Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0016762 Sechium edule HOM05D025229 ORTHO05D000482 2.8e-247 858.2 443 100.0
Sed0008460 Sechium edule HOM05D007907 ORTHO05D000482 2.3e-60 237.3 291 48.1
Sed0023954 Sechium edule HOM05D007907 ORTHO05D000482 5.7e-59 232.6 268 48.9
Sed0015983 Sechium edule HOM05D007907 ORTHO05D000482 2.4e-57 227.3 167 64.1
Sed0017413 Sechium edule HOM05D019397 ORTHO05D009079 3.9e-52 209.9 244 48.8
Sed0005420 Sechium edule HOM05D025229 ORTHO05D009079 7.7e-48 195.7 411 42.3
MELO3C030528.2 Cucumis melo HOM05D007907 ORTHO05D009079 1.3e-31 141.7 169 43.8
MELO3C033233.2 Cucumis melo HOM05D007907 ORTHO05D009079 2.5e-30 137.5 217 37.3
MELO3C029011.2 Cucumis melo HOM05D007907 ORTHO05D009079 4.7e-29 133.3 218 38.1
MELO3C029044.2 Cucumis melo HOM05D007907 ORTHO05D009079 4.0e-28 130.2 159 43.4
Sed0001848 Sechium edule HOM05D025229 ORTHO05D009079 4.0e-28 130.2 455 30.5
Sed0011016 Sechium edule HOM05D007907 ORTHO05D009079 4.0e-28 130.2 214 40.7
Sed0000312 Sechium edule HOM05D007907 ORTHO05D009079 5.0e-23 113.2 171 34.5
Sed0013335 Sechium edule HOM05D007907 ORTHO05D009079 4.7e-21 106.7 87 58.6
MELO3C034753.2 Cucumis melo HOM05D007907 ORTHO05D009079 2.0e-19 101.3 119 41.2
MELO3C007522.2 Cucumis melo HOM05D007907 ORTHO05D009079 2.6e-19 100.9 240 30.4
CsaV3_6G042820 Cucumis sativus L. HOM05D007907 ORTHO05D009079 2.9e-18 97.4 260 28.8
Sed0021824 Sechium edule HOM05D013362 ORTHO05D013626 4.6e-16 90.1 154 34.4
Sed0018243 Sechium edule HOM05D025229 ORTHO05D373551 6.6e-15 86.3 93 55.9
MELO3C028279.2 Cucumis melo HOM05D007907 ORTHO05D009079 3.3e-14 84.0 105 41.0
Sed0015265 Sechium edule HOM05D008761 ORTHO05D009079 1.6e-13 81.6 143 36.4
ClCG07G007930 Citrullus lanatus HOM05D007907 ORTHO05D009079 2.8e-13 80.9 175 32.0
Nitab4.5_0001308g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.8e-12 78.2 175 30.9
Nitab4.5_0003525g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.1e-12 77.4 150 30.0
Sed0004924 Sechium edule HOM05D013362 ORTHO05D013626 6.8e-12 76.3 129 34.1
Nitab4.5_0004808g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 8.9e-12 75.9 150 30.0
Nitab4.5_0014929g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 8.9e-12 75.9 143 28.7
Ciclev10003531m.g Citrus clementina HOM05D002262 ORTHO05D000482 1.2e-11 75.5 161 31.1
Solyc10g150130.1 Solanum lycopersicum HOM05D002262 ORTHO05D000482 1.2e-11 75.5 146 32.9
Solyc11g061985.1 Solanum lycopersicum HOM05D002262 ORTHO05D000482 1.5e-11 75.1 146 32.9
Nitab4.5_0001896g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.6e-11 74.3 164 29.3
Nitab4.5_0002951g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.6e-11 74.3 165 29.1
MELO3C034427.2 Cucumis melo HOM05D007907 ORTHO05D009079 3.4e-11 73.9 144 33.3
Nitab4.5_0009218g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.4e-11 73.6 177 27.7
CsaV3_3G027900 Cucumis sativus L. HOM05D007907 ORTHO05D009079 7.5e-11 72.8 110 37.3
Nitab4.5_0013676g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 7.5e-11 72.8 177 31.1
Oeu000023.2 Olea europaea HOM05D002262 ORTHO05D000482 7.5e-11 72.8 151 29.1
Nitab4.5_0009415g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 9.8e-11 72.4 143 28.0
Nitab4.5_0011972g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 9.8e-11 72.4 150 30.0
Nitab4.5_0005705g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.7e-10 71.6 141 30.5
Nitab4.5_0005016g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.2e-10 71.2 137 29.9
Nitab4.5_0001927g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.9e-10 70.9 185 28.6
Nitab4.5_0009593g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.9e-10 70.9 143 28.7
