Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0016779 Sechium edule HOM05D007096 ORTHO05D008288 1.5e-38 162.5 90 100.0
ClCG11G009950 Citrullus lanatus HOM05D007096 ORTHO05D008288 7.1e-25 117.1 91 82.4
CsaV3_2G010680 Cucumis sativus L. HOM05D007096 ORTHO05D008288 1.2e-24 116.3 86 80.2
Sed0002990 Sechium edule HOM05D007096 ORTHO05D008288 1.2e-19 99.8 90 73.3
Cfa008979 Carpinus fangiana HOM05D007096 ORTHO05D008288 1.9e-09 65.9 99 49.5
Ah.02g129680 Amaranthus hybridus HOM05D007096 ORTHO05D008288 7.1e-09 63.9 91 41.8
Prupe.1G274800 Prunus persica HOM05D007096 ORTHO05D008288 9.3e-09 63.5 101 50.5
TAR622G0633 Trochodendron aralioides HOM05D000618 ORTHO05D000454 9.3e-09 63.5 89 46.1
Nn3g17242 Nelumbo nucifera HOM05D007096 ORTHO05D008288 1.2e-08 63.2 87 47.1
CiPaw.06G085100 Carya illinoinensis HOM05D007096 ORTHO05D008288 1.6e-08 62.8 92 48.9
Haze_12011 Corylus avellana HOM05D007096 ORTHO05D008288 1.6e-08 62.8 100 49.0
Gorai.005G141500 Gossypium raimondii HOM05D007096 ORTHO05D008288 3.5e-08 61.6 91 48.4
CiPaw.05G135100 Carya illinoinensis HOM05D007096 ORTHO05D008288 4.6e-08 61.2 92 47.8
Gohir.D02G125800 Gossypium hirsutum HOM05D007096 ORTHO05D008288 4.6e-08 61.2 91 48.4
Ciclev10033178m.g Citrus clementina HOM05D007096 ORTHO05D008288 6.0e-08 60.8 99 45.5
Gohir.D12G168200 Gossypium hirsutum HOM05D007096 ORTHO05D008288 6.0e-08 60.8 87 44.8
Gorai.008G181100 Gossypium raimondii HOM05D007096 ORTHO05D008288 6.0e-08 60.8 87 44.8
Duzib268G0913 Durio zibethinus HOM05D007096 ORTHO05D008288 1.3e-07 59.7 98 46.9
Gohir.A12G165100 Gossypium hirsutum HOM05D007096 ORTHO05D008288 2.3e-07 58.9 87 43.7
RcHm_v2.0_Chr4g0439851 Rosa chinensis HOM05D007096 ORTHO05D008288 3.9e-07 58.2 90 48.9
Thecc.02G346100 Theobroma cacao HOM05D007096 ORTHO05D008288 3.9e-07 58.2 98 42.9
Gohir.A03G101000 Gossypium hirsutum HOM05D007096 ORTHO05D008288 6.6e-07 57.4 87 42.5
Manes.05G101400 Manihot esculenta HOM05D007096 ORTHO05D008288 1.5e-06 56.2 96 45.8
Nitab4.5_0000145g0050 Nicotiana tabacum HOM05D007096 ORTHO05D008288 1.5e-06 56.2 82 43.9
TAR374G0516 Trochodendron aralioides HOM05D007096 ORTHO05D008288 1.9e-06 55.8 88 42.0
Nn4g23168 Nelumbo nucifera HOM05D007096 ORTHO05D008288 2.5e-06 55.5 87 42.5
Gohir.D05G304900 Gossypium hirsutum HOM05D007096 ORTHO05D008288 4.3e-06 54.7 99 47.5
TAR629G1384 Trochodendron aralioides HOM05D000618 ORTHO05D000454 5.6e-06 54.3 87 43.7


User provided reference genes

Program Settings