Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0016611 Sechium edule HOM05D006711 ORTHO05D008104 7.5e-36 153.3 76 100.0
ClCG01G014050 Citrullus lanatus HOM05D006711 ORTHO05D008104 7.3e-31 136.7 83 84.3
CsaV3_1G008300 Cucumis sativus L. HOM05D006711 ORTHO05D008104 8.0e-30 133.3 83 81.9
MELO3C002246.2 Cucumis melo HOM05D006711 ORTHO05D008104 1.1e-29 132.9 83 81.9
Gohir.D12G276600 Gossypium hirsutum HOM05D006711 ORTHO05D008104 2.4e-26 121.7 83 74.7
Gohir.A12G275900 Gossypium hirsutum HOM05D006711 ORTHO05D008104 4.1e-26 120.9 83 74.7
Gorai.008G297100 Gossypium raimondii HOM05D006711 ORTHO05D008104 4.1e-26 120.9 83 74.7
Manes.14G068400 Manihot esculenta HOM05D006711 ORTHO05D008104 4.1e-26 120.9 82 72.0
Medtr4g106700 Medicago truncatula HOM05D006711 ORTHO05D008104 1.2e-25 119.4 83 73.5
Sabra15G0097500 Salix brachista HOM05D006711 ORTHO05D008104 3.5e-25 117.9 80 73.8
CANSAT11G1423 Cannabis sativa HOM05D006711 ORTHO05D008104 6.0e-25 117.1 83 71.1
Thecc.03G007500 Theobroma cacao HOM05D006711 ORTHO05D008104 6.0e-25 117.1 81 71.6
Cfa019085 Carpinus fangiana HOM05D006711 ORTHO05D008104 7.8e-25 116.7 80 73.8
Duzib068G0631 Durio zibethinus HOM05D006711 ORTHO05D008104 1.0e-24 116.3 81 71.6
THA.LOC104821460 Tarenaya hassleriana HOM05D006711 ORTHO05D008104 1.0e-24 116.3 80 71.2
Ca_21901_v3 Cicer arietinum L. HOM05D006711 ORTHO05D008104 1.3e-24 115.9 83 68.7
Potri.012G078000 Populus trichocarpa HOM05D006711 ORTHO05D008104 1.3e-24 115.9 80 71.2
Potri.015G073300 Populus trichocarpa HOM05D006711 ORTHO05D008104 1.3e-24 115.9 80 71.2
Duzib084G0075 Durio zibethinus HOM05D006711 ORTHO05D008104 1.7e-24 115.5 83 71.1
TWI15G0492 Tripterygium wilfordii HOM05D006711 ORTHO05D008104 1.7e-24 115.5 77 74.0
PGR044G2080 Punica granatum HOM05D006711 ORTHO05D008104 2.3e-24 115.2 82 70.7
Thhalv10010870m.g Eutrema salsugineum HOM05D006711 ORTHO05D008104 3.0e-24 114.8 80 70.0
MD06G1177900 Malus domestica HOM05D006711 ORTHO05D008104 3.0e-24 114.8 82 69.5
THA.LOC104798980 Tarenaya hassleriana HOM05D000086 ORTHO05D008104 3.0e-24 114.8 80 72.5
Aa31LG11G810 Aethionema arabicum HOM05D006711 ORTHO05D008104 3.9e-24 114.4 80 72.5
Aa31LG4G16690 Aethionema arabicum HOM05D006711 ORTHO05D008104 3.9e-24 114.4 80 70.0
AL5G27360 Arabidopsis lyrata HOM05D006711 ORTHO05D008104 3.9e-24 114.4 80 70.0
CARHR156770 Cardamine hirsuta HOM05D006711 ORTHO05D008104 3.9e-24 114.4 80 70.0
Cpa.g.sc134.10 Carica papaya HOM05D006711 ORTHO05D008104 3.9e-24 114.4 83 69.9
FvH4_5g05020 Fragaria vesca HOM05D006711 ORTHO05D008104 3.9e-24 114.4 83 69.9