TWI59G0381 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 2.9e-10 70.9 155 30.3
Ciclev10017905m.g Citrus clementina HOM05D007816 ORTHO05D000482 4.9e-10 70.1 165 27.9
MELO3C032179.2 Cucumis melo HOM05D007907 ORTHO05D009079 4.9e-10 70.1 87 36.8
Nitab4.5_0003911g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.9e-10 70.1 177 28.8
Oeu018450.1 Olea europaea HOM05D002749 ORTHO05D000708 4.9e-10 70.1 196 26.0
Oeu035155.1 Olea europaea HOM05D002749 ORTHO05D000708 4.9e-10 70.1 200 29.0
PSO063G4195 Papaver somniferum HOM05D007816 ORTHO05D000397 4.9e-10 70.1 165 33.3
TWI18G0509 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 4.9e-10 70.1 148 30.4
Oeu028038.1 Olea europaea HOM05D000700 ORTHO05D000397 6.4e-10 69.7 162 29.0
TWI63G0135 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.1e-09 68.9 148 29.7
Nitab4.5_0007137g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.4e-09 68.6 207 24.6
MELO3C034907.2 Cucumis melo HOM05D008761 ORTHO05D009079 1.9e-09 68.2 119 33.6
Nitab4.5_0002279g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.9e-09 68.2 217 28.6
PSO421G0071 Papaver somniferum HOM05D007816 ORTHO05D000397 1.9e-09 68.2 165 33.3
MELO3C035067.2 Cucumis melo HOM05D008761 ORTHO05D009079 3.2e-09 67.4 130 31.5
Nitab4.5_0004192g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.2e-09 67.4 141 27.7
Nitab4.5_0000924g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.1e-09 67.0 241 27.8
Nitab4.5_0001024g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000482 4.1e-09 67.0 113 28.3
Oeu021073.1 Olea europaea HOM05D006164 ORTHO05D001269 4.1e-09 67.0 149 29.5
TWI75G0282 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 4.1e-09 67.0 163 31.9
MELO3C031312.2 Cucumis melo HOM05D007907 ORTHO05D009079 5.4e-09 66.6 82 39.0
Nitab4.5_0000036g0380 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.4e-09 66.6 150 28.7
Oeu041493.2 Olea europaea HOM05D008585 ORTHO05D000397 5.4e-09 66.6 161 32.3
TWI59G0262 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 5.4e-09 66.6 163 31.9
Ciclev10020564m.g Citrus clementina HOM05D007816 ORTHO05D000397 7.0e-09 66.2 175 25.1
CsaV3_1G032310 Cucumis sativus L. HOM05D010240 ORTHO05D000482 7.0e-09 66.2 139 33.1
Nitab4.5_0001730g0140 Nicotiana tabacum HOM05D002262 ORTHO05D000482 7.0e-09 66.2 102 31.4
CANSAT54G1872 Cannabis sativa HOM05D002262 ORTHO05D000482 9.2e-09 65.9 150 29.3
Nitab4.5_0000227g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.2e-08 65.5 129 31.8
Nitab4.5_0001863g0140 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.2e-08 65.5 200 26.5
Nitab4.5_0004809g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.2e-08 65.5 188 26.6
Nitab4.5_0010898g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.6e-08 65.1 105 31.4
Nitab4.5_0011961g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.6e-08 65.1 102 33.3
Oeu042562.1 Olea europaea HOM05D002262 ORTHO05D000482 1.6e-08 65.1 157 24.8
Sed0020656 Sechium edule HOM05D025229 ORTHO05D372991 1.6e-08 65.1 84 48.8
SGA_v2.0_scaffold126G33830 Striga asiatica HOM05D000679 ORTHO05D000137 1.6e-08 65.1 200 26.5
SGA_v2.0_scaffold178G39480 Striga asiatica HOM05D002262 ORTHO05D000137 1.6e-08 65.1 200 26.5
SGA_v2.0_scaffold219G42531 Striga asiatica HOM05D002262 ORTHO05D000482 1.6e-08 65.1 186 26.9
Sed0023912 Sechium edule HOM05D019397 ORTHO05D000482 2.0e-08 64.7 205 30.2
TWI18G0445 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.0e-08 64.7 153 32.7
TWI74G1109 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 2.0e-08 64.7 153 32.7
TWI77G0850 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.0e-08 64.7 153 32.7
