Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0016519 Sechium edule HOM05D006699 ORTHO05D008399 6.6e-185 650.6 334 100.0
ClCG02G017820 Citrullus lanatus HOM05D006699 ORTHO05D008399 2.5e-120 436.0 359 69.4
CsaV3_6G018450 Cucumis sativus L. HOM05D006699 ORTHO05D008399 4.8e-119 431.8 355 68.2
Dinv15443 Davidia involucrata HOM05D006699 ORTHO05D008399 6.5e-100 368.2 348 58.0
Cfa023335 Carpinus fangiana HOM05D006699 ORTHO05D008399 4.7e-98 362.1 346 60.1
QL08p041677 Quercus lobata HOM05D006699 ORTHO05D008399 2.3e-97 359.8 347 58.5
QL08p041638 Quercus lobata HOM05D006699 ORTHO05D008399 3.0e-97 359.4 347 58.5
Potri.014G142200 Populus trichocarpa HOM05D006699 ORTHO05D008399 4.0e-97 359.0 350 57.1
Haze_13371 Corylus avellana HOM05D006699 ORTHO05D008399 8.8e-97 357.8 346 59.2
CiPaw.04G132200 Carya illinoinensis HOM05D006699 ORTHO05D008399 5.7e-96 355.1 347 58.8
Manes.02G091200 Manihot esculenta HOM05D006699 ORTHO05D008399 9.8e-96 354.4 350 59.7
Thecc.01G150500 Theobroma cacao HOM05D006699 ORTHO05D008399 9.8e-96 354.4 347 57.9
Eucgr.A01914 Eucalyptus grandis HOM05D006699 ORTHO05D008399 2.8e-95 352.8 347 57.1
Gorai.008G095400 Gossypium raimondii HOM05D006699 ORTHO05D008399 1.4e-94 350.5 345 57.4
Gohir.A12G086400 Gossypium hirsutum HOM05D006699 ORTHO05D008399 1.8e-94 350.1 346 58.4
arahy.Tifrunner.gnm1.ann1.GAG0UF Arachis hypogaea HOM05D006699 ORTHO05D008399 2.4e-94 349.7 350 58.3
CSS0012388 Camellia sinensis var. sinensis HOM05D006699 ORTHO05D008399 4.1e-94 349.0 340 57.9
Prupe.3G118500 Prunus persica HOM05D006699 ORTHO05D008399 5.4e-94 348.6 348 56.6
Gohir.D12G085000 Gossypium hirsutum HOM05D006699 ORTHO05D008399 7.0e-94 348.2 345 57.7
PGR042G0843 Punica granatum HOM05D006699 ORTHO05D008399 9.1e-94 347.8 348 56.0
Sp4g13510 Schrenkiella parvula HOM05D006699 ORTHO05D008399 1.6e-93 347.1 342 56.1
Ciclev10015418m.g Citrus clementina HOM05D006699 ORTHO05D008399 2.7e-93 346.3 348 56.0
GSVIVG01020707001 Vitis vinifera HOM05D006699 ORTHO05D008399 2.7e-93 346.3 347 57.9
AL4G26070 Arabidopsis lyrata HOM05D006699 ORTHO05D008399 3.5e-93 345.9 344 57.0
AL4G26150 Arabidopsis lyrata HOM05D006699 ORTHO05D008399 5.9e-93 345.1 344 56.7
arahy.Tifrunner.gnm1.ann1.0K2T49 Arachis hypogaea HOM05D006699 ORTHO05D008399 1.0e-92 344.4 350 57.7
TAR626G0153 Trochodendron aralioides HOM05D006699 ORTHO05D008399 1.0e-92 344.4 373 54.7
CDE10G1046 Ceratophyllum demersum HOM05D006699 ORTHO05D008399 1.7e-92 343.6 328 57.3
COL.COLO4_33580 Corchorus olitorius HOM05D006699 ORTHO05D008399 1.7e-92 343.6 343 55.7
Carub.0004s1225 Capsella rubella HOM05D006699 ORTHO05D008399 5.0e-92 342.0 343 56.0
