Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0016714 Sechium edule HOM05D006398 ORTHO05D007983 6.1e-51 204.1 124 100.0
Sed0010545 Sechium edule HOM05D006398 ORTHO05D007983 6.9e-39 164.1 125 75.2
CsaV3_6G047960 Cucumis sativus L. HOM05D006398 ORTHO05D007983 1.0e-37 160.2 125 76.8
MELO3C007985.2 Cucumis melo HOM05D006398 ORTHO05D007983 2.5e-36 155.6 126 75.4
COL.COLO4_15698 Corchorus olitorius HOM05D006398 ORTHO05D007983 4.4e-25 118.2 120 64.2
QL06p053503 Quercus lobata HOM05D006398 ORTHO05D007983 8.2e-24 114.0 123 65.9
CiPaw.03G212200 Carya illinoinensis HOM05D006398 ORTHO05D007983 3.1e-23 112.1 119 66.4
Hma1.2p1_0085F.1_g044270 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 4.1e-23 111.7 118 60.2
Thecc.04G122700 Theobroma cacao HOM05D006398 ORTHO05D007983 9.1e-23 110.5 124 55.6
Duzib133G0235 Durio zibethinus HOM05D006398 ORTHO05D007983 1.2e-22 110.2 124 65.3
Dinv24399 Davidia involucrata HOM05D006398 ORTHO05D007983 2.0e-22 109.4 113 60.2
Dinv28289 Davidia involucrata HOM05D006398 ORTHO05D007983 2.0e-22 109.4 113 60.2
Ciclev10026700m.g Citrus clementina HOM05D006398 ORTHO05D007983 4.5e-22 108.2 119 63.9
Prupe.7G188600 Prunus persica HOM05D006398 ORTHO05D007983 4.5e-22 108.2 121 56.2
Actinidia28761 Actinidia chinensis HOM05D006398 ORTHO05D007983 5.9e-22 107.8 123 65.9
CSS0046434 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 5.9e-22 107.8 123 59.3
CSS0002146 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 1.0e-21 107.1 123 56.9
Cfa011161 Carpinus fangiana HOM05D006398 ORTHO05D007983 1.0e-21 107.1 124 62.1
Dinv19113 Davidia involucrata HOM05D006398 ORTHO05D007983 3.8e-21 105.1 115 57.4
Manes.02G117704 Manihot esculenta HOM05D006398 ORTHO05D007983 6.5e-21 104.4 87 66.7
Lj4P245T44 Lonicera japonica HOM05D006398 ORTHO05D007983 8.5e-21 104.0 123 56.9
Gohir.D07G081300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 1.1e-20 103.6 107 69.2
Gorai.001G086400 Gossypium raimondii HOM05D006398 ORTHO05D007983 1.1e-20 103.6 107 69.2
TAR376G1029 Trochodendron aralioides HOM05D006398 ORTHO05D007983 2.5e-20 102.4 86 67.4
Rhsim10G0190200 Rhododendron simsii HOM05D006398 ORTHO05D007983 3.2e-20 102.1 86 66.3
TAR381G1497 Trochodendron aralioides HOM05D006398 ORTHO05D007983 3.2e-20 102.1 86 67.4
Gohir.A11G167300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 4.2e-20 101.7 123 65.0
Atru.chr3.7 Acer truncatum HOM05D006398 ORTHO05D007983 7.2e-20 100.9 102 61.8
Gohir.A07G076575 Gossypium hirsutum HOM05D006398 ORTHO05D007983 7.2e-20 100.9 107 66.4
vmacro20410 Vaccinium macrocarpon HOM05D006398 ORTHO05D007983 7.2e-20 100.9 86 65.1
Manes.01G158600 Manihot esculenta HOM05D006398 ORTHO05D007983 2.1e-19 99.4 115 54.8
Nn6g31587 Nelumbo nucifera HOM05D006398 ORTHO05D007983 2.1e-19 99.4 86 65.1
Gohir.D11G173600 Gossypium hirsutum HOM05D006398 ORTHO05D007983 2.7e-19 99.0 123 63.4
Gorai.007G185900 Gossypium raimondii HOM05D006398 ORTHO05D007983 2.7e-19 99.0 123 63.4
