Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0016533 Sechium edule HOM05D000611 ORTHO05D004334 2.4e-162 575.5 298 100.0
ClCG05G011010 Citrullus lanatus HOM05D000611 ORTHO05D004334 3.8e-75 285.8 372 49.5
MELO3C020280.2 Cucumis melo HOM05D000611 ORTHO05D004334 1.8e-69 266.9 388 47.4
CsaV3_3G021570 Cucumis sativus L. HOM05D000611 ORTHO05D004334 6.9e-69 265.0 388 46.1
Sed0014398 Sechium edule HOM05D000611 ORTHO05D004334 3.6e-57 226.1 424 40.3
Dinv19017 Davidia involucrata HOM05D000611 ORTHO05D004334 2.5e-26 123.6 357 31.9
TWI12G1101 Tripterygium wilfordii HOM05D000611 ORTHO05D004334 2.6e-23 113.6 356 32.0
GSVIVG01030843001 Vitis vinifera HOM05D000611 ORTHO05D004334 2.9e-22 110.2 331 32.9
Hma1.2p1_0283F.1_g113480 Hydrangea macrophylla HOM05D000611 ORTHO05D004334 6.4e-22 109.0 318 31.1
TWI18G1238 Tripterygium wilfordii HOM05D000611 ORTHO05D004334 3.2e-21 106.7 327 31.2
CANSAT78G1071 Cannabis sativa HOM05D000611 ORTHO05D004334 1.2e-20 104.8 297 32.7
Cc07_g08100 Coffea canephora HOM05D000611 ORTHO05D004334 2.7e-20 103.6 361 31.0
Hma1.2p1_0832F.1_g225560 Hydrangea macrophylla HOM05D000611 ORTHO05D004334 3.5e-20 103.2 280 33.9
Thecc.04G119400 Theobroma cacao HOM05D000611 ORTHO05D004334 6.0e-20 102.4 293 30.7
Manes.01G116100 Manihot esculenta HOM05D000611 ORTHO05D004334 1.0e-19 101.7 306 31.0
QL11p002176 Quercus lobata HOM05D000611 ORTHO05D004334 1.3e-19 101.3 278 31.3
Duzib211G0073 Durio zibethinus HOM05D000611 ORTHO05D004334 1.5e-18 97.8 356 30.1
Nitab4.5_0002664g0080 Nicotiana tabacum HOM05D000611 ORTHO05D004334 1.2e-17 94.7 347 30.3
Sabra15G0047000 Salix brachista HOM05D000949 ORTHO05D004334 1.6e-17 94.4 308 28.6
Cfa007833 Carpinus fangiana HOM05D000611 ORTHO05D004334 4.7e-17 92.8 332 27.1
Duzib133G1511 Durio zibethinus HOM05D000611 ORTHO05D004334 4.7e-17 92.8 349 29.2
QL11p039394 Quercus lobata HOM05D000611 ORTHO05D004334 8.1e-17 92.0 318 30.2
Gohir.A12G056200 Gossypium hirsutum HOM05D000611 ORTHO05D004334 1.1e-16 91.7 338 30.5
Phvul.008G234500 Phaseolus vulgaris HOM05D000611 ORTHO05D004334 6.8e-16 89.0 325 27.7
QL11p003934 Quercus lobata HOM05D000611 ORTHO05D004334 1.5e-15 87.8 293 30.7
CSS0050254 Camellia sinensis var. sinensis HOM05D000611 ORTHO05D004334 2.6e-15 87.0 330 28.2
Sabra17G0106600 Salix brachista HOM05D000611 ORTHO05D004334 3.4e-15 86.7 310 28.1
Rhsim03G0037200 Rhododendron simsii HOM05D000611 ORTHO05D004334 5.8e-15 85.9 252 29.8
MD09G1262200 Malus domestica HOM05D000611 ORTHO05D004334 1.3e-14 84.7 311 29.6
Sopen02g036080 Solanum pennellii HOM05D000611 ORTHO05D004334 1.3e-14 84.7 324 29.0
Nitab4.5_0003360g0040 Nicotiana tabacum HOM05D000611 ORTHO05D004334 2.2e-14 84.0 341 26.7
CiPaw.15G093300 Carya illinoinensis HOM05D000611 ORTHO05D004334 2.9e-14 83.6 405 26.4
Ciclev10011836m.g Citrus clementina HOM05D000611 ORTHO05D004334 8.3e-14 82.0 379 26.6
Gorai.008G058500 Gossypium raimondii HOM05D000611 ORTHO05D004334 1.4e-13 81.3 338 29.0
Eucgr.J01547 Eucalyptus grandis HOM05D000611 ORTHO05D004334 2.4e-13 80.5 345 28.7