AT2G31040 Arabidopsis thaliana HOM05D006699 ORTHO05D008399 8.5e-92 341.3 343 55.7
CARHR124570 Cardamine hirsuta HOM05D006699 ORTHO05D008399 8.5e-92 341.3 343 55.1
TWI59G0496 Tripterygium wilfordii HOM05D006699 ORTHO05D008399 1.1e-91 340.9 344 57.3
CANSAT64G2599 Cannabis sativa HOM05D006699 ORTHO05D008399 1.5e-91 340.5 349 54.7
MSTRG.15092 Avicennia marina HOM05D006699 ORTHO05D008399 4.2e-91 339.0 352 55.7
MD09G1238000 Malus domestica HOM05D006699 ORTHO05D008399 4.2e-91 339.0 348 55.2
Rhsim06G0131200 Rhododendron simsii HOM05D006699 ORTHO05D008399 1.2e-90 337.4 313 58.8
Actinidia11153 Actinidia chinensis HOM05D006699 ORTHO05D008399 1.6e-90 337.0 324 59.3
MD17G1230900 Malus domestica HOM05D006699 ORTHO05D008399 1.6e-90 337.0 348 55.5
C04p60180 Brassica napus HOM05D006699 ORTHO05D008399 2.1e-90 336.7 343 55.1
BolC4t27520H Brassica oleracea HOM05D006699 ORTHO05D008399 2.1e-90 336.7 343 55.1
EL10Ac2g03349 Beta vulgaris HOM05D006699 ORTHO05D008399 2.7e-90 336.3 350 54.3
HanXRQChr17g0557951 Helianthus annuus HOM05D006699 ORTHO05D008399 3.6e-90 335.9 336 55.7
Sed0000889 Sechium edule HOM05D006699 ORTHO05D008399 3.6e-90 335.9 287 67.9
BraA04t17899Z Brassica rapa HOM05D006699 ORTHO05D008399 4.7e-90 335.5 343 55.1
Lj1A681T38 Lonicera japonica HOM05D006699 ORTHO05D008399 4.7e-90 335.5 342 54.4
A04p23730 Brassica napus HOM05D006699 ORTHO05D008399 6.1e-90 335.1 343 54.8
FvH4_6g27380 Fragaria vesca HOM05D006699 ORTHO05D008399 1.4e-89 334.0 352 54.0
Sabra14G0107300 Salix brachista HOM05D006699 ORTHO05D008399 2.3e-89 333.2 338 56.5
Thhalv10016897m.g Eutrema salsugineum HOM05D006699 ORTHO05D008399 8.8e-89 331.3 342 53.5
RcHm_v2.0_Chr2g0129651 Rosa chinensis HOM05D006699 ORTHO05D008399 8.8e-89 331.3 349 53.9
SGA_v2.0_scaffold9G04816 Striga asiatica HOM05D006699 ORTHO05D008399 8.8e-89 331.3 334 56.9
ECA233G1148 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.0e-88 330.1 342 55.0
Lalb_Chr01g0006001 Lupinus albus HOM05D006699 ORTHO05D008399 4.4e-88 328.9 348 54.9
AUR62039018 Chenopodium quinoa HOM05D006699 ORTHO05D008399 3.7e-87 325.9 358 53.1
PGSC0003DMG400020443 Solanum tuberosum HOM05D006699 ORTHO05D008399 6.3e-87 325.1 350 56.0
MELO3C013567.2 Cucumis melo HOM05D006699 ORTHO05D008399 1.1e-86 324.3 249 73.1
Glyma.06G277600 Glycine max HOM05D006699 ORTHO05D008399 1.1e-86 324.3 336 56.5
Nitab4.5_0001095g0100 Nicotiana tabacum HOM05D006699 ORTHO05D008399 3.1e-86 322.8 349 54.4
Peaxi162Scf00384g00423 Petunia axillaris HOM05D006699 ORTHO05D008399 4.1e-86 322.4 348 54.6
Solyc07g055050.3 Solanum lycopersicum HOM05D006699 ORTHO05D008399 4.1e-86 322.4 352 55.4