Oeu024785.2 Olea europaea HOM05D006398 ORTHO05D007983 2.7e-19 99.0 101 61.4
Cfa000559 Carpinus fangiana HOM05D006398 ORTHO05D007983 3.6e-19 98.6 110 55.5
Oeu000786.1 Olea europaea HOM05D006398 ORTHO05D007983 3.6e-19 98.6 101 70.3
Potri.011G146400 Populus trichocarpa HOM05D006398 ORTHO05D007983 4.7e-19 98.2 119 54.6
MSTRG.19082 Avicennia marina HOM05D006398 ORTHO05D007983 6.1e-19 97.8 86 73.3
MBI04_g11522_MAGBIO Magnolia biondii HOM05D006398 ORTHO05D007983 1.0e-18 97.1 103 56.3
DCAR_014127 Daucus carota HOM05D006398 ORTHO05D007983 1.4e-18 96.7 86 64.0
Lj2g0016631 Lotus japonicus HOM05D006398 ORTHO05D007983 2.3e-18 95.9 105 61.0
Lalb_Chr16g0380261 Lupinus albus HOM05D006398 ORTHO05D007983 8.8e-18 94.0 120 58.3
Sabra11G0131300 Salix brachista HOM05D006398 ORTHO05D007983 1.2e-17 93.6 128 50.0
Cfa007121 Carpinus fangiana HOM05D006398 ORTHO05D007983 5.7e-17 91.3 124 59.7
Cfa012756 Carpinus fangiana HOM05D006398 ORTHO05D007983 5.7e-17 91.3 85 74.1
PSO017G0885 Papaver somniferum HOM05D006398 ORTHO05D007983 5.7e-17 91.3 97 58.8
Medtr5g025015 Medicago truncatula HOM05D006398 ORTHO05D007983 7.5e-17 90.9 85 60.0
PSO017G7180 Papaver somniferum HOM05D006398 ORTHO05D007983 7.5e-17 90.9 115 55.7
Psat2g147080 Pisum sativum HOM05D006398 ORTHO05D007983 7.5e-17 90.9 85 57.6
SalBow3G3387 Salvia bowleyana HOM05D006398 ORTHO05D007983 1.3e-16 90.1 119 50.4
TPR.G33762 Trifolium pratense HOM05D006398 ORTHO05D007983 1.7e-16 89.7 85 58.8
FAN23G0152 Fragaria x ananassa HOM05D006398 ORTHO05D007983 2.2e-16 89.4 85 57.6
FAN28G0584 Fragaria x ananassa HOM05D006398 ORTHO05D007983 3.7e-16 88.6 83 61.4
HanXRQChr10g0316121 Helianthus annuus HOM05D006398 ORTHO05D007983 3.7e-16 88.6 111 50.5
MD15G1226600 Malus domestica HOM05D006398 ORTHO05D007983 4.8e-16 88.2 87 62.1
Ca_25041_v3 Cicer arietinum L. HOM05D006398 ORTHO05D007983 1.1e-15 87.0 120 45.8
Haze_03650 Corylus avellana HOM05D000071 ORTHO05D007983 1.1e-15 87.0 87 74.7
FAN26G0304 Fragaria x ananassa HOM05D006398 ORTHO05D007983 1.1e-15 87.0 85 56.5
PGR119G1180 Punica granatum HOM05D006398 ORTHO05D007983 1.1e-15 87.0 122 59.8
FvH4_1g09810 Fragaria vesca HOM05D006398 ORTHO05D007983 1.4e-15 86.7 85 55.3
FAN19G1193 Fragaria x ananassa HOM05D006398 ORTHO05D007983 1.4e-15 86.7 85 55.3
TWI53G1768 Tripterygium wilfordii HOM05D006398 ORTHO05D007983 1.4e-15 86.7 86 67.4
MD02G1107400 Malus domestica HOM05D006398 ORTHO05D007983 2.4e-15 85.9 80 61.2
Aqoxy5G00947 Aquilegia oxysepala HOM05D006398 ORTHO05D007983 3.1e-15 85.5 88 67.0
Nitab4.5_0011544g0020 Nicotiana tabacum HOM05D006398 ORTHO05D007983 3.1e-15 85.5 125 47.2
Phvul.002G119800 Phaseolus vulgaris HOM05D006398 ORTHO05D007983 3.1e-15 85.5 109 60.6
Eucgr.J02575 Eucalyptus grandis HOM05D006398 ORTHO05D007983 5.4e-15 84.7 119 58.0
Nitab4.5_0012518g0010 Nicotiana tabacum HOM05D006398 ORTHO05D007983 5.4e-15 84.7 125 47.2
