Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0016543 Sechium edule HOM05D007565 ORTHO05D009551 1.0e-84 316.6 153 100.0
ClCG07G016310 Citrullus lanatus HOM05D007565 ORTHO05D009551 4.8e-58 228.0 162 71.6
CsaV3_4G009160 Cucumis sativus L. HOM05D007565 ORTHO05D009551 1.4e-49 199.9 165 63.6
MELO3C024877.2 Cucumis melo HOM05D007565 ORTHO05D009551 1.1e-46 190.3 161 62.7
Dinv33829 Davidia involucrata HOM05D007565 ORTHO05D009551 5.4e-33 144.8 100 66.0
Cpa.g.sc14.177 Carica papaya HOM05D007565 ORTHO05D009551 3.5e-32 142.1 94 71.3
CSS0012139 Camellia sinensis var. sinensis HOM05D007565 ORTHO05D009551 5.9e-32 141.4 100 65.0
ECA238G4035 Erigeron canadensis HOM05D007565 ORTHO05D009551 2.3e-31 139.4 99 65.7
HanXRQChr07g0199761 Helianthus annuus HOM05D007565 ORTHO05D009551 3.9e-31 138.7 99 64.6
Manes.01G096100 Manihot esculenta HOM05D007565 ORTHO05D009551 6.6e-31 137.9 97 67.0
DCAR_025432 Daucus carota HOM05D007565 ORTHO05D009551 1.1e-30 137.1 144 50.7
CANSAT64G0913 Cannabis sativa HOM05D007565 ORTHO05D009551 1.5e-30 136.7 93 67.7
CiPaw.04G055600 Carya illinoinensis HOM05D007565 ORTHO05D009551 1.5e-30 136.7 100 63.0
GSVIVG01032907001 Vitis vinifera HOM05D007565 ORTHO05D009551 1.5e-30 136.7 100 62.0
Cc07_g04240 Coffea canephora HOM05D007565 ORTHO05D009551 1.9e-30 136.3 167 47.3
PGSC0003DMG400025155 Solanum tuberosum HOM05D007565 ORTHO05D009551 1.9e-30 136.3 96 65.6
TWI60G0367 Tripterygium wilfordii HOM05D007565 ORTHO05D009551 2.5e-30 136.0 97 62.9
Psat1g068880 Pisum sativum HOM05D007565 ORTHO05D009551 3.3e-30 135.6 96 64.6
Lalb_Chr02g0158911 Lupinus albus HOM05D007565 ORTHO05D009551 4.3e-30 135.2 100 61.0
Solyc02g066920.3 Solanum lycopersicum HOM05D007565 ORTHO05D009551 4.3e-30 135.2 96 63.5
Eucgr.I02035 Eucalyptus grandis HOM05D007565 ORTHO05D009551 5.6e-30 134.8 156 48.1
TPR.G10009 Trifolium pratense HOM05D007565 ORTHO05D009551 9.5e-30 134.0 96 62.5
Gohir.A09G009400 Gossypium hirsutum HOM05D007565 ORTHO05D009551 1.2e-29 133.7 104 62.5
Gohir.D09G008500 Gossypium hirsutum HOM05D007565 ORTHO05D009551 1.2e-29 133.7 104 62.5
Gorai.006G010200 Gossypium raimondii HOM05D007565 ORTHO05D009551 1.2e-29 133.7 104 62.5
RcHm_v2.0_Chr2g0165831 Rosa chinensis HOM05D007565 ORTHO05D009551 1.2e-29 133.7 154 47.4
Actinidia17585 Actinidia chinensis HOM05D007565 ORTHO05D009551 1.6e-29 133.3 93 66.7
arahy.Tifrunner.gnm1.ann1.GE184H Arachis hypogaea HOM05D007565 ORTHO05D009551 1.6e-29 133.3 114 54.4
Carub.0007s3671 Capsella rubella HOM05D007565 ORTHO05D009551 1.6e-29 133.3 160 46.2
Lj2g0002665 Lotus japonicus HOM05D007565 ORTHO05D009551 1.6e-29 133.3 114 57.9
SalBow1G1387 Salvia bowleyana HOM05D007565 ORTHO05D009551 1.6e-29 133.3 99 65.7
SalBow1G4541 Salvia bowleyana HOM05D007565 ORTHO05D009551 1.6e-29 133.3 99 65.7
arahy.Tifrunner.gnm1.ann1.X5N52Z Arachis hypogaea HOM05D007565 ORTHO05D009551 2.1e-29 132.9 114 53.5