arahy.Tifrunner.gnm1.ann1.J7PSRM Arachis hypogaea HOM05D000611 ORTHO05D004334 4.1e-13 79.7 327 31.2
Dinv14884 Davidia involucrata HOM05D000611 ORTHO05D004334 7.1e-13 79.0 250 31.2
Gohir.D12G055600 Gossypium hirsutum HOM05D000611 ORTHO05D004334 9.2e-13 78.6 338 28.4
CAN.G1061.46 Capsicum annuum HOM05D000611 ORTHO05D004334 1.6e-12 77.8 343 27.1
Sc10g0000760 Simmondsia chinensis HOM05D000611 ORTHO05D004334 2.7e-12 77.0 279 28.3
Actinidia22792 Actinidia chinensis HOM05D000611 ORTHO05D004334 3.5e-12 76.6 242 29.3
Rhsim08G0086400 Rhododendron simsii HOM05D000611 ORTHO05D004334 3.5e-12 76.6 236 30.1
CSS0039210 Camellia sinensis var. sinensis HOM05D000611 ORTHO05D004334 4.6e-12 76.3 175 33.7
TAR622G0440 Trochodendron aralioides HOM05D000611 ORTHO05D004334 6.0e-12 75.9 238 31.5
TAR374G0184 Trochodendron aralioides HOM05D000611 ORTHO05D004334 1.3e-11 74.7 165 34.5
vmacro22550 Vaccinium macrocarpon HOM05D000611 ORTHO05D004334 2.3e-11 73.9 300 27.3
MSTRG.15320 Avicennia marina HOM05D000611 ORTHO05D004334 3.0e-11 73.6 195 28.2
Actinidia17227 Actinidia chinensis HOM05D000611 ORTHO05D004334 3.9e-11 73.2 254 31.1
Glyma.14G069800 Glycine max HOM05D000611 ORTHO05D004334 6.6e-11 72.4 308 28.6
COL.COLO4_15730 Corchorus olitorius HOM05D000611 ORTHO05D004334 8.6e-11 72.0 289 27.0
Lalb_Chr20g0116941 Lupinus albus HOM05D000611 ORTHO05D004334 8.6e-11 72.0 340 27.1
arahy.Tifrunner.gnm1.ann1.HDGD4N Arachis hypogaea HOM05D000611 ORTHO05D004334 1.1e-10 71.6 195 31.3
THA.LOC104826735 Tarenaya hassleriana HOM05D000611 ORTHO05D004334 1.5e-10 71.2 186 31.7
Nn3g20745 Nelumbo nucifera HOM05D000611 ORTHO05D004334 1.9e-10 70.9 262 29.0
PGR119G2064 Punica granatum HOM05D000611 ORTHO05D004334 1.9e-10 70.9 259 26.6
Nitab4.5_0004028g0020 Nicotiana tabacum HOM05D000611 ORTHO05D004334 2.5e-10 70.5 110 41.8
Hund16210 Selenicereus undatus HOM05D000611 ORTHO05D004334 2.5e-10 70.5 171 28.7
Peaxi162Scf00683g00137 Petunia axillaris HOM05D000611 ORTHO05D004334 7.3e-10 68.9 101 44.6
Haze_14232 Corylus avellana HOM05D000611 ORTHO05D004334 1.6e-09 67.8 59 57.6
SGA_v2.0_scaffold63G21737 Striga asiatica HOM05D000611 ORTHO05D004334 1.6e-09 67.8 312 25.0
Ca_05862_v3 Cicer arietinum L. HOM05D000611 ORTHO05D004334 3.6e-09 66.6 189 30.2
Phvul.008G234400 Phaseolus vulgaris HOM05D000611 ORTHO05D004334 4.7e-09 66.2 178 28.7
Migut.L00463 Erythranthe guttata HOM05D000611 ORTHO05D004334 8.1e-09 65.5 169 26.6
EL10Ac2g04473 Beta vulgaris HOM05D000611 ORTHO05D004334 1.1e-08 65.1 331 26.3
Peaxi162Scf00003g00219 Petunia axillaris HOM05D000611 ORTHO05D004334 1.4e-08 64.7 75 44.0
Potri.017G126700 Populus trichocarpa HOM05D000611 ORTHO05D004334 1.4e-08 64.7 101 38.6
PSO210G3124 Papaver somniferum HOM05D000611 ORTHO05D004334 1.8e-08 64.3 143 35.7
arahy.Tifrunner.gnm1.ann1.E9G7WB Arachis hypogaea HOM05D000611 ORTHO05D004334 2.3e-08 63.9 185 32.4
Gorai.010G046100 Gossypium raimondii HOM05D000611 ORTHO05D004334 3.1e-08 63.5 302 28.1
PSO170G1854 Papaver somniferum HOM05D000611 ORTHO05D004334 3.1e-08 63.5 61 57.4
