Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0016634 Sechium edule HOM05D007412 ORTHO05D009313 1.0e-128 463.4 225 100.0
CsaV3_3G012710 Cucumis sativus L. HOM05D007412 ORTHO05D009313 3.7e-107 391.7 227 87.2
MELO3C006482.2 Cucumis melo HOM05D007412 ORTHO05D009313 2.5e-103 379.0 246 78.5
Thecc.04G243600 Theobroma cacao HOM05D007412 ORTHO05D009313 2.0e-84 316.2 217 72.4
COL.COLO4_15765 Corchorus olitorius HOM05D007412 ORTHO05D009313 3.4e-84 315.5 226 70.4
Duzib212G0542 Durio zibethinus HOM05D007412 ORTHO05D009313 3.4e-84 315.5 219 71.7
Eucgr.H00220 Eucalyptus grandis HOM05D007412 ORTHO05D009313 8.3e-83 310.8 218 71.6
GSVIVG01018092001 Vitis vinifera HOM05D007412 ORTHO05D009313 1.1e-82 310.5 223 72.2
Cpa.g.sc58.20 Carica papaya HOM05D007412 ORTHO05D009313 5.4e-82 308.1 218 68.8
Gorai.011G164700 Gossypium raimondii HOM05D007412 ORTHO05D009313 9.2e-82 307.4 219 69.4
Gohir.A10G118720 Gossypium hirsutum HOM05D007412 ORTHO05D009313 2.1e-81 306.2 219 68.9
Gohir.D10G147600 Gossypium hirsutum HOM05D007412 ORTHO05D009313 6.0e-81 304.7 219 68.9
RcHm_v2.0_Chr4g0389531 Rosa chinensis HOM05D007412 ORTHO05D009313 7.8e-81 304.3 226 68.6
FvH4_4g02220 Fragaria vesca HOM05D007412 ORTHO05D009313 3.0e-80 302.4 226 67.7
FAN12G2712 Fragaria x ananassa HOM05D007412 ORTHO05D009313 3.0e-80 302.4 226 67.7
THA.LOC104826067 Tarenaya hassleriana HOM05D007412 ORTHO05D009313 5.6e-79 298.1 225 64.4
SalBow2G0207 Salvia bowleyana HOM05D007412 ORTHO05D009313 7.3e-79 297.7 213 70.0
CANSAT78G1677 Cannabis sativa HOM05D007412 ORTHO05D009313 1.6e-78 296.6 222 68.0
FAN17G1959 Fragaria x ananassa HOM05D007412 ORTHO05D009313 1.6e-78 296.6 225 67.1
Solyc09g083190.3 Solanum lycopersicum HOM05D007412 ORTHO05D009313 1.6e-78 296.6 222 65.3
Oeu022316.1 Olea europaea HOM05D007412 ORTHO05D009313 2.8e-78 295.8 224 65.2
Prupe.1G026900 Prunus persica HOM05D007412 ORTHO05D009313 1.1e-77 293.9 225 66.2
Sopen09g032110 Solanum pennellii HOM05D007412 ORTHO05D009313 1.4e-77 293.5 222 64.0
EL10Ac6g14279 Beta vulgaris HOM05D007412 ORTHO05D009313 1.8e-77 293.1 224 65.2
Cc00_g20670 Coffea canephora HOM05D007412 ORTHO05D009313 3.1e-77 292.4 191 71.7
Peaxi162Scf01416g00013 Petunia axillaris HOM05D007412 ORTHO05D009313 8.9e-77 290.8 225 64.4
PGSC0003DMG400006085 Solanum tuberosum HOM05D007412 ORTHO05D009313 8.9e-77 290.8 219 64.4
MD11G1069500 Malus domestica HOM05D007412 ORTHO05D009313 2.0e-76 289.7 226 66.4
CARHR179730 Cardamine hirsuta HOM05D007412 ORTHO05D009313 2.6e-76 289.3 221 62.9
CSS0011967 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 4.4e-76 288.5 224 64.7
CSS0029364 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 4.4e-76 288.5 224 64.7
Dinv14073 Davidia involucrata HOM05D007412 ORTHO05D009313 4.4e-76 288.5 220 66.8
Migut.G00414 Erythranthe guttata HOM05D007412 ORTHO05D009313 5.8e-76 288.1 225 65.8
BcaB07g30560 Brassica carinata HOM05D007412 ORTHO05D009313 9.9e-76 287.3 228 61.8
MSTRG.4087 Avicennia marina HOM05D007412 ORTHO05D009313 1.7e-75 286.6 219 64.4
