Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0016724 Sechium edule HOM05D007078 ORTHO05D008745 1.9e-119 432.6 220 100.0
CsaV3_7G028490 Cucumis sativus L. HOM05D007078 ORTHO05D008745 8.7e-101 370.5 219 85.8
MELO3C015872.2 Cucumis melo HOM05D007078 ORTHO05D008745 3.6e-99 365.2 219 86.3
Dinv11266 Davidia involucrata HOM05D007078 ORTHO05D008745 1.0e-77 293.9 233 67.4
GSVIVG01011060001 Vitis vinifera HOM05D007078 ORTHO05D008745 1.8e-77 293.1 220 70.0
QL12p022959 Quercus lobata HOM05D007078 ORTHO05D008745 1.5e-76 290.0 224 69.6
CiPaw.07G095800 Carya illinoinensis HOM05D007078 ORTHO05D008745 5.7e-76 288.1 229 70.3
Gorai.004G084200 Gossypium raimondii HOM05D007078 ORTHO05D008745 9.6e-76 287.3 207 72.0
CANSAT25G2561 Cannabis sativa HOM05D007078 ORTHO05D008745 4.8e-75 285.0 227 67.8
Hma1.2p1_0628F.1_g191760 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 4.8e-75 285.0 220 67.7
Gohir.D08G078400 Gossypium hirsutum HOM05D007078 ORTHO05D008745 8.2e-75 284.3 207 71.5
HanXRQChr15g0466581 Helianthus annuus HOM05D007078 ORTHO05D008745 8.2e-75 284.3 222 69.4
Nn3g21178 Nelumbo nucifera HOM05D007078 ORTHO05D008745 8.2e-75 284.3 220 67.7
MD03G1271700 Malus domestica HOM05D007078 ORTHO05D008745 1.4e-74 283.5 226 69.5
CSS0036917 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 3.1e-74 282.3 236 65.3
Prupe.8G247900 Prunus persica HOM05D007078 ORTHO05D008745 3.1e-74 282.3 193 76.7
Lsat_1_v5_gn_9_1840 Lactuca sativa HOM05D007078 ORTHO05D008745 4.1e-74 282.0 225 65.8
CSS0044942 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 5.3e-74 281.6 236 65.3
EL10Ac7g17029 Beta vulgaris HOM05D007078 ORTHO05D008745 1.5e-73 280.0 232 64.2
TAR362G1057 Trochodendron aralioides HOM05D007078 ORTHO05D008745 2.0e-73 279.6 188 75.0
Manes.05G071800 Manihot esculenta HOM05D007078 ORTHO05D008745 3.4e-73 278.9 224 66.5
Cfa006079 Carpinus fangiana HOM05D007078 ORTHO05D008745 4.5e-73 278.5 220 67.7
Atru.chr5.1330 Acer truncatum HOM05D007078 ORTHO05D008745 5.9e-73 278.1 222 66.2
RcHm_v2.0_Chr6g0291981 Rosa chinensis HOM05D007078 ORTHO05D008745 7.6e-73 277.7 224 68.8
Potri.014G137300 Populus trichocarpa HOM05D007078 ORTHO05D008745 1.0e-72 277.3 229 67.2
ECA247G1342 Erigeron canadensis HOM05D007078 ORTHO05D008745 1.7e-72 276.6 229 65.5
TWI59G1055 Tripterygium wilfordii HOM05D007078 ORTHO05D008745 1.7e-72 276.6 224 66.5
Lj1g0026447 Lotus japonicus HOM05D007078 ORTHO05D008745 2.9e-72 275.8 232 64.2
Glyma.19G152600 Glycine max HOM05D007078 ORTHO05D008745 3.8e-72 275.4 221 66.1
arahy.Tifrunner.gnm1.ann1.9GKU3H Arachis hypogaea HOM05D007078 ORTHO05D008745 6.5e-72 274.6 219 68.0
Medtr7g094220 Medicago truncatula HOM05D007078 ORTHO05D008745 1.1e-71 273.9 223 66.4
arahy.Tifrunner.gnm1.ann1.ERKA9X Arachis hypogaea HOM05D007078 ORTHO05D008745 1.4e-71 273.5 219 67.6
Ciclev10022169m.g Citrus clementina HOM05D007078 ORTHO05D008745 1.9e-71 273.1 226 65.0
Eucgr.K03409 Eucalyptus grandis HOM05D007078 ORTHO05D008745 1.9e-71 273.1 210 70.0
Ca_08555_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 2.5e-71 272.7 223 65.9
Duzib138G1888 Durio zibethinus HOM05D007078 ORTHO05D008745 2.5e-71 272.7 213 67.6
Phvul.001G147500 Phaseolus vulgaris HOM05D007078 ORTHO05D008745 2.5e-71 272.7 207 67.1