Eucgr.J01631 Eucalyptus grandis HOM05D000611 ORTHO05D004334 4.0e-08 63.2 262 26.7
Rhsim08G0147400 Rhododendron simsii HOM05D000611 ORTHO05D004334 4.0e-08 63.2 159 30.8
Atru.chr1.1837 Acer truncatum HOM05D000611 ORTHO05D004334 5.2e-08 62.8 70 51.4
ECA232G4037 Erigeron canadensis HOM05D000611 ORTHO05D004334 5.2e-08 62.8 97 38.1
MBI16_g23759_MAGBIO Magnolia biondii HOM05D000611 ORTHO05D004334 5.2e-08 62.8 266 25.9
arahy.Tifrunner.gnm1.ann1.WY3AB3 Arachis hypogaea HOM05D000611 ORTHO05D004334 6.8e-08 62.4 181 31.5
HanXRQChr01g0019711 Helianthus annuus HOM05D000611 ORTHO05D004334 6.8e-08 62.4 77 48.1
Dinv26577 Davidia involucrata HOM05D000611 ORTHO05D004334 1.2e-07 61.6 180 31.1
HanXRQChr01g0013841 Helianthus annuus HOM05D000611 ORTHO05D004334 1.2e-07 61.6 80 46.2
ECA238G1988 Erigeron canadensis HOM05D000611 ORTHO05D004334 1.5e-07 61.2 78 43.6
Lsat_1_v5_gn_2_79980 Lactuca sativa HOM05D000379 ORTHO05D004334 2.0e-07 60.8 148 31.1
Lj6g0006818 Lotus japonicus HOM05D000611 ORTHO05D004334 2.0e-07 60.8 265 26.8
vmacro18048 Vaccinium macrocarpon HOM05D000611 ORTHO05D004334 2.0e-07 60.8 151 29.8
Cfa009035 Carpinus fangiana HOM05D000611 ORTHO05D004334 2.6e-07 60.5 59 50.8
VMungo0647G1718 Vigna mungo HOM05D000611 ORTHO05D004334 2.6e-07 60.5 140 30.0
Cc04_g06500 Coffea canephora HOM05D000611 ORTHO05D004334 3.4e-07 60.1 202 28.7
CSS0037318 Camellia sinensis var. sinensis HOM05D000611 ORTHO05D004334 4.4e-07 59.7 48 62.5
PSO170G2195 Papaver somniferum HOM05D000611 ORTHO05D004334 4.4e-07 59.7 178 29.8
Solyc02g091460.3 Solanum lycopersicum HOM05D000611 ORTHO05D004334 4.4e-07 59.7 50 60.0
MD17G1257100 Malus domestica HOM05D000611 ORTHO05D004334 5.8e-07 59.3 49 57.1
PSO017G0779 Papaver somniferum HOM05D000611 ORTHO05D004334 5.8e-07 59.3 178 29.8
Sc15g0002490 Simmondsia chinensis HOM05D000611 ORTHO05D004334 5.8e-07 59.3 189 32.8
Aa31LG5G23450 Aethionema arabicum HOM05D000611 ORTHO05D004334 7.6e-07 58.9 183 32.8
CSS0013647 Camellia sinensis var. sinensis HOM05D000611 ORTHO05D004334 9.9e-07 58.5 174 30.5
CDE06G1088 Ceratophyllum demersum HOM05D000611 ORTHO05D004334 9.9e-07 58.5 59 52.5
QL09p038966 Quercus lobata HOM05D000611 ORTHO05D004334 1.3e-06 58.2 208 29.8
Actinidia27007 Actinidia chinensis HOM05D000611 ORTHO05D004334 1.7e-06 57.8 55 52.7
AUR62023184 Chenopodium quinoa HOM05D000611 ORTHO05D004334 2.2e-06 57.4 192 26.0
EL10Ac9g22897 Beta vulgaris HOM05D000611 ORTHO05D004334 2.9e-06 57.0 155 31.0
Sopen03g037880 Solanum pennellii HOM05D000611 ORTHO05D004334 3.8e-06 56.6 48 60.4
TWI60G0311 Tripterygium wilfordii HOM05D000611 ORTHO05D004334 3.8e-06 56.6 182 29.7
Cc04_g06510 Coffea canephora HOM05D000611 ORTHO05D004334 4.9e-06 56.2 48 56.2
Glyma.04G146300 Glycine max HOM05D000611 ORTHO05D004334 4.9e-06 56.2 185 27.0
CDE04G0197 Ceratophyllum demersum HOM05D000543 ORTHO05D004334 6.4e-06 55.8 60 53.3
PGSC0003DMG400009356 Solanum tuberosum HOM05D000611 ORTHO05D007148 6.4e-06 55.8 109 36.7


User provided reference genes

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