Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0016523 Sechium edule HOM05D007734 ORTHO05D009807 1.7e-45 185.7 96 100.0
MELO3C021378.2 Cucumis melo HOM05D007734 ORTHO05D009807 7.0e-39 163.7 94 87.2
ClCG06G005560 Citrullus lanatus HOM05D007734 ORTHO05D009807 7.8e-38 160.2 94 86.2
CsaV3_6G005600 Cucumis sativus L. HOM05D007734 ORTHO05D009807 1.7e-37 159.1 93 86.0
CiPaw.02G088300 Carya illinoinensis HOM05D007734 ORTHO05D009807 2.4e-31 138.7 91 74.7
MD13G1176100 Malus domestica HOM05D007734 ORTHO05D009807 2.4e-31 138.7 97 73.2
Sed0021110 Sechium edule HOM05D007734 ORTHO05D009807 4.1e-31 137.9 94 75.5
Prupe.1G145200 Prunus persica HOM05D007734 ORTHO05D009807 1.6e-30 136.0 97 70.1
CANSAT78G1562 Cannabis sativa HOM05D007734 ORTHO05D009807 2.7e-30 135.2 91 72.5
CiPaw.01G155700 Carya illinoinensis HOM05D007734 ORTHO05D009807 1.7e-29 132.5 89 75.3
MD16G1177900 Malus domestica HOM05D007734 ORTHO05D009807 5.0e-29 131.0 91 69.2
QL06p006592 Quercus lobata HOM05D007734 ORTHO05D009807 6.6e-29 130.6 73 86.3
GSVIVG01017837001 Vitis vinifera HOM05D007734 ORTHO05D009807 6.6e-29 130.6 94 67.0
TWI73G0877 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 1.1e-28 129.8 94 69.1
Aa31LG11G10850 Aethionema arabicum HOM05D007734 ORTHO05D009807 7.3e-28 127.1 91 68.1
FAN07G1074 Fragaria x ananassa HOM05D007734 ORTHO05D009807 7.3e-28 127.1 91 71.4
CARHR194160 Cardamine hirsuta HOM05D007734 ORTHO05D009807 1.6e-27 125.9 89 69.7
Eucgr.H03661 Eucalyptus grandis HOM05D007734 ORTHO05D009807 1.6e-27 125.9 95 66.3
FvH4_4g16860 Fragaria vesca HOM05D007734 ORTHO05D009807 2.1e-27 125.6 91 69.2
FAN12G0936 Fragaria x ananassa HOM05D007734 ORTHO05D009807 2.1e-27 125.6 91 69.2
FAN12G2573 Fragaria x ananassa HOM05D007734 ORTHO05D009807 2.1e-27 125.6 91 69.2
FAN17G2648 Fragaria x ananassa HOM05D007734 ORTHO05D009807 2.1e-27 125.6 91 70.3
Thhalv10015120m.g Eutrema salsugineum HOM05D007734 ORTHO05D009807 2.8e-27 125.2 89 68.5
TWI09G1295 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 2.8e-27 125.2 93 67.7
RcHm_v2.0_Chr4g0420431 Rosa chinensis HOM05D007734 ORTHO05D009807 3.6e-27 124.8 96 66.7
AT5G18850 Arabidopsis thaliana HOM05D007734 ORTHO05D009807 4.7e-27 124.4 90 67.8
Duzib151G0459 Durio zibethinus HOM05D007734 ORTHO05D009807 4.7e-27 124.4 94 69.1
Lj4g0025137 Lotus japonicus HOM05D007734 ORTHO05D009807 4.7e-27 124.4 73 80.8
Cfa015520 Carpinus fangiana HOM05D007734 ORTHO05D009807 6.2e-27 124.0 72 80.6
Gohir.D10G164200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 6.2e-27 124.0 94 66.0
Gorai.011G183300 Gossypium raimondii HOM05D007734 ORTHO05D009807 6.2e-27 124.0 94 66.0