MD11G1292300 Malus domestica HOM05D007078 ORTHO05D008745 4.2e-71 271.9 216 69.4
VMungo1383G1152 Vigna mungo HOM05D007078 ORTHO05D008745 5.5e-71 271.6 159 83.0
Aqoxy5G00564 Aquilegia oxysepala HOM05D007078 ORTHO05D008745 7.2e-71 271.2 220 65.5
DCAR_018382 Daucus carota HOM05D007078 ORTHO05D008745 7.2e-71 271.2 159 82.4
Cpa.g.sc9.128 Carica papaya HOM05D007078 ORTHO05D008745 9.3e-71 270.8 186 74.2
Oeu047893.1 Olea europaea HOM05D007078 ORTHO05D008745 9.3e-71 270.8 215 67.9
Migut.D00250 Erythranthe guttata HOM05D007078 ORTHO05D008745 1.2e-70 270.4 190 72.1
FAN27G0292 Fragaria x ananassa HOM05D007078 ORTHO05D008745 2.1e-70 269.6 224 65.6
PSO210G6132 Papaver somniferum HOM05D007078 ORTHO05D008745 2.1e-70 269.6 185 75.1
Cc09_g03260 Coffea canephora HOM05D007078 ORTHO05D008745 3.6e-70 268.9 155 84.5
FvH4_2g24170 Fragaria vesca HOM05D007078 ORTHO05D008745 3.6e-70 268.9 228 65.4
PSO832G3632 Papaver somniferum HOM05D007078 ORTHO05D008745 4.6e-70 268.5 184 74.5
PGR044G0767 Punica granatum HOM05D007078 ORTHO05D008745 4.6e-70 268.5 145 88.3
Nitab4.5_0005757g0030 Nicotiana tabacum HOM05D007078 ORTHO05D008745 1.0e-69 267.3 217 65.4
Haze_04771 Corylus avellana HOM05D007078 ORTHO05D008745 1.3e-69 266.9 214 69.2
Thhalv10001627m.g Eutrema salsugineum HOM05D007078 ORTHO05D008745 2.3e-69 266.2 217 66.8
CDE12G0236 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 3.0e-69 265.8 205 69.8
Sp4g29960 Schrenkiella parvula HOM05D007078 ORTHO05D008745 5.1e-69 265.0 196 71.4
THA.LOC104823061 Tarenaya hassleriana HOM05D007078 ORTHO05D008745 8.7e-69 264.2 188 73.9
TPR.G32805 Trifolium pratense HOM05D007078 ORTHO05D008745 8.7e-69 264.2 226 64.2
CARHR143460 Cardamine hirsuta HOM05D007078 ORTHO05D008745 4.3e-68 261.9 186 72.6
Nitab4.5_0001436g0040 Nicotiana tabacum HOM05D007078 ORTHO05D008745 4.3e-68 261.9 217 64.1
Os05g0404400 Oryza sativa ssp. japonica HOM05D007078 ORTHO05D008745 5.7e-68 261.5 143 86.0
AT2G48070 Arabidopsis thaliana HOM05D007078 ORTHO05D008745 9.7e-68 260.8 148 85.1
AL4G47660 Arabidopsis lyrata HOM05D007078 ORTHO05D008745 1.3e-67 260.4 156 82.7
ClCG09G006760 Citrullus lanatus HOM05D007078 ORTHO05D008745 1.3e-67 260.4 211 67.3
Psat3g066400 Pisum sativum HOM05D007078 ORTHO05D008745 1.3e-67 260.4 229 64.6
FAN15G0223 Fragaria x ananassa HOM05D007078 ORTHO05D008745 6.3e-67 258.1 244 60.2
ATR0626G125 Amborella trichopoda HOM05D007078 ORTHO05D008745 8.2e-67 257.7 149 81.2
Thecc.01G285900 Theobroma cacao HOM05D007078 ORTHO05D008745 1.1e-66 257.3 217 64.1
Carub.0004s3077 Capsella rubella HOM05D007078 ORTHO05D008745 1.4e-66 256.9 145 85.5
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 1.8e-66 256.5 222 62.6
vmacro02537 Vaccinium macrocarpon HOM05D007078 ORTHO05D008745 1.8e-66 256.5 229 63.3
BcaC02g12558 Brassica carinata HOM05D007078 ORTHO05D008745 2.4e-66 256.1 156 81.4
BolSC55t61232H Brassica oleracea HOM05D007078 ORTHO05D008745 2.4e-66 256.1 156 81.4
PGSC0003DMG400023469 Solanum tuberosum HOM05D007078 ORTHO05D008745 2.4e-66 256.1 190 72.1
A05p00060 Brassica napus HOM05D007078 ORTHO05D008745 4.1e-66 255.4 192 69.8
BraA05t19002Z Brassica rapa HOM05D007078 ORTHO05D008745 4.1e-66 255.4 192 69.8
Glyma.03G149600 Glycine max HOM05D007078 ORTHO05D008745 5.3e-66 255.0 215 61.9