FAN04G0211 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.9e-24 114.4 83 69.9
FAN08G2471 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.9e-24 114.4 83 69.9
FAN18G2156 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.9e-24 114.4 83 69.9
Psat4g057240 Pisum sativum HOM05D006711 ORTHO05D008104 3.9e-24 114.4 83 69.9
FAN13G1278 Fragaria x ananassa HOM05D006711 ORTHO05D008104 5.0e-24 114.0 83 69.9
FAN18G1479 Fragaria x ananassa HOM05D006711 ORTHO05D008104 5.0e-24 114.0 83 69.9
TPR.G37552 Trifolium pratense HOM05D006711 ORTHO05D008104 5.0e-24 114.0 81 69.1
BcaB01g00848 Brassica carinata HOM05D006711 ORTHO05D008104 6.6e-24 113.6 80 70.0
BcaC07g39289 Brassica carinata HOM05D006711 ORTHO05D008104 6.6e-24 113.6 80 70.0
A06p19610 Brassica napus HOM05D006711 ORTHO05D008104 6.6e-24 113.6 80 70.0
C08p22960 Brassica napus HOM05D006711 ORTHO05D008104 6.6e-24 113.6 80 70.0
BolC8t49933H Brassica oleracea HOM05D006711 ORTHO05D008104 6.6e-24 113.6 80 70.0
BraA06t25041Z Brassica rapa HOM05D006711 ORTHO05D008104 6.6e-24 113.6 80 70.0
Atru.chr9.2428 Acer truncatum HOM05D006711 ORTHO05D008104 8.6e-24 113.2 83 69.9
arahy.Tifrunner.gnm1.ann1.5NY27E Arachis hypogaea HOM05D006711 ORTHO05D008104 8.6e-24 113.2 81 70.4
Sp5g13950 Schrenkiella parvula HOM05D006711 ORTHO05D008104 8.6e-24 113.2 80 68.8
MD14G1184500 Malus domestica HOM05D006711 ORTHO05D008104 1.1e-23 112.8 80 70.0
Sed0004980 Sechium edule HOM05D006711 ORTHO05D008104 2.5e-23 111.7 83 69.9
Eucgr.K02867 Eucalyptus grandis HOM05D006711 ORTHO05D008104 3.3e-23 111.3 81 67.9
CiPaw.12G024900 Carya illinoinensis HOM05D006711 ORTHO05D008104 7.3e-23 110.2 93 61.3
Ciclev10023110m.g Citrus clementina HOM05D006711 ORTHO05D008104 7.3e-23 110.2 79 70.9
Sabra12G0055800 Salix brachista HOM05D006711 ORTHO05D008104 7.3e-23 110.2 80 67.5
Glyma.05G035600 Glycine max HOM05D006711 ORTHO05D008104 9.5e-23 109.8 70 81.4
Phvul.003G198200 Phaseolus vulgaris HOM05D006711 ORTHO05D008104 9.5e-23 109.8 70 81.4
Lj4g0001750 Lotus japonicus HOM05D006711 ORTHO05D008104 1.2e-22 109.4 81 67.9
COL.COLO4_24770 Corchorus olitorius HOM05D006711 ORTHO05D008104 1.6e-22 109.0 81 66.7
Prupe.5G177100 Prunus persica HOM05D006711 ORTHO05D008104 2.1e-22 108.6 82 64.6
Ah.10g035450 Amaranthus hybridus HOM05D006711 ORTHO05D008104 8.1e-22 106.7 77 72.7
Sc04g0001970 Simmondsia chinensis HOM05D006711 ORTHO05D008104 1.4e-21 105.9 76 73.7
AUR62031000 Chenopodium quinoa HOM05D006711 ORTHO05D008104 8.9e-21 103.2 77 70.1
Hund09419 Selenicereus undatus HOM05D006711 ORTHO05D008104 1.2e-20 102.8 77 70.1