A02p27970 Brassica napus HOM05D007412 ORTHO05D009313 2.2e-75 286.2 228 62.3
Lj6A653T76 Lonicera japonica HOM05D007412 ORTHO05D009313 2.9e-75 285.8 224 64.3
BcaC03g16594 Brassica carinata HOM05D007412 ORTHO05D009313 3.7e-75 285.4 228 61.8
C02p44160 Brassica napus HOM05D007412 ORTHO05D009313 3.7e-75 285.4 228 61.8
BolC2t10457H Brassica oleracea HOM05D007412 ORTHO05D009313 3.7e-75 285.4 228 61.8
Sp2g08560 Schrenkiella parvula HOM05D007412 ORTHO05D009313 3.7e-75 285.4 222 62.2
Dinv44610 Davidia involucrata HOM05D007412 ORTHO05D009313 6.4e-75 284.6 162 82.1
Lsat_1_v5_gn_3_124261 Lactuca sativa HOM05D007412 ORTHO05D009313 6.4e-75 284.6 221 64.7
PSO210G6829 Papaver somniferum HOM05D007412 ORTHO05D009313 6.4e-75 284.6 224 63.8
BraA02t07833Z Brassica rapa HOM05D007412 ORTHO05D009313 8.4e-75 284.3 228 61.8
PSO832G2518 Papaver somniferum HOM05D007412 ORTHO05D009313 8.4e-75 284.3 224 63.8
Manes.15G035500 Manihot esculenta HOM05D007412 ORTHO05D009313 1.1e-74 283.9 219 63.9
Medtr5g042420 Medicago truncatula HOM05D007412 ORTHO05D009313 1.1e-74 283.9 216 63.0
CiPaw.01G192500 Carya illinoinensis HOM05D007412 ORTHO05D009313 1.4e-74 283.5 175 76.0
PGR142G1781 Punica granatum HOM05D007412 ORTHO05D009313 1.9e-74 283.1 223 65.5
Ca_12212_v3 Cicer arietinum L. HOM05D007412 ORTHO05D009313 4.1e-74 282.0 163 75.5
Potri.010G078800 Populus trichocarpa HOM05D007412 ORTHO05D009313 4.1e-74 282.0 219 63.0
HanXRQChr03g0092521 Helianthus annuus HOM05D007412 ORTHO05D009313 7.1e-74 281.2 167 75.4
QL06p015027 Quercus lobata HOM05D007412 ORTHO05D009313 9.2e-74 280.8 225 64.4
VMungo0720G2555 Vigna mungo HOM05D007412 ORTHO05D009313 1.2e-73 280.4 163 76.7
Lj6g0001594 Lotus japonicus HOM05D007412 ORTHO05D009313 1.6e-73 280.0 224 60.7
arahy.Tifrunner.gnm1.ann1.7ZK5QJ Arachis hypogaea HOM05D007412 ORTHO05D009313 6.0e-73 278.1 226 62.4
ECA240G0358 Erigeron canadensis HOM05D007412 ORTHO05D009313 6.0e-73 278.1 165 77.6
Thhalv10003269m.g Eutrema salsugineum HOM05D007412 ORTHO05D009313 1.3e-72 276.9 221 60.2
unitig_747.g21682 Utricularia gibba HOM05D002547 ORTHO05D009313 5.1e-72 275.0 221 62.4
AL8G16510 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 5.6e-71 271.6 217 63.1
arahy.Tifrunner.gnm1.ann1.VMTG6G Arachis hypogaea HOM05D007412 ORTHO05D009313 5.6e-71 271.6 223 61.4
Nn1g02544 Nelumbo nucifera HOM05D007412 ORTHO05D009313 5.6e-71 271.6 219 62.6
AL37U10020 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 7.3e-71 271.2 217 61.3
Ciclev10005847m.g Citrus clementina HOM05D007412 ORTHO05D009313 7.3e-71 271.2 222 64.0
TAR362G0694 Trochodendron aralioides HOM05D007412 ORTHO05D009313 9.6e-71 270.8 217 64.1
Psat6g102120 Pisum sativum HOM05D007412 ORTHO05D009313 1.2e-70 270.4 204 60.8
AT5G43750 Arabidopsis thaliana HOM05D007412 ORTHO05D009313 1.6e-70 270.0 160 75.6
Rhsim04G0195000 Rhododendron simsii HOM05D007412 ORTHO05D009313 2.1e-70 269.6 218 62.8
Sabra10G0064500 Salix brachista HOM05D007412 ORTHO05D009313 2.1e-70 269.6 219 60.7