CAN.G398.21 Capsicum annuum HOM05D007565 ORTHO05D009551 2.1e-29 132.9 96 64.6
Sabra04G0069500 Salix brachista HOM05D007565 ORTHO05D009551 3.6e-29 132.1 93 64.5
Sopen02g016110 Solanum pennellii HOM05D007565 ORTHO05D009551 3.6e-29 132.1 96 62.5
AT5G39210 Arabidopsis thaliana HOM05D007565 ORTHO05D009551 4.7e-29 131.7 100 61.0
BcaB06g27735 Brassica carinata HOM05D007565 ORTHO05D009551 4.7e-29 131.7 100 65.0
Haze_14429 Corylus avellana HOM05D007565 ORTHO05D009551 4.7e-29 131.7 100 62.0
Migut.H00623 Erythranthe guttata HOM05D007565 ORTHO05D009551 4.7e-29 131.7 103 63.1
Potri.004G120300 Populus trichocarpa HOM05D007565 ORTHO05D009551 4.7e-29 131.7 93 63.4
Lsat_1_v5_gn_2_90121 Lactuca sativa HOM05D007565 ORTHO05D009551 6.2e-29 131.3 88 70.5
MD09G1066900 Malus domestica HOM05D007565 ORTHO05D009551 6.2e-29 131.3 93 64.5
Peaxi162Scf00991g00215 Petunia axillaris HOM05D007565 ORTHO05D009551 6.2e-29 131.3 110 59.1
vmacro18148 Vaccinium macrocarpon HOM05D007565 ORTHO05D009551 6.2e-29 131.3 97 63.9
MSTRG.2997 Avicennia marina HOM05D007565 ORTHO05D009551 8.0e-29 131.0 93 66.7
Glyma.19G030200 Glycine max HOM05D007565 ORTHO05D009551 8.0e-29 131.0 117 59.0
Sp7g02770 Schrenkiella parvula HOM05D007565 ORTHO05D009551 8.0e-29 131.0 100 65.0
EL10Ac2g02475 Beta vulgaris HOM05D007565 ORTHO05D009551 1.0e-28 130.6 115 59.1
BcaC02g08856 Brassica carinata HOM05D007565 ORTHO05D009551 1.0e-28 130.6 102 61.8
C04p49800 Brassica napus HOM05D007565 ORTHO05D009551 1.0e-28 130.6 102 61.8
BolC4t26571H Brassica oleracea HOM05D007565 ORTHO05D009551 1.0e-28 130.6 102 61.8
Thhalv10027973m.g Eutrema salsugineum HOM05D007565 ORTHO05D009551 1.4e-28 130.2 100 64.0
A04p15530 Brassica napus HOM05D007565 ORTHO05D009551 1.8e-28 129.8 100 63.0
BraA04t17189Z Brassica rapa HOM05D007565 ORTHO05D009551 1.8e-28 129.8 100 63.0
Lju41C3T7 Lonicera japonica HOM05D007565 ORTHO05D009551 1.8e-28 129.8 88 70.5
Nitab4.5_0002957g0030 Nicotiana tabacum HOM05D000753 ORTHO05D003622 1.8e-28 129.8 96 62.5
Phvul.004G037200 Phaseolus vulgaris HOM05D007565 ORTHO05D009551 1.8e-28 129.8 97 63.9
AUR62018189 Chenopodium quinoa HOM05D007565 ORTHO05D009551 2.3e-28 129.4 91 68.1
MBI16_g10827_MAGBIO Magnolia biondii HOM05D007565 ORTHO05D009551 2.3e-28 129.4 93 65.6
Prupe.3G254800 Prunus persica HOM05D007565 ORTHO05D009551 2.3e-28 129.4 157 47.1
ATR0177G044 Amborella trichopoda HOM05D007565 ORTHO05D009551 3.1e-28 129.0 101 62.4
FAN09G3824 Fragaria x ananassa HOM05D007565 ORTHO05D009551 3.1e-28 129.0 109 56.9
PGR004G0757 Punica granatum HOM05D007565 ORTHO05D009551 4.0e-28 128.6 100 58.0
FvH4_6g46840 Fragaria vesca HOM05D007565 ORTHO05D009551 5.2e-28 128.3 154 43.5
Rhsim08G0074900 Rhododendron simsii HOM05D007565 ORTHO05D009551 5.2e-28 128.3 100 61.0
VMungo0464G0770 Vigna mungo HOM05D007565 ORTHO05D009551 5.2e-28 128.3 93 65.6
Aa31LG9G16710 Aethionema arabicum HOM05D007565 ORTHO05D009551 6.8e-28 127.9 95 64.2