EL10Ac5g10797 Beta vulgaris HOM05D006711 ORTHO05D008104 4.4e-20 100.9 76 68.4
DCAR_011220 Daucus carota HOM05D006711 ORTHO05D008104 4.4e-20 100.9 76 68.4
Aqoxy3G00948 Aquilegia oxysepala HOM05D006711 ORTHO05D008104 9.9e-20 99.8 75 69.3
Hma1.2p1_0697F.1_g204840 Hydrangea macrophylla HOM05D006711 ORTHO05D008104 1.7e-19 99.0 76 68.4
PSO063G1690 Papaver somniferum HOM05D006711 ORTHO05D008104 2.2e-19 98.6 77 61.0
PSO832G1815 Papaver somniferum HOM05D006711 ORTHO05D008104 2.2e-19 98.6 77 61.0
Oeu059193.1 Olea europaea HOM05D006711 ORTHO05D008104 6.4e-19 97.1 76 67.1
CDE10G0118 Ceratophyllum demersum HOM05D001322 ORTHO05D001301 8.3e-19 96.7 80 62.5
Migut.N03365 Erythranthe guttata HOM05D006711 ORTHO05D008104 8.3e-19 96.7 76 65.8
PSO478G1559 Papaver somniferum HOM05D006711 ORTHO05D008104 1.9e-18 95.5 76 64.5
Lsat_1_v5_gn_4_181601 Lactuca sativa HOM05D006711 ORTHO05D008104 2.4e-18 95.1 71 71.8
Actinidia33966 Actinidia chinensis HOM05D006711 ORTHO05D008104 5.4e-18 94.0 76 64.5
CDE10G0426 Ceratophyllum demersum HOM05D006711 ORTHO05D008104 5.4e-18 94.0 71 66.2
MBI15_g24174_MAGBIO Magnolia biondii HOM05D006711 ORTHO05D008104 5.4e-18 94.0 69 69.6
SalBow6G5258 Salvia bowleyana HOM05D006711 ORTHO05D008104 5.4e-18 94.0 76 65.8
PSO017G6527 Papaver somniferum HOM05D006711 ORTHO05D008104 9.2e-18 93.2 76 64.5
HanXRQChr09g0265981 Helianthus annuus HOM05D006711 ORTHO05D008104 1.2e-17 92.8 71 69.0
RcHm_v2.0_Chr7g0194021 Rosa chinensis HOM05D006711 ORTHO05D008104 1.6e-17 92.4 51 88.2
Sopen11g029530 Solanum pennellii HOM05D006711 ORTHO05D008104 1.6e-17 92.4 77 63.6
ATR1149G012 Amborella trichopoda HOM05D006711 ORTHO05D008104 2.1e-17 92.0 68 72.1
Oeu047317.1 Olea europaea HOM05D006711 ORTHO05D008104 2.7e-17 91.7 76 61.8
Peaxi162Scf00429g00118 Petunia axillaris HOM05D006711 ORTHO05D008104 2.7e-17 91.7 77 61.0
Cc07_g02450 Coffea canephora HOM05D006711 ORTHO05D008104 3.5e-17 91.3 76 64.5
vmacro05808 Vaccinium macrocarpon HOM05D006711 ORTHO05D008104 6.0e-17 90.5 76 63.2
HPP92_010905 Vanilla planifolia HOM05D006711 ORTHO05D008104 1.0e-16 89.7 76 61.8
HPP92_010907 Vanilla planifolia HOM05D006711 ORTHO05D008104 1.0e-16 89.7 76 61.8
GSVIVG01032507001 Vitis vinifera HOM05D006711 ORTHO05D008104 1.0e-16 89.7 76 59.2
Oeu006591.3 Olea europaea HOM05D006711 ORTHO05D008104 1.3e-16 89.4 99 52.5
Haze_07479 Corylus avellana HOM05D006711 ORTHO05D008104 1.7e-16 89.0 48 89.6
GSVIVG01007800001 Vitis vinifera HOM05D006711 ORTHO05D008104 1.7e-16 89.0 69 63.8
CAN.G742.33 Capsicum annuum HOM05D006711 ORTHO05D008104 2.3e-16 88.6 77 59.7