Carub.0008s0489 Capsella rubella HOM05D007412 ORTHO05D009313 3.6e-70 268.9 216 61.6
Glyma.10G000900 Glycine max HOM05D007412 ORTHO05D009313 6.8e-69 264.6 164 73.2
Haze_11268 Corylus avellana HOM05D007412 ORTHO05D009313 8.9e-69 264.2 218 62.4
Phvul.007G280100 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 2.0e-68 263.1 162 71.0
Aqoxy5G00362 Aquilegia oxysepala HOM05D007412 ORTHO05D009313 5.8e-68 261.5 225 58.2
vmacro08398 Vaccinium macrocarpon HOM05D007412 ORTHO05D009313 5.4e-66 255.0 218 61.5
Lalb_Chr01g0020811 Lupinus albus HOM05D007412 ORTHO05D009313 6.0e-65 251.5 221 57.0
Ah.03g138430 Amaranthus hybridus HOM05D007412 ORTHO05D009313 3.0e-64 249.2 151 76.8
Os01g0929100 Oryza sativa ssp. japonica HOM05D007412 ORTHO05D009313 5.1e-64 248.4 162 70.4
ATR0665G092 Amborella trichopoda HOM05D007412 ORTHO05D009313 5.6e-63 245.0 221 55.7
FAN22G2201 Fragaria x ananassa HOM05D007412 ORTHO05D009313 7.3e-63 244.6 326 46.3
MBI11_g15916_MAGBIO Magnolia biondii HOM05D007412 ORTHO05D009313 3.6e-62 242.3 204 58.3
Zm00001eb142440 Zea mays HOM05D007412 ORTHO05D009313 6.9e-61 238.0 225 56.4
ClCG05G004710 Citrullus lanatus HOM05D000055 ORTHO05D000057 6.4e-59 231.5 217 62.2
CDE06G0695 Ceratophyllum demersum HOM05D007412 ORTHO05D009313 4.6e-57 225.3 219 53.0
Glyma.19G263800 Glycine max HOM05D007412 ORTHO05D009313 2.3e-56 223.0 127 77.2
DCAR_030707 Daucus carota HOM05D007412 ORTHO05D009313 1.6e-54 216.9 218 53.7
Nitab4.5_0010243g0010 Nicotiana tabacum HOM05D007412 ORTHO05D009313 2.0e-52 209.9 222 52.3
AUR62002782 Chenopodium quinoa HOM05D007412 ORTHO05D009313 7.6e-52 208.0 101 91.1
AUR62014099 Chenopodium quinoa HOM05D007412 ORTHO05D009313 6.4e-51 204.9 101 90.1
Nitab4.5_0000525g0020 Nicotiana tabacum HOM05D007412 ORTHO05D009313 1.6e-46 190.3 117 77.8
Glyma.02G000300 Glycine max HOM05D007412 ORTHO05D009313 1.2e-44 184.1 108 75.9
Phvul.006G006300 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 4.5e-44 182.2 162 56.8
SEGI_16394 Sequoiadendron giganteum HOM05D007412 ORTHO05D009313 1.8e-40 170.2 159 55.3
TPR.G4008 Trifolium pratense HOM05D007412 ORTHO05D009313 2.2e-35 153.3 148 53.4
TWI73G0547 Tripterygium wilfordii HOM05D007412 ORTHO05D009313 6.3e-30 135.2 146 50.7
Hund25023 Selenicereus undatus HOM05D007412 ORTHO05D009313 2.9e-27 126.3 75 76.0
Actinidia40098 Actinidia chinensis HOM05D007412 ORTHO05D009313 6.1e-25 118.6 118 50.8
Pp3c21_10470 Physcomitrium patens HOM05D007412 ORTHO05D009313 5.9e-20 102.1 147 42.2
SMO137G0197 Selaginella moellendorffii HOM05D007412 ORTHO05D009313 1.0e-19 101.3 155 39.4
Aa31LG2G9890 Aethionema arabicum HOM05D007412 ORTHO05D009313 1.1e-18 97.8 124 41.9
AagrBONN_evm.TU.Sc2ySwM_228.2018 Anthoceros agrestis HOM05D007412 ORTHO05D009313 1.4e-18 97.4 135 43.7
Eucgr.F02062 Eucalyptus grandis HOM05D007412 ORTHO05D009313 4.8e-14 82.4 40 87.5
Mapoly0063s0063 Marchantia polymorpha HOM05D007412 ORTHO05D009313 5.3e-13 79.0 179 33.0


User provided reference genes

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