Ciclev10019150m.g Citrus clementina HOM05D007816 ORTHO05D000482 2.7e-08 64.3 175 24.6
MELO3C030266.2 Cucumis melo HOM05D008761 ORTHO05D009079 2.7e-08 64.3 119 31.9
Nitab4.5_0000316g0320 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.7e-08 64.3 134 29.9
Sed0023929 Sechium edule HOM05D007907 ORTHO05D009079 2.7e-08 64.3 54 55.6
MELO3C034303.2 Cucumis melo HOM05D007907 ORTHO05D009079 3.5e-08 63.9 82 39.0
Nitab4.5_0004238g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.5e-08 63.9 144 25.7
Oeu027805.1 Olea europaea HOM05D000700 ORTHO05D000397 3.5e-08 63.9 170 27.1
Nitab4.5_0000326g0300 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.6e-08 63.5 228 28.1
Oeu048688.1 Olea europaea HOM05D002749 ORTHO05D000708 4.6e-08 63.5 138 26.1
Sed0023222 Sechium edule HOM05D007907 ORTHO05D009079 4.6e-08 63.5 93 36.6
SGA_v2.0_scaffold276G46661 Striga asiatica HOM05D000679 ORTHO05D000137 4.6e-08 63.5 158 27.8
SGA_v2.0_scaffold59G20643 Striga asiatica HOM05D000679 ORTHO05D000137 4.6e-08 63.5 158 27.8
BcaC06g34271 Brassica carinata HOM05D001038 ORTHO05D000395 6.0e-08 63.2 155 29.7
BolC7t43636H Brassica oleracea HOM05D001038 ORTHO05D000395 6.0e-08 63.2 156 28.8
Nitab4.5_0002000g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 6.0e-08 63.2 221 25.8
Nitab4.5_0013154g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 6.0e-08 63.2 152 28.3
CsaV3_6G008220 Cucumis sativus L. HOM05D010240 ORTHO05D000482 7.8e-08 62.8 191 28.3
Oeu029820.1 Olea europaea HOM05D008585 ORTHO05D000397 7.8e-08 62.8 145 33.8
Oeu064355.1 Olea europaea HOM05D008585 ORTHO05D000397 7.8e-08 62.8 127 33.9
CANSAT25G2067 Cannabis sativa HOM05D002262 ORTHO05D000482 1.0e-07 62.4 142 29.6
Nitab4.5_0000113g0280 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.0e-07 62.4 75 40.0
SGA_v2.0_scaffold76G25157 Striga asiatica HOM05D002262 ORTHO05D000137 1.0e-07 62.4 159 27.7
TWI14G0228 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.0e-07 62.4 153 32.0
TWI39G0946 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.0e-07 62.4 153 32.0
TWI77G0421 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 1.0e-07 62.4 153 32.0
Nitab4.5_0014346g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.3e-07 62.0 133 33.1
Oeu039421.1 Olea europaea HOM05D006164 ORTHO05D001269 1.3e-07 62.0 139 28.8
TWI63G1251 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.3e-07 62.0 153 34.0
Nitab4.5_0002621g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.7e-07 61.6 127 32.3
CAN.G1344.11 Capsicum annuum HOM05D000679 ORTHO05D000482 2.3e-07 61.2 142 28.2
Nitab4.5_0006980g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.3e-07 61.2 264 26.5
Nitab4.5_0013206g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.3e-07 61.2 202 25.2
CANSAT80G0150 Cannabis sativa HOM05D002262 ORTHO05D000482 3.0e-07 60.8 142 28.9
Nitab4.5_0001708g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.0e-07 60.8 116 28.4
Nitab4.5_0004770g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.0e-07 60.8 131 32.8
Nitab4.5_0006450g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 3.0e-07 60.8 272 24.3
Nitab4.5_0007360g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.0e-07 60.8 221 26.7
Oeu027636.1 Olea europaea HOM05D002749 ORTHO05D000708 3.0e-07 60.8 123 29.3
Ciclev10007144m.g Citrus clementina HOM05D007816 ORTHO05D000482 3.9e-07 60.5 175 24.0
Nitab4.5_0000749g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.9e-07 60.5 125 31.2
Nitab4.5_0002944g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.9e-07 60.5 150 28.0
Oeu038220.1 Olea europaea HOM05D002262 ORTHO05D000482 3.9e-07 60.5 140 27.1