Sopen07g027160 Solanum pennellii HOM05D006699 ORTHO05D008399 4.1e-86 322.4 352 55.4
VMungo1127G1340 Vigna mungo HOM05D006699 ORTHO05D008399 5.4e-86 322.0 334 55.7
Lj3g0015335 Lotus japonicus HOM05D006699 ORTHO05D008399 1.2e-85 320.9 351 54.4
PSO675G3944 Papaver somniferum HOM05D006699 ORTHO05D008399 1.2e-85 320.9 353 52.1
PGSC0003DMG400007857 Solanum tuberosum HOM05D006699 ORTHO05D008399 1.2e-85 320.9 350 54.9
unitig_0.g2026 Utricularia gibba HOM05D006699 ORTHO05D008399 1.2e-85 320.9 356 52.0
Phvul.011G130500 Phaseolus vulgaris HOM05D006699 ORTHO05D008399 1.6e-85 320.5 336 55.4
PSO229G0039 Papaver somniferum HOM05D006699 ORTHO05D008399 2.7e-85 319.7 355 51.5
Migut.M00261 Erythranthe guttata HOM05D006699 ORTHO05D008399 5.9e-85 318.5 341 53.4
Lsat_1_v5_gn_8_140640 Lactuca sativa HOM05D006699 ORTHO05D008399 5.9e-85 318.5 339 53.7
FAN14G2123 Fragaria x ananassa HOM05D006699 ORTHO05D008399 7.7e-85 318.2 364 51.9
Medtr4g079850 Medicago truncatula HOM05D006699 ORTHO05D008399 5.0e-84 315.5 351 52.4
Psat7g165360 Pisum sativum HOM05D006699 ORTHO05D008399 2.1e-82 310.1 344 52.3
Sopen12g006230 Solanum pennellii HOM05D006699 ORTHO05D008399 2.1e-82 310.1 287 59.6
Solyc12g010870.3 Solanum lycopersicum HOM05D006699 ORTHO05D008399 1.8e-81 307.0 287 59.2
Ca_18111_v3 Cicer arietinum L. HOM05D006699 ORTHO05D008399 4.0e-81 305.8 344 52.9
FAN09G4348 Fragaria x ananassa HOM05D006699 ORTHO05D008399 5.2e-81 305.4 378 50.3
Aqoxy1G02064 Aquilegia oxysepala HOM05D006699 ORTHO05D008399 4.9e-79 298.9 267 60.7
CAN.G1049.6 Capsicum annuum HOM05D006699 ORTHO05D008399 1.2e-77 294.3 354 52.0
ATR0602G053 Amborella trichopoda HOM05D006699 ORTHO05D008399 2.0e-77 293.5 324 52.2
Nitab4.5_0009754g0010 Nicotiana tabacum HOM05D006699 ORTHO05D008399 3.9e-76 289.3 352 51.1
Hund07812 Selenicereus undatus HOM05D006699 ORTHO05D008399 5.0e-76 288.9 348 50.0
DCAR_017060 Daucus carota HOM05D006699 ORTHO05D008399 1.5e-75 287.3 334 50.9
Nitab4.5_0000537g0130 Nicotiana tabacum HOM05D006699 ORTHO05D008399 2.8e-74 283.1 355 51.0
Os01g0673800 Oryza sativa ssp. japonica HOM05D006699 ORTHO05D008399 1.8e-73 280.4 329 52.6
Aa31LG1G7380 Aethionema arabicum HOM05D006699 ORTHO05D008399 2.3e-73 280.0 285 54.7
FAN02G3357 Fragaria x ananassa HOM05D006699 ORTHO05D008399 1.2e-72 277.7 320 51.6
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 9.8e-72 274.6 239 63.6
Manes.01G133200 Manihot esculenta HOM05D006699 ORTHO05D008399 1.3e-71 274.2 293 58.4
Sc06g0009080 Simmondsia chinensis HOM05D006699 ORTHO05D008399 3.2e-70 269.6 281 54.4
Nitab4.5_0011277g0010 Nicotiana tabacum HOM05D006699 ORTHO05D008399 1.2e-69 267.7 355 49.0
Peaxi162Scf00469g00217 Petunia axillaris HOM05D006699 ORTHO05D008399 4.6e-69 265.8 338 49.7
Eucgr.K01127 Eucalyptus grandis HOM05D006699 ORTHO05D008399 1.3e-68 264.2 338 46.7
Lju1655A0G36 Lonicera japonica HOM05D006699 ORTHO05D008399 6.8e-65 251.9 409 40.1
Oeu018752.1 Olea europaea HOM05D006699 ORTHO05D008399 2.7e-61 240.0 230 58.3
vmacro12376 Vaccinium macrocarpon HOM05D006699 ORTHO05D008399 7.8e-61 238.4 343 43.7
HPP92_009665 Vanilla planifolia HOM05D006699 ORTHO05D008399 5.1e-60 235.7 371 42.6
Mapoly0038s0046 Marchantia polymorpha HOM05D006699 ORTHO05D008399 3.6e-58 229.6 295 47.1
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 1.4e-57 227.6 172 68.0
TPR.G28306 Trifolium pratense HOM05D006699 ORTHO05D008399 9.9e-56 221.5 297 49.2
Pp3c8_13580 Physcomitrium patens HOM05D006699 ORTHO05D008399 9.2e-54 214.9 281 47.0
AagrBONN_evm.TU.Sc2ySwM_228.3020 Anthoceros agrestis HOM05D006699 ORTHO05D008399 2.1e-53 213.8 294 45.9
Cc05_g08340 Coffea canephora HOM05D006699 ORTHO05D008399 1.6e-50 204.1 258 50.0
Atru.chr6.2796 Acer truncatum HOM05D006699 ORTHO05D008399 3.9e-44 183.0 181 57.5
SEGI_23271 Sequoiadendron giganteum HOM05D006699 ORTHO05D008399 8.1e-42 175.3 229 47.6
SMO014G0045 Selaginella moellendorffii HOM05D006699 ORTHO05D008399 4.6e-37 159.5 341 34.9
Cpa.g.sc52.174 Carica papaya HOM05D006699 ORTHO05D008399 6.2e-34 149.1 202 47.5
Cc05_g08350 Coffea canephora HOM05D006699 ORTHO05D008399 1.2e-29 134.8 90 71.1
Zm00001eb360100 Zea mays HOM05D006699 ORTHO05D008399 2.3e-28 130.6 230 39.6
Cre01.g049600 Chlamydomonas reinhardtii HOM05D006699 ORTHO05D008399 8.4e-23 112.1 325 30.5
Atru.chr6.2795 Acer truncatum HOM05D006699 ORTHO05D008399 2.5e-22 110.5 68 75.0
PRCOL_00001453 Prasinoderma coloniale HOM05D006699 ORTHO05D008399 6.9e-17 92.4 233 34.3
BraA03t11005Z Brassica rapa HOM05D006699 ORTHO05D008399 1.2e-16 91.7 85 55.3
CDE10G0215 Ceratophyllum demersum HOM05D006699 ORTHO05D008399 2.6e-16 90.5 60 71.7
A03p17330 Brassica napus HOM05D006699 ORTHO05D008399 1.3e-15 88.2 85 54.1
Lsat_1_v5_gn_2_38761 Lactuca sativa HOM05D006699 ORTHO05D008399 1.9e-14 84.3 76 60.5
vmacro12375 Vaccinium macrocarpon HOM05D006699 ORTHO05D008399 5.1e-12 76.3 87 46.0
Ah.01g003520 Amaranthus hybridus HOM05D006699 ORTHO05D008399 2.8e-10 70.5 94 41.5
MCO04G044 Micromonas commoda HOM05D006699 ORTHO05D008399 6.3e-10 69.3 205 33.7
C03p20440 Brassica napus HOM05D006699 ORTHO05D042655 5.0e-07 59.7 54 51.9
BolC3t14422H Brassica oleracea HOM05D006699 ORTHO05D042655 5.0e-07 59.7 54 51.9


User provided reference genes

Program Settings