TAR628G0945 Trochodendron aralioides HOM05D006398 ORTHO05D007983 1.2e-14 83.6 55 80.0
ECA238G1438 Erigeron canadensis HOM05D006398 ORTHO05D007983 1.6e-14 83.2 123 48.8
VMungo1215G0575 Vigna mungo HOM05D006398 ORTHO05D007983 1.6e-14 83.2 117 59.0
RcHm_v2.0_Chr2g0096641 Rosa chinensis HOM05D006398 ORTHO05D007983 3.5e-14 82.0 85 67.1
ATR0605G223 Amborella trichopoda HOM05D006398 ORTHO05D007983 4.5e-14 81.6 89 66.3
CANSAT56G1034 Cannabis sativa HOM05D006398 ORTHO05D007983 4.5e-14 81.6 116 56.9
Glyma.01G155800 Glycine max HOM05D006398 ORTHO05D007983 1.3e-13 80.1 117 58.1
Glyma.11G089000 Glycine max HOM05D006398 ORTHO05D007983 1.3e-13 80.1 113 59.3
Peaxi162Scf00981g00021 Petunia axillaris HOM05D006398 ORTHO05D007983 2.2e-13 79.3 119 52.1
Migut.J00328 Erythranthe guttata HOM05D006398 ORTHO05D007983 5.0e-13 78.2 86 54.7
PGR042G1229 Punica granatum HOM05D006398 ORTHO05D007983 6.5e-13 77.8 86 66.3
Hma1.2p1_0353F.1_g133130 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 1.5e-12 76.6 101 48.5
Sopen02g017390 Solanum pennellii HOM05D006398 ORTHO05D007983 3.2e-12 75.5 119 43.7
Solyc02g068290.2 Solanum lycopersicum HOM05D006398 ORTHO05D007983 4.2e-12 75.1 119 43.7
Lsat_1_v5_gn_2_72860 Lactuca sativa HOM05D006398 ORTHO05D007983 5.5e-12 74.7 61 60.7
EL10Ac5g11754 Beta vulgaris HOM05D006398 ORTHO05D007983 7.2e-12 74.3 87 48.3
PGSC0003DMG400009426 Solanum tuberosum HOM05D006398 ORTHO05D007983 7.2e-12 74.3 124 45.2
Sabra16G0308300 Salix brachista HOM05D006398 ORTHO05D007983 6.1e-11 71.2 107 44.9
Ah.02g115220 Amaranthus hybridus HOM05D006398 ORTHO05D007983 8.0e-11 70.9 85 49.4
SGA_v2.0_scaffold126G33784 Striga asiatica HOM05D006398 ORTHO05D007983 1.0e-10 70.5 106 47.2
HPP92_018846 Vanilla planifolia HOM05D006398 ORTHO05D007983 1.4e-10 70.1 126 37.3
arahy.Tifrunner.gnm1.ann1.GQ5KDA Arachis hypogaea HOM05D006398 ORTHO05D007983 5.2e-10 68.2 51 70.6
CAN.G883.23 Capsicum annuum HOM05D006398 ORTHO05D007983 5.2e-10 68.2 123 52.0
CDE06G2001 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 5.2e-10 68.2 122 42.6
CDE04G3216 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 2.6e-09 65.9 125 41.6
HPP92_018898 Vanilla planifolia HOM05D006398 ORTHO05D007983 2.6e-09 65.9 91 45.1
SHI11157 Sapria himalayana HOM05D006398 ORTHO05D007983 3.4e-09 65.5 65 53.8
Zm00001eb236520 Zea mays HOM05D006398 ORTHO05D007983 9.8e-09 63.9 123 48.8
Lalb_Chr05g0215011 Lupinus albus HOM05D006398 ORTHO05D007983 2.8e-08 62.4 52 63.5
Thhalv10010838m.g Eutrema salsugineum HOM05D006398 ORTHO05D007983 2.4e-07 59.3 86 53.5
Cpa.g.sc178.36 Carica papaya HOM05D006398 ORTHO05D007983 4.1e-07 58.5 46 67.4
Os02g0193500 Oryza sativa ssp. japonica HOM05D006398 ORTHO05D007983 1.2e-06 57.0 86 40.7
Sp5g10740 Schrenkiella parvula HOM05D006398 ORTHO05D007983 1.2e-06 57.0 86 53.5
AT3G51500 Arabidopsis thaliana HOM05D006398 ORTHO05D007983 7.7e-06 54.3 87 54.0


User provided reference genes

Program Settings