Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0016506 Sechium edule HOM05D006255 ORTHO05D008014 2.1e-113 412.5 231 100.0
Sed0013069 Sechium edule HOM05D006255 ORTHO05D008014 2.7e-89 332.4 231 81.4
CsaV3_7G001410 Cucumis sativus L. HOM05D006255 ORTHO05D008014 2.0e-87 326.2 231 80.1
ClCG02G003730 Citrullus lanatus HOM05D006255 ORTHO05D008014 3.8e-83 312.0 226 78.3
MELO3C013309.2 Cucumis melo HOM05D006255 ORTHO05D008014 8.0e-81 304.3 231 75.8
TAR625G0439 Trochodendron aralioides HOM05D006255 ORTHO05D008014 2.6e-79 299.3 228 72.4
Ciclev10029213m.g Citrus clementina HOM05D006255 ORTHO05D008014 3.4e-79 298.9 227 73.6
Nn5g30887 Nelumbo nucifera HOM05D006255 ORTHO05D008014 1.3e-78 297.0 227 73.1
Duzib248G1128 Durio zibethinus HOM05D006255 ORTHO05D008014 3.7e-78 295.4 228 72.8
vmacro02304 Vaccinium macrocarpon HOM05D006255 ORTHO05D008014 6.3e-78 294.7 227 73.6
Manes.11G100600 Manihot esculenta HOM05D006255 ORTHO05D008014 1.1e-77 293.9 227 71.4
CSS0039919 Camellia sinensis var. sinensis HOM05D006255 ORTHO05D008014 9.2e-77 290.8 227 71.8
Eucgr.I01476 Eucalyptus grandis HOM05D006255 ORTHO05D008014 9.2e-77 290.8 227 71.8
PGR142G2886 Punica granatum HOM05D006255 ORTHO05D008014 2.0e-76 289.7 228 71.5
Lj9A402T69 Lonicera japonica HOM05D006255 ORTHO05D008014 2.7e-76 289.3 227 71.8
Actinidia20544 Actinidia chinensis HOM05D006255 ORTHO05D008014 3.5e-76 288.9 231 71.0
TWI31G0945 Tripterygium wilfordii HOM05D006255 ORTHO05D008014 3.5e-76 288.9 228 71.5
arahy.Tifrunner.gnm1.ann1.K7U5ID Arachis hypogaea HOM05D006255 ORTHO05D008014 4.5e-76 288.5 229 72.5
arahy.Tifrunner.gnm1.ann1.5E63QU Arachis hypogaea HOM05D006255 ORTHO05D008014 1.3e-75 287.0 229 72.1
Gohir.D01G162900 Gossypium hirsutum HOM05D006255 ORTHO05D008014 5.6e-74 281.6 228 71.9
Gorai.002G202100 Gossypium raimondii HOM05D006255 ORTHO05D008014 5.6e-74 281.6 228 71.9
Gohir.A12G035500 Gossypium hirsutum HOM05D006255 ORTHO05D008014 2.1e-73 279.6 228 68.9
Atru.chr5.3479 Acer truncatum HOM05D006255 ORTHO05D008014 8.0e-73 277.7 228 69.3
THA.LOC104804084 Tarenaya hassleriana HOM05D006255 ORTHO05D008014 5.2e-72 275.0 228 67.5
Thecc.02G052300 Theobroma cacao HOM05D006255 ORTHO05D008014 2.0e-71 273.1 228 69.7
MBI05_g35101_MAGBIO Magnolia biondii HOM05D006255 ORTHO05D008014 3.7e-70 268.9 228 64.9
Prupe.8G172600 Prunus persica HOM05D006255 ORTHO05D008014 8.3e-70 267.7 228 67.5
Aqoxy5G01073 Aquilegia oxysepala HOM05D006255 ORTHO05D008014 3.2e-69 265.8 229 68.1
ATR0661G177 Amborella trichopoda HOM05D006255 ORTHO05D008014 4.1e-69 265.4 226 69.0