Os01g0763700 Oryza sativa ssp. japonica HOM05D007565 ORTHO05D009551 8.9e-28 127.5 84 69.0
Cfa007669 Carpinus fangiana HOM05D007565 ORTHO05D009551 1.2e-27 127.1 100 61.0
AUR62038674 Chenopodium quinoa HOM05D007565 ORTHO05D009551 1.5e-27 126.7 91 65.9
FAN02G0614 Fragaria x ananassa HOM05D007565 ORTHO05D009551 1.5e-27 126.7 109 56.0
FAN14G1390 Fragaria x ananassa HOM05D007565 ORTHO05D009551 1.5e-27 126.7 109 56.0
QL02p067580 Quercus lobata HOM05D007565 ORTHO05D009551 2.0e-27 126.3 90 66.7
TAR371G0975 Trochodendron aralioides HOM05D007565 ORTHO05D009551 2.0e-27 126.3 96 61.5
CARHR263200 Cardamine hirsuta HOM05D007565 ORTHO05D009551 2.6e-27 125.9 100 58.0
FAN05G3080 Fragaria x ananassa HOM05D007565 ORTHO05D009551 2.6e-27 125.9 110 56.4
Aqoxy3G00508 Aquilegia oxysepala HOM05D007565 ORTHO05D009551 3.4e-27 125.6 94 63.8
Nitab4.5_0000212g0260 Nicotiana tabacum HOM05D000753 ORTHO05D003622 3.4e-27 125.6 88 63.6
AL7G51250 Arabidopsis lyrata HOM05D007565 ORTHO05D009551 4.4e-27 125.2 101 60.4
unitig_736.g22275 Utricularia gibba HOM05D007565 ORTHO05D009551 1.3e-26 123.6 93 65.6
CDE10G0935 Ceratophyllum demersum HOM05D007565 ORTHO05D009551 2.2e-26 122.9 101 58.4
THA.LOC104822868 Tarenaya hassleriana HOM05D007565 ORTHO05D009551 4.9e-26 121.7 99 58.6
Atru.chr8.429 Acer truncatum HOM05D007565 ORTHO05D009551 6.4e-26 121.3 94 62.8
Nn4g23433 Nelumbo nucifera HOM05D007565 ORTHO05D009551 8.3e-26 120.9 91 62.6
PSO478G3761 Papaver somniferum HOM05D007565 ORTHO05D009551 1.4e-25 120.2 92 62.0
EL10Ac2g03143 Beta vulgaris HOM05D007565 ORTHO05D009551 3.2e-25 119.0 79 69.6
Ciclev10012981m.g Citrus clementina HOM05D007565 ORTHO05D009551 1.2e-24 117.1 141 44.7
COL.COLO4_04935 Corchorus olitorius HOM05D007565 ORTHO05D009551 3.5e-24 115.5 75 68.0
SMO133G0016 Selaginella moellendorffii HOM05D007565 ORTHO05D009551 2.0e-19 99.8 80 58.8
BcaC02g08855 Brassica carinata HOM05D007565 ORTHO05D009551 3.4e-19 99.0 101 52.5
BcaC02g08857 Brassica carinata HOM05D007565 ORTHO05D009551 3.4e-19 99.0 101 52.5
Pp3c15_1410 Physcomitrium patens HOM05D007565 ORTHO05D009551 3.4e-19 99.0 132 42.4
Mapoly0001s0042 Marchantia polymorpha HOM05D007565 ORTHO05D009551 7.5e-19 97.8 81 54.3
Medtr6g015250 Medicago truncatula HOM05D007565 ORTHO05D009551 3.2e-17 92.4 80 52.5
Medtr6g015275 Medicago truncatula HOM05D007565 ORTHO05D009551 3.2e-17 92.4 74 56.8
SEGI_38587 Sequoiadendron giganteum HOM05D007565 ORTHO05D009551 9.2e-17 90.9 109 42.2
AagrBONN_evm.TU.Sc2ySwM_362.2072 Anthoceros agrestis HOM05D007565 ORTHO05D009551 7.8e-16 87.8 97 42.3
CDE10G1057 Ceratophyllum demersum HOM05D000058 ORTHO05D000077 6.6e-15 84.7 72 56.9
TPR.G36332 Trifolium pratense HOM05D007565 ORTHO05D009551 1.9e-09 66.6 48 62.5
MBI19_g17444_MAGBIO Magnolia biondii HOM05D000545 ORTHO05D000539 3.2e-09 65.9 55 54.5


User provided reference genes

Program Settings