Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0016652 Sechium edule HOM05D023073 ORTHO05D005174 1.1e-75 286.6 148 100.0
ClCG04G008210 Citrullus lanatus HOM05D023073 ORTHO05D005174 1.1e-30 137.1 152 55.9
Sed0010435 Sechium edule HOM05D023073 ORTHO05D005174 4.0e-25 118.6 150 53.3
MELO3C003127.2 Cucumis melo HOM05D023073 ORTHO05D005174 1.6e-21 106.7 156 48.1
CsaV3_4G024960 Cucumis sativus L. HOM05D023073 ORTHO05D005174 4.6e-21 105.1 153 49.7
Manes.09G089000 Manihot esculenta HOM05D005967 ORTHO05D005174 1.1e-09 67.4 130 37.7
Migut.J00334 Erythranthe guttata HOM05D005967 ORTHO05D005174 2.4e-09 66.2 131 38.2
Cpa.g.sc81.161 Carica papaya HOM05D005967 ORTHO05D005174 6.8e-09 64.7 83 41.0
Oeu036150.1 Olea europaea HOM05D005967 ORTHO05D005174 1.5e-08 63.5 138 37.7
Oeu036152.1 Olea europaea HOM05D005967 ORTHO05D005174 1.5e-08 63.5 87 49.4
Nn5g26925 Nelumbo nucifera HOM05D005967 ORTHO05D005174 2.6e-08 62.8 89 44.9
Nn2g10378 Nelumbo nucifera HOM05D005967 ORTHO05D005174 3.4e-08 62.4 85 49.4
CSS0050426 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 4.4e-08 62.0 109 39.4
Gohir.D01G212200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 5.8e-08 61.6 92 43.5
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 5.8e-08 61.6 85 45.9
Gohir.D04G121000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 7.6e-08 61.2 120 38.3
Gorai.012G103600 Gossypium raimondii HOM05D005967 ORTHO05D005174 7.6e-08 61.2 120 38.3
CiPaw.09G192100 Carya illinoinensis HOM05D005967 ORTHO05D005174 1.3e-07 60.5 84 45.2
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 1.7e-07 60.1 86 47.7
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 1.7e-07 60.1 87 48.3
Gohir.A01G222700 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.2e-07 59.7 80 46.2
Thecc.05G040600 Theobroma cacao HOM05D005967 ORTHO05D005174 3.8e-07 58.9 85 45.9
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 4.9e-07 58.5 92 44.6
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 6.4e-07 58.2 85 40.0
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 6.4e-07 58.2 83 42.2
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 1.1e-06 57.4 85 38.8
Cfa017389 Carpinus fangiana HOM05D005967 ORTHO05D005174 1.1e-06 57.4 83 44.6
DCAR_020849 Daucus carota HOM05D005967 ORTHO05D005174 1.1e-06 57.4 103 36.9
Gohir.A04G082200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.1e-06 57.4 79 49.4
Oeu007791.1 Olea europaea HOM05D005967 ORTHO05D005174 1.4e-06 57.0 90 41.1
Actinidia23945 Actinidia chinensis HOM05D005967 ORTHO05D005174 1.9e-06 56.6 71 42.3
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 1.9e-06 56.6 71 46.5
Eucgr.A01260 Eucalyptus grandis HOM05D005967 ORTHO05D005174 1.9e-06 56.6 84 44.0
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.4e-06 56.2 83 41.0
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 3.2e-06 55.8 81 44.4
MSTRG.5669 Avicennia marina HOM05D005967 ORTHO05D005174 4.2e-06 55.5 97 41.2
Duzib106G1613 Durio zibethinus HOM05D005967 ORTHO05D005174 4.2e-06 55.5 84 44.0
Gohir.D07G102400 Gossypium hirsutum HOM05D005967 ORTHO05D005174 4.2e-06 55.5 83 41.0
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 4.2e-06 55.5 85 42.4
Oeu011403.1 Olea europaea HOM05D005967 ORTHO05D005174 4.2e-06 55.5 86 46.5
Duzib093G0486 Durio zibethinus HOM05D005967 ORTHO05D005174 7.1e-06 54.7 95 40.0
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 7.1e-06 54.7 84 42.9
Sc01g0004310 Simmondsia chinensis HOM05D005967 ORTHO05D005174 7.1e-06 54.7 133 30.8
VMungo1127G0478 Vigna mungo HOM05D014522 ORTHO05D004438 9.2e-06 54.3 108 33.3


User provided reference genes

Program Settings