MSTRG.19958 Avicennia marina HOM05D006255 ORTHO05D008014 7.0e-69 264.6 228 66.2
Medtr3g118350 Medicago truncatula HOM05D006255 ORTHO05D008014 1.6e-68 263.5 227 68.7
Potri.009G140200 Populus trichocarpa HOM05D006255 ORTHO05D008014 2.0e-68 263.1 228 68.0
Actinidia18024 Actinidia chinensis HOM05D006255 ORTHO05D008014 2.7e-68 262.7 231 66.2
Cc09_g10450 Coffea canephora HOM05D006255 ORTHO05D008014 4.6e-68 261.9 224 67.9
Solyc01g111940.4 Solanum lycopersicum HOM05D006255 ORTHO05D008014 1.3e-67 260.4 228 65.4
COL.COLO4_18000 Corchorus olitorius HOM05D006255 ORTHO05D008014 3.0e-67 259.2 230 65.7
Sopen01g053990 Solanum pennellii HOM05D006255 ORTHO05D008014 3.0e-67 259.2 228 64.9
Phvul.009G117000 Phaseolus vulgaris HOM05D006255 ORTHO05D008014 8.6e-67 257.7 228 67.1
MSTRG.16938 Avicennia marina HOM05D006255 ORTHO05D008014 2.5e-66 256.1 228 65.4
Hma1.2p1_0163F.1_g072870 Hydrangea macrophylla HOM05D006255 ORTHO05D008014 9.5e-66 254.2 228 65.8
PGSC0003DMG401018633 Solanum tuberosum HOM05D006255 ORTHO05D008014 1.2e-65 253.8 224 64.3
Cpa.g.sc20.136 Carica papaya HOM05D006255 ORTHO05D008014 1.6e-65 253.4 227 64.8
ECA233G3172 Erigeron canadensis HOM05D006255 ORTHO05D008014 1.6e-65 253.4 230 64.8
HanXRQChr16g0527781 Helianthus annuus HOM05D006255 ORTHO05D008014 6.2e-65 251.5 231 64.1
Oeu029013.1 Olea europaea HOM05D006255 ORTHO05D008014 8.0e-65 251.1 226 65.0
Gohir.D12G037200 Gossypium hirsutum HOM05D006255 ORTHO05D008014 4.0e-64 248.8 228 63.6
Nitab4.5_0003603g0130 Nicotiana tabacum HOM05D006255 ORTHO05D008014 4.0e-64 248.8 225 64.4
Lsat_1_v5_gn_8_122201 Lactuca sativa HOM05D006255 ORTHO05D008014 5.8e-63 245.0 227 64.8
Nn6g31846 Nelumbo nucifera HOM05D006255 ORTHO05D008014 5.8e-63 245.0 228 64.0
HPP92_022389 Vanilla planifolia HOM05D006255 ORTHO05D008014 5.8e-63 245.0 223 63.7
Dinv14143 Davidia involucrata HOM05D006255 ORTHO05D008014 2.9e-62 242.7 228 63.6
Aa31LG7G15760 Aethionema arabicum HOM05D007460 ORTHO05D009396 3.7e-62 242.3 245 59.6
Gorai.008G038300 Gossypium raimondii HOM05D006255 ORTHO05D008014 3.7e-62 242.3 228 62.3
Os04g0561600 Oryza sativa ssp. japonica HOM05D006255 ORTHO05D008014 8.3e-62 241.1 233 61.4
TPR.G38579 Trifolium pratense HOM05D006255 ORTHO05D008014 1.9e-61 240.0 229 62.4
Cfa005320 Carpinus fangiana HOM05D006255 ORTHO05D010524 9.2e-61 237.7 222 64.0
Aa31LG9G40 Aethionema arabicum HOM05D006255 ORTHO05D008014 1.2e-60 237.3 245 58.4
Carub.0001s1596 Capsella rubella HOM05D006255 ORTHO05D008014 1.6e-60 236.9 229 59.4
Nitab4.5_0001506g0010 Nicotiana tabacum HOM05D006255 ORTHO05D008014 3.5e-60 235.7 226 61.5