Atru.chr4.2717 Acer truncatum HOM05D007734 ORTHO05D009807 1.1e-26 123.2 89 74.2
Carub.0006s1717 Capsella rubella HOM05D007734 ORTHO05D009807 1.1e-26 123.2 92 67.4
Hma1.2p1_0643F.1_g194590 Hydrangea macrophylla HOM05D007734 ORTHO05D009807 1.1e-26 123.2 94 62.8
arahy.Tifrunner.gnm1.ann1.80YKV9 Arachis hypogaea HOM05D007734 ORTHO05D009807 1.4e-26 122.9 94 66.0
arahy.Tifrunner.gnm1.ann1.F9B3QK Arachis hypogaea HOM05D007734 ORTHO05D009807 2.3e-26 122.1 94 66.0
Haze_01029 Corylus avellana HOM05D007734 ORTHO05D009807 2.3e-26 122.1 72 80.6
Migut.G00233 Erythranthe guttata HOM05D007734 ORTHO05D009807 3.1e-26 121.7 94 69.1
Gorai.006G074800 Gossypium raimondii HOM05D007734 ORTHO05D009807 4.0e-26 121.3 94 64.9
BcaB01g05276 Brassica carinata HOM05D007734 ORTHO05D009807 6.8e-26 120.6 92 66.3
BolC3t13544H Brassica oleracea HOM05D007734 ORTHO05D009807 6.8e-26 120.6 92 66.3
Dinv44448 Davidia involucrata HOM05D007734 ORTHO05D009807 6.8e-26 120.6 94 62.8
AL6G30210 Arabidopsis lyrata HOM05D007734 ORTHO05D009807 8.9e-26 120.2 90 65.6
Glyma.07G252900 Glycine max HOM05D007734 ORTHO05D009807 8.9e-26 120.2 73 75.3
Glyma.17G021500 Glycine max HOM05D007734 ORTHO05D009807 8.9e-26 120.2 73 74.0
C03p10680 Brassica napus HOM05D007734 ORTHO05D009807 1.2e-25 119.8 92 66.3
Duzib052G0038 Durio zibethinus HOM05D007734 ORTHO05D009807 1.2e-25 119.8 94 66.0
Gohir.A10G104500 Gossypium hirsutum HOM05D007734 ORTHO05D009807 1.2e-25 119.8 94 63.8
Gohir.D09G060100 Gossypium hirsutum HOM05D007734 ORTHO05D009807 1.2e-25 119.8 94 63.8
BraA03t10238Z Brassica rapa HOM05D007734 ORTHO05D009807 1.5e-25 119.4 92 65.2
Nn4g26101 Nelumbo nucifera HOM05D007734 ORTHO05D009807 1.5e-25 119.4 94 62.8
Oeu044804.1 Olea europaea HOM05D007734 ORTHO05D009807 1.5e-25 119.4 94 64.9
Phvul.003G099200 Phaseolus vulgaris HOM05D007734 ORTHO05D009807 1.5e-25 119.4 73 76.7
Sp6g25520 Schrenkiella parvula HOM05D007734 ORTHO05D009807 2.0e-25 119.0 92 66.3
Thecc.04G274000 Theobroma cacao HOM05D007734 ORTHO05D009807 2.0e-25 119.0 94 67.0
TAR365G0453 Trochodendron aralioides HOM05D007734 ORTHO05D009807 5.8e-25 117.5 94 62.8
CSS0028590 Camellia sinensis var. sinensis HOM05D007734 ORTHO05D009807 7.5e-25 117.1 94 67.0
Gohir.A09G061200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 7.5e-25 117.1 94 63.8
Peaxi162Scf00095g00125 Petunia axillaris HOM05D007734 ORTHO05D009807 1.3e-24 116.3 91 64.8
BcaB01g04888 Brassica carinata HOM05D007734 ORTHO05D009807 2.2e-24 115.5 92 64.1
SGA_v2.0_scaffold142G35667 Striga asiatica HOM05D007734 ORTHO05D009807 2.2e-24 115.5 91 64.8
Sabra08G0163100 Salix brachista HOM05D007734 ORTHO05D009807 4.9e-24 114.4 73 75.3