Ciclev10033715m.g Citrus clementina HOM05D007816 ORTHO05D000397 5.0e-07 60.1 175 24.0
Oeu046189.1 Olea europaea HOM05D002749 ORTHO05D000708 5.0e-07 60.1 140 26.4
CANSAT25G2712 Cannabis sativa HOM05D002262 ORTHO05D000482 6.6e-07 59.7 244 27.5
Nitab4.5_0004040g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000482 6.6e-07 59.7 127 31.5
Nitab4.5_0011458g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 6.6e-07 59.7 133 31.6
Oeu009243.1 Olea europaea HOM05D000700 ORTHO05D000397 8.6e-07 59.3 162 27.8
TWI81G0979 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 8.6e-07 59.3 134 33.6
CANSAT54G2680 Cannabis sativa HOM05D002262 ORTHO05D000482 1.1e-06 58.9 237 27.0
Carub.0013s0014 Capsella rubella HOM05D001038 ORTHO05D000395 1.1e-06 58.9 131 29.0
MELO3C027609.2 Cucumis melo HOM05D008761 ORTHO05D009079 1.1e-06 58.9 119 30.3
Oeu001559.1 Olea europaea HOM05D002749 ORTHO05D000708 1.1e-06 58.9 142 26.1
Oeu058706.1 Olea europaea HOM05D008585 ORTHO05D000397 1.1e-06 58.9 111 36.0
TWI18G0429 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.1e-06 58.9 134 32.8
Nitab4.5_0009940g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.5e-06 58.5 143 27.3
SGA_v2.0_scaffold23G10125 Striga asiatica HOM05D000679 ORTHO05D000137 1.5e-06 58.5 148 27.7
MELO3C034600.2 Cucumis melo HOM05D008761 ORTHO05D009079 1.9e-06 58.2 119 30.3
HanXRQChr04g0099521 Helianthus annuus HOM05D010915 ORTHO05D010404 1.9e-06 58.2 107 34.6
Oeu041703.1 Olea europaea HOM05D000700 ORTHO05D000397 1.9e-06 58.2 140 29.3
MELO3C029203.2 Cucumis melo HOM05D008761 ORTHO05D009079 2.5e-06 57.8 112 31.2
Lsat_1_v5_gn_4_99201 Lactuca sativa HOM05D009439 ORTHO05D010827 2.5e-06 57.8 166 32.5
Nitab4.5_0000832g0160 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.5e-06 57.8 134 29.9
Nitab4.5_0002655g0110 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.5e-06 57.8 133 31.6
Nitab4.5_0007069g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.5e-06 57.8 128 31.2
CANSAT35G1168 Cannabis sativa HOM05D002262 ORTHO05D000482 3.3e-06 57.4 138 27.5
Nitab4.5_0000306g0070 Nicotiana tabacum HOM05D000679 ORTHO05D000482 3.3e-06 57.4 154 27.9
Nitab4.5_0001563g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.3e-06 57.4 117 28.2
Nitab4.5_0008587g0040 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.3e-06 57.4 152 28.3
Nitab4.5_0013791g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.3e-06 57.4 127 30.7
Nitab4.5_0014450g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.3e-06 57.4 81 33.3
Oeu037738.1 Olea europaea HOM05D002262 ORTHO05D000482 3.3e-06 57.4 124 27.4
Oeu046913.1 Olea europaea HOM05D000700 ORTHO05D000397 3.3e-06 57.4 167 28.1
SGA_v2.0_scaffold4G02340 Striga asiatica HOM05D000679 ORTHO05D000482 3.3e-06 57.4 79 32.9
BcaB03g12379 Brassica carinata HOM05D001038 ORTHO05D000395 4.3e-06 57.0 147 28.6
Nitab4.5_0006716g0010 Nicotiana tabacum HOM05D005877 ORTHO05D000482 4.3e-06 57.0 152 27.6
Nitab4.5_0011754g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 4.3e-06 57.0 127 29.9
Oeu014738.1 Olea europaea HOM05D002749 ORTHO05D000708 4.3e-06 57.0 138 23.9
Peaxi162Scf00048g01514 Petunia axillaris HOM05D010453 ORTHO05D012004 4.3e-06 57.0 78 37.2
Nitab4.5_0001170g0260 Nicotiana tabacum HOM05D006812 ORTHO05D000482 7.3e-06 56.2 128 28.1
Nitab4.5_0007629g0050 Nicotiana tabacum HOM05D005877 ORTHO05D010356 7.3e-06 56.2 87 34.5
Nitab4.5_0000357g0130 Nicotiana tabacum HOM05D000679 ORTHO05D000482 9.5e-06 55.8 200 25.0
Nitab4.5_0003887g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 9.5e-06 55.8 137 27.0


User provided reference genes

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