HPP92_025891 Vanilla planifolia HOM05D006255 ORTHO05D008014 3.5e-60 235.7 232 62.9
Glyma.06G001200 Glycine max HOM05D006255 ORTHO05D008014 7.8e-60 234.6 228 62.3
unitig_0.g812 Utricularia gibba HOM05D006255 ORTHO05D008014 1.0e-59 234.2 224 60.3
SMO119G0083 Selaginella moellendorffii HOM05D006255 ORTHO05D008014 1.3e-59 233.8 230 58.7
Sc08g0002620 Simmondsia chinensis HOM05D006255 ORTHO05D008014 1.7e-59 233.4 228 62.3
EL10Ac9g21307 Beta vulgaris HOM05D006255 ORTHO05D008014 5.1e-59 231.9 228 59.6
CANSAT25G2216 Cannabis sativa HOM05D006255 ORTHO05D008014 5.1e-59 231.9 228 61.4
MD10G1131800 Malus domestica HOM05D006255 ORTHO05D008014 6.6e-59 231.5 228 61.4
Nitab4.5_0001629g0040 Nicotiana tabacum HOM05D006255 ORTHO05D008014 6.6e-59 231.5 228 59.6
Nitab4.5_0001215g0050 Nicotiana tabacum HOM05D006255 ORTHO05D008014 1.5e-58 230.3 228 60.1
SGA_v2.0_scaffold32G13327 Striga asiatica HOM05D006255 ORTHO05D008014 5.6e-58 228.4 228 59.6
Psat5g000920 Pisum sativum HOM05D006255 ORTHO05D008014 9.5e-58 227.6 228 61.4
Sabra09G0108900 Salix brachista HOM05D006255 ORTHO05D008014 9.5e-58 227.6 258 57.0
Gohir.A01G171900 Gossypium hirsutum HOM05D006255 ORTHO05D008014 2.1e-57 226.5 153 79.7
AL1G28330 Arabidopsis lyrata HOM05D006255 ORTHO05D008014 2.8e-57 226.1 229 57.2
CiPaw.05G087400 Carya illinoinensis HOM05D006255 ORTHO05D008014 4.7e-57 225.3 228 61.0
FAN15G2553 Fragaria x ananassa HOM05D006255 ORTHO05D008014 4.7e-57 225.3 230 62.2
Peaxi162Scf00362g00349 Petunia axillaris HOM05D006255 ORTHO05D008014 1.4e-56 223.8 227 58.6
CBR_g61263 Chara braunii HOM05D006255 ORTHO05D008014 2.3e-56 223.0 230 55.2
PSO675G3819 Papaver somniferum HOM05D006255 ORTHO05D008014 2.3e-56 223.0 228 59.6
Lj4g0004587 Lotus japonicus HOM05D006255 ORTHO05D008014 3.1e-56 222.6 229 61.1
CDE02G2216 Ceratophyllum demersum HOM05D006255 ORTHO05D008014 2.0e-55 219.9 228 56.6
SalBow1G8078 Salvia bowleyana HOM05D006255 ORTHO05D010524 1.3e-54 217.2 228 56.6
Ah.01g007960 Amaranthus hybridus HOM05D006255 ORTHO05D008014 2.9e-54 216.1 229 57.2
Glyma.04G001700 Glycine max HOM05D006255 ORTHO05D008014 2.9e-54 216.1 228 58.8
QL11p053294 Quercus lobata HOM05D006255 ORTHO05D008014 1.4e-53 213.8 228 59.6
MD05G1128500 Malus domestica HOM05D006255 ORTHO05D008014 5.4e-53 211.8 228 57.9
CARHR016680 Cardamine hirsuta HOM05D006255 ORTHO05D008014 7.1e-53 211.5 229 55.9
Ca_15278_v3 Cicer arietinum L. HOM05D006255 ORTHO05D008014 9.2e-53 211.1 231 58.0
Lalb_Chr08g0246771 Lupinus albus HOM05D006255 ORTHO05D008014 2.7e-52 209.5 232 57.3
BcaB03g14828 Brassica carinata HOM05D006255 ORTHO05D008014 1.0e-51 207.6 229 55.0
