 118 58.5
SMO364G0543 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 5.0e-26 122.1 179 41.9
Ca_14025_v3 Cicer arietinum L. HOM05D006789 ORTHO05D008460 1.4e-23 114.0 115 53.0
TAR636G3403 Trochodendron aralioides HOM05D006789 ORTHO05D008460 1.4e-23 114.0 72 79.2
SMO353G0288 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 1.7e-21 107.1 170 41.2
CBR_g54451 Chara braunii HOM05D003248 ORTHO05D000301 5.9e-19 98.6 238 30.3
BcaB03g15210 Brassica carinata HOM05D006789 ORTHO05D008460 1.3e-18 97.4 97 53.6
Cfa005731 Carpinus fangiana HOM05D012552 ORTHO05D018926 5.2e-15 85.5 82 56.1
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 1.5e-14 84.0 74 59.5
SHI21242 Sapria himalayana HOM05D006789 ORTHO05D008460 4.1e-12 75.9 88 50.0
Cre16.g683483 Chlamydomonas reinhardtii HOM05D006789 ORTHO05D008460 5.4e-12 75.5 94 42.6
Phvul.005G010900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 7.0e-12 75.1 102 47.1
AUR62034099 Chenopodium quinoa HOM05D006789 ORTHO05D008460 7.8e-11 71.6 61 67.2
SHI05402 Sapria himalayana HOM05D005149 ORTHO05D006251 3.8e-10 69.3 72 47.2
Cfa010304 Carpinus fangiana HOM05D012552 ORTHO05D018926 9.5e-09 64.7 80 45.0
MCO03G486 Micromonas commoda HOM05D006789 ORTHO05D008460 3.4e-06 56.2 96 33.3


User provided reference genes

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