CDE05G0384 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 1.9e-23 112.5 80 70.0
Ciclev10007097m.g Citrus clementina HOM05D007734 ORTHO05D009807 7.1e-23 110.5 90 62.2
Potri.008G197300 Populus trichocarpa HOM05D007734 ORTHO05D009807 7.1e-23 110.5 72 75.0
PSO302G0168 Papaver somniferum HOM05D007734 ORTHO05D009807 9.2e-23 110.2 89 56.2
MBI19_g13511_MAGBIO Magnolia biondii HOM05D007734 ORTHO05D009807 1.2e-22 109.8 91 56.0
Potri.010G026900 Populus trichocarpa HOM05D007734 ORTHO05D009807 2.7e-22 108.6 73 74.0
Manes.03G189200 Manihot esculenta HOM05D007734 ORTHO05D009807 4.6e-22 107.8 73 67.1
PGSC0003DMG400032093 Solanum tuberosum HOM05D007734 ORTHO05D009807 4.6e-22 107.8 89 62.9
CAN.G627.13 Capsicum annuum HOM05D007734 ORTHO05D009807 1.7e-21 105.9 91 59.3
Lalb_Chr07g0177521 Lupinus albus HOM05D007734 ORTHO05D009807 3.0e-21 105.1 69 68.1
Nitab4.5_0009396g0030 Nicotiana tabacum HOM05D007734 ORTHO05D009807 5.1e-21 104.4 72 68.1
Sopen01g032410 Solanum pennellii HOM05D007734 ORTHO05D009807 5.1e-21 104.4 85 61.2
Ca_30429_v3 Cicer arietinum L. HOM05D007734 ORTHO05D009807 6.6e-21 104.0 71 67.6
Solyc01g080590.3 Solanum lycopersicum HOM05D007734 ORTHO05D009807 6.6e-21 104.0 85 61.2
Cc03_g02610 Coffea canephora HOM05D007734 ORTHO05D009807 1.5e-20 102.8 91 61.5
THA.LOC104818832 Tarenaya hassleriana HOM05D002550 ORTHO05D003420 4.3e-20 101.3 70 71.4
Actinidia40206 Actinidia chinensis HOM05D007734 ORTHO05D009807 9.5e-20 100.1 94 56.4
ATR0487G018 Amborella trichopoda HOM05D007734 ORTHO05D009807 1.6e-19 99.4 96 54.2
CDE05G0036 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 3.6e-19 98.2 57 78.9
MSTRG.3964 Avicennia marina HOM05D007734 ORTHO05D009807 4.7e-19 97.8 108 51.9
Psat4g030040 Pisum sativum HOM05D007734 ORTHO05D009807 1.4e-18 96.3 65 67.7
SEGI_32711 Sequoiadendron giganteum HOM05D007734 ORTHO05D009807 1.6e-14 82.8 88 46.6
Aqoxy5G00589 Aquilegia oxysepala HOM05D007734 ORTHO05D009807 2.3e-13 79.0 84 48.8
FAN22G2010 Fragaria x ananassa HOM05D007734 ORTHO05D001690 5.1e-13 77.8 49 75.5
Sc13g0003750 Simmondsia chinensis HOM05D007734 ORTHO05D009807 7.3e-12 73.9 50 70.0
A03p09150 Brassica napus HOM05D007734 ORTHO05D009807 2.1e-11 72.4 51 64.7
Nitab4.5_0000059g0330 Nicotiana tabacum HOM05D007734 ORTHO05D009807 4.7e-11 71.2 55 60.0
Actinidia00065 Actinidia chinensis HOM05D007734 ORTHO05D009807 6.8e-10 67.4 92 41.3
BcaB08g36639 Brassica carinata HOM05D007734 ORTHO05D009807 4.4e-09 64.7 41 68.3
A10p20780 Brassica napus HOM05D007734 ORTHO05D009807 1.6e-06 56.2 50 56.0


User provided reference genes

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