RcHm_v2.0_Chr6g0279491 Rosa chinensis HOM05D006255 ORTHO05D008014 1.3e-51 207.2 230 59.1
PSO541G1652 Papaver somniferum HOM05D006255 ORTHO05D008014 3.0e-51 206.1 228 56.1
AT1G16210 Arabidopsis thaliana HOM05D006255 ORTHO05D008014 3.9e-51 205.7 229 53.7
FvH4_2g15950 Fragaria vesca HOM05D006255 ORTHO05D008014 3.9e-51 205.7 230 58.3
Os03g0131800 Oryza sativa ssp. japonica HOM05D006255 ORTHO05D008014 5.1e-51 205.3 230 57.0
FAN27G1328 Fragaria x ananassa HOM05D006255 ORTHO05D008014 1.5e-50 203.8 226 58.4
Pp3c7_26990 Physcomitrium patens HOM05D006255 ORTHO05D008014 5.6e-50 201.8 228 53.1
Zm00001eb074070 Zea mays HOM05D006255 ORTHO05D008014 5.6e-50 201.8 235 54.5
FAN24G2083 Fragaria x ananassa HOM05D006255 ORTHO05D008014 1.2e-49 200.7 226 57.5
AagrBONN_evm.TU.Sc2ySwM_368.1212 Anthoceros agrestis HOM05D006255 ORTHO05D008014 3.6e-49 199.1 230 52.2
Haze_02065 Corylus avellana HOM05D006255 ORTHO05D008014 8.1e-49 198.0 331 44.1
Mapoly0058s0055 Marchantia polymorpha HOM05D006255 ORTHO05D008014 1.8e-48 196.8 226 51.8
VMungo1309G1654 Vigna mungo HOM05D006255 ORTHO05D008014 3.4e-47 192.6 228 55.7
Pp3c11_730 Physcomitrium patens HOM05D006255 ORTHO05D008014 4.9e-46 188.7 228 50.9
Pp3c11_731 Physcomitrium patens HOM05D006255 ORTHO05D008014 8.4e-46 188.0 228 50.9
Duzib132G0230 Durio zibethinus HOM05D006255 ORTHO05D008014 7.1e-45 184.9 228 54.4
C06p44610 Brassica napus HOM05D002002 ORTHO05D008711 1.3e-43 180.6 226 51.3
BolC6t39525H Brassica oleracea HOM05D006255 ORTHO05D008014 1.3e-43 180.6 226 51.3
BcaB03g14827 Brassica carinata HOM05D002002 ORTHO05D008711 5.1e-43 178.7 226 51.3
BraA07t31267Z Brassica rapa HOM05D006255 ORTHO05D008014 7.3e-42 174.9 226 50.0
CAN.G1235.32 Capsicum annuum HOM05D006255 ORTHO05D008014 9.6e-42 174.5 188 58.5
A07p37050 Brassica napus HOM05D002002 ORTHO05D008711 1.6e-41 173.7 226 49.6
AUR62009986 Chenopodium quinoa HOM05D006255 ORTHO05D008014 1.2e-39 167.5 226 47.3
Sp4g00050 Schrenkiella parvula HOM05D006255 ORTHO05D008014 1.3e-38 164.1 227 47.6
Lj5C174T15 Lonicera japonica HOM05D006255 ORTHO05D008014 1.4e-37 160.6 226 50.4
CDE09G0466 Ceratophyllum demersum HOM05D006255 ORTHO05D008014 4.2e-37 159.1 97 76.3
Ah.01g023450 Amaranthus hybridus HOM05D000939 ORTHO05D000745 1.6e-36 157.1 211 50.2
GSVIVG01023898001 Vitis vinifera HOM05D006255 ORTHO05D008014 2.3e-27 126.7 64 89.1
C06p36040 Brassica napus HOM05D006255 ORTHO05D008014 6.7e-27 125.2 79 77.2
AUR62012975 Chenopodium quinoa HOM05D006255 ORTHO05D008014 3.3e-26 122.9 226 40.3
Gohir.A03G206650 Gossypium hirsutum HOