Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 6.5e-45 183.7 95 100.0
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 3.1e-39 164.9 91 90.1
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 4.1e-39 164.5 91 90.1
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 1.5e-38 162.5 91 89.0
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 7.7e-38 160.2 96 87.5
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 5.0e-37 157.5 95 86.3
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 6.5e-37 157.1 90 87.8
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 6.5e-37 157.1 95 85.3
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 8.5e-37 156.8 83 94.0
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 1.1e-36 156.4 90 86.7
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 1.9e-36 155.6 92 87.0
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 1.9e-36 155.6 95 84.2
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 2.5e-36 155.2 94 84.0
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 3.2e-36 154.8 83 94.0
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 3.2e-36 154.8 94 85.1
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 4.2e-36 154.5 95 82.1
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 5.5e-36 154.1 95 82.1
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 5.5e-36 154.1 91 86.8
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 1.2e-35 152.9 95 85.3
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 1.6e-35 152.5 87 87.4
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 2.1e-35 152.1 87 87.4
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 2.1e-35 152.1 95 83.2
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 2.7e-35 151.8 91 85.7
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 3.6e-35 151.4 87 86.2
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 3.6e-35 151.4 87 86.2
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 3.6e-35 151.4 92 84.8
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 3.6e-35 151.4 84 86.9
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 4.7e-35 151.0 86 88.4
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 6.1e-35 150.6 93 80.6
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 7.9e-35 150.2 85 87.1
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 1.0e-34 149.8 92 83.7
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 1.0e-34 149.8 95 81.1
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 1.0e-34 149.8 95 80.0
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 1.8e-34 149.1 85 87.1
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 2.3e-34 148.7 95 81.1
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 3.0e-34 148.3 85 87.1
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 3.0e-34 148.3 86 84.9
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 3.0e-34 148.3 90 81.1
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 3.9e-34 147.9 86 84.9
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 3.9e-34 147.9 95 84.2
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 5.2e-34 147.5 90 84.4
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 5.2e-34 147.5 90 84.4
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 6.7e-34 147.1 95 78.9
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 8.8e-34 146.7 83 86.7
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 8.8e-34 146.7 87 81.6
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 1.1e-33 146.4 90 82.2
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 1.1e-33 146.4 86 88.4
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 1.1e-33 146.4 86 88.4
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 1.1e-33 146.4 86 88.4
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 1.1e-33 146.4 82 90.2
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 1.5e-33 146.0 87 83.9
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 1.5e-33 146.0 91 84.6
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 2.0e-33 145.6 99 78.8
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 2.6e-33 145.2 86 80.2
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 4.4e-33 144.4 92 81.5
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 7.4e-33 143.7 91 81.3
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 7.4e-33 143.7 90 82.2
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 1.7e-32 142.5 82 87.8
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 1.7e-32 142.5 89 78.7
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 2.2e-32 142.1 94 73.4
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 2.2e-32 142.1 90 82.2
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 2.8e-32 141.7 94 73.4
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 2.8e-32 141.7 94 73.4
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 2.8e-32 141.7 101 72.3
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 3.7e-32 141.4 86 81.4
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 3.7e-32 141.4 95 74.7
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 3.7e-32 141.4 95 74.7
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 3.7e-32 141.4 95 74.7
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 3.7e-32 141.4 118 67.8
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 4.8e-32 141.0 89 84.3
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 8.2e-32 140.2 84 86.9
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 1.1e-31 139.8 82 81.7
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 1.1e-31 139.8 82 79.3
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 1.4e-31 139.4 82 80.5
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 1.4e-31 139.4 98 77.6
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 1.8e-31 139.0 97 74.2
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 1.8e-31 139.0 79 87.3
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 1.8e-31 139.0 86 80.2
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 2.4e-31 138.7 79 82.3
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 2.4e-31 138.7 84 85.7
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 4.1e-31 137.9 94 71.3
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 7.0e-31 137.1 95 71.6
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 7.0e-31 137.1 88 80.7
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 9.1e-31 136.7 90 73.3
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 9.1e-31 136.7 95 71.6
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 9.1e-31 136.7 95 71.6
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 9.1e-31 136.7 95 71.6
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 9.1e-31 136.7 95 71.6
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 1.2e-30 136.3 99 72.7
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 1.2e-30 136.3 74 87.8
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 1.2e-30 136.3 84 83.3
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 1.6e-30 136.0 110 68.2
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 1.6e-30 136.0 93 78.5
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 2.0e-30 135.6 82 78.0
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 2.0e-30 135.6 78 92.3
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 2.6e-30 135.2 95 70.5
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 3.5e-30 134.8 79 82.3
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 4.5e-30 134.4 85 80.0
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 5.9e-30 134.0 96 70.8
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 5.9e-30 134.0 84 83.3
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 1.3e-29 132.9 77 80.5
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 1.7e-29 132.5 107 65.4
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 2.5e-28 128.6 86 72.1
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 3.2e-28 128.3 79 84.8
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 7.2e-28 127.1 76 77.6
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 1.2e-27 126.3 84 73.8
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 6.1e-27 124.0 72 87.5
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 1.0e-26 123.2 80 83.8
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 1.4e-26 122.9 84 83.3
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 4.0e-26 121.3 78 84.6
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 5.2e-26 120.9 76 77.6
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 1.2e-25 119.8 84 70.2
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 3.3e-25 118.2 76 76.3
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 5.7e-25 117.5 75 77.3
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 1.3e-24 116.3 66 81.8
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 8.2e-24 113.6 64 85.9
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 4.1e-23 111.3 71 77.5
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 1.7e-21 105.9 93 61.3
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 1.7e-21 105.9 77 72.7
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 2.9e-21 105.1 95 66.3
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 2.3e-18 95.5 86 61.6
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 2.8e-16 88.6 47 89.4
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 1.8e-15 85.9 69 68.1
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 4.1e-15 84.7 65 58.5
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 1.6e-14 82.8 71 53.5
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 4.5e-14 81.3 55 72.7
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 8.0e-11 70.5 64 59.4
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 3.0e-10 68.6 61 59.0
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 2.8e-08 62.0 48 62.5
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 2.8e-08 62.0 48 62.5
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 2.8e-08 62.0 48 62.5
Pp3c3_450 Physcomitrium patens HOM05D005828 ORTHO05D006822 7.8e-06 53.9 94 38.3


User provided reference genes

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