Sabra14G0103700 Salix brachista HOM05D007078 ORTHO05D008745 6.9e-66 254.6 197 68.0
unitig_0.g636 Utricularia gibba HOM05D007078 ORTHO05D008745 6.9e-66 254.6 190 69.5
Solyc05g055850.3 Solanum lycopersicum HOM05D007078 ORTHO05D008745 1.5e-65 253.4 191 68.6
Sopen05g034250 Solanum pennellii HOM05D007078 ORTHO05D008745 1.5e-65 253.4 191 68.6
BcaB02g08732 Brassica carinata HOM05D007078 ORTHO05D008745 2.0e-65 253.1 144 84.7
PGR142G0265 Punica granatum HOM05D007078 ORTHO05D008745 3.4e-65 252.3 150 81.3
Lj1C43T3 Lonicera japonica HOM05D007078 ORTHO05D008745 3.8e-64 248.8 212 63.2
Sc24g0004060 Simmondsia chinensis HOM05D007078 ORTHO05D008745 3.8e-64 248.8 211 63.5
FAN24G3201 Fragaria x ananassa HOM05D007078 ORTHO05D008745 1.1e-63 247.3 212 64.6
AUR62006322 Chenopodium quinoa HOM05D007078 ORTHO05D008745 1.9e-63 246.5 137 86.9
Ah.08g209880 Amaranthus hybridus HOM05D007078 ORTHO05D008745 7.2e-63 244.6 207 65.2
Aa31LG1G29480 Aethionema arabicum HOM05D007078 ORTHO05D008745 3.6e-62 242.3 133 88.7
BNapus_Darmor_BZH_scaffold_188p00040 Brassica napus HOM05D007078 ORTHO05D008745 4.6e-62 241.9 148 81.8
Lalb_Chr01g0020251 Lupinus albus HOM05D007078 ORTHO05D008745 1.0e-61 240.7 162 72.8
AUR62026362 Chenopodium quinoa HOM05D007078 ORTHO05D008745 8.8e-61 237.7 129 89.9
AagrBONN_evm.TU.Sc2ySwM_117.1018 Anthoceros agrestis HOM05D007078 ORTHO05D008745 1.1e-60 237.3 185 64.3
Mapoly0037s0112 Marchantia polymorpha HOM05D007078 ORTHO05D008745 4.8e-59 231.9 189 64.0
SMO358G0655 Selaginella moellendorffii HOM05D007078 ORTHO05D008745 3.8e-56 222.2 155 65.8
Pp3c24_17730 Physcomitrium patens HOM05D007078 ORTHO05D008745 2.5e-55 219.5 170 64.1
CBR_g32237 Chara braunii HOM05D007078 ORTHO05D008745 1.7e-48 196.8 198 55.1
CDE01G0430 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 2.6e-44 183.0 98 85.7
Oeu006229.1 Olea europaea HOM05D007078 ORTHO05D008745 5.7e-44 181.8 90 92.2
MBI19_g21637_MAGBIO Magnolia biondii HOM05D007078 ORTHO05D008745 1.7e-40 170.2 214 52.3
Cre03.g145207 Chlamydomonas reinhardtii HOM05D007078 ORTHO05D008745 1.5e-39 167.2 147 52.4
Gohir.A08G070800 Gossypium hirsutum HOM05D007078 ORTHO05D008745 1.5e-39 167.2 142 64.1
MCO10G051 Micromonas commoda HOM05D007078 ORTHO05D008745 4.2e-39 165.6 130 59.2
SGA_v2.0_scaffold11G05787 Striga asiatica HOM05D007078 ORTHO05D008745 1.0e-37 161.0 136 60.3
Ca_08589_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 3.7e-35 152.5 158 55.7
SEGI_07843 Sequoiadendron giganteum HOM05D007078 ORTHO05D008745 9.1e-34 147.9 148 53.4
Actinidia00723 Actinidia chinensis HOM05D007078 ORTHO05D008745 2.0e-33 146.7 75 88.0
Zm00001eb287740 Zea mays HOM05D007078 ORTHO05D008745 3.8e-32 142.5 106 69.8
HPP92_019174 Vanilla planifolia HOM05D007078 ORTHO05D008745 2.5e-31 139.8 115 65.2
PRCOL_00000964 Prasinoderma coloniale HOM05D007078 ORTHO05D008745 3.2e-31 139.4 137 53.3
Peaxi162Scf00156g00061 Petunia axillaris HOM05D007078 ORTHO05D008745 1.2e-30 137.5 81 85.2
PGR142G2005 Punica granatum HOM05D007078 ORTHO05D008745 6.8e-29 131.7 79 82.3
Actinidia24309 Actinidia chinensis HOM05D007078 ORTHO05D008745 5.0e-24 115.5 68 77.9
Hma1.2p1_0628F.1_g191770 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 1.4e-21 107.5 56 89.3


User provided reference genes

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