CiPaw.11G029900 Carya illinoinensis HOM05D006711 ORTHO05D008104 2.3e-16 88.6 67 70.1
Nitab4.5_0002792g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 2.3e-16 88.6 77 59.7
Nitab4.5_0004762g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 2.3e-16 88.6 77 59.7
unitig_46.g17997 Utricularia gibba HOM05D006711 ORTHO05D008104 3.9e-16 87.8 95 52.6
AUR62008246 Chenopodium quinoa HOM05D001451 ORTHO05D008104 6.6e-16 87.0 68 69.1
Os09g0375900 Oryza sativa ssp. japonica HOM05D006711 ORTHO05D008104 8.6e-16 86.7 69 68.1
Lalb_Chr12g0201501 Lupinus albus HOM05D006711 ORTHO05D008104 1.1e-15 86.3 67 68.7
QL10p013547 Quercus lobata HOM05D006711 ORTHO05D008104 1.1e-15 86.3 49 81.6
Zm00001eb311470 Zea mays HOM05D006711 ORTHO05D008104 1.1e-15 86.3 71 64.8
HanXRQChr12g0385511 Helianthus annuus HOM05D006711 ORTHO05D008104 5.6e-15 84.0 76 59.2
Carub.0005s1414 Capsella rubella HOM05D000086 ORTHO05D008104 7.3e-15 83.6 68 63.2
PGSC0003DMG400003004 Solanum tuberosum HOM05D006711 ORTHO05D008104 1.8e-13 79.0 45 84.4
CSS0024346 Camellia sinensis var. sinensis HOM05D006711 ORTHO05D008104 4.0e-13 77.8 44 86.4
Rhsim10G0024900 Rhododendron simsii HOM05D006711 ORTHO05D008104 6.8e-13 77.0 44 86.4
SEGI_30617 Sequoiadendron giganteum HOM05D006711 ORTHO05D008104 2.6e-12 75.1 73 53.4
Eucgr.J02179 Eucalyptus grandis HOM05D006711 ORTHO05D008104 3.4e-12 74.7 66 60.6
Rhsim10G0024700 Rhododendron simsii HOM05D006711 ORTHO05D008104 3.4e-12 74.7 44 84.1
TAR622G0690 Trochodendron aralioides HOM05D001464 ORTHO05D002836 3.4e-12 74.7 61 63.9
Nn4g22854 Nelumbo nucifera HOM05D006711 ORTHO05D008104 8.4e-11 70.1 60 63.3
Pp3c14_16830 Physcomitrium patens HOM05D006711 ORTHO05D008104 9.2e-10 66.6 72 48.6
Rhsim08G0056600 Rhododendron simsii HOM05D000086 ORTHO05D000983 2.7e-09 65.1 78 50.0
Mapoly0124s0028 Marchantia polymorpha HOM05D006711 ORTHO05D008104 1.0e-08 63.2 67 50.7
CBR_g49624 Chara braunii HOM05D006711 ORTHO05D008104 1.3e-08 62.8 65 53.8
ATR0820G148 Amborella trichopoda HOM05D006711 ORTHO05D008104 3.9e-08 61.2 69 55.1
HPP92_016979 Vanilla planifolia HOM05D006711 ORTHO05D008104 5.1e-08 60.8 35 85.7
Pp3c3_16770 Physcomitrium patens HOM05D006711 ORTHO05D008104 1.9e-07 58.9 62 56.5
AagrBONN_evm.TU.Sc2ySwM_368.1224 Anthoceros agrestis HOM05D006711 ORTHO05D008104 2.5e-07 58.5 62 56.5
ATR0661G003 Amborella trichopoda HOM05D006711 ORTHO05D008104 1.2e-06 56.2 59 57.6
PRCOL_00004863 Prasinoderma coloniale HOM05D006711 ORTHO05D008104 1.2e-06 56.2 73 43.8


User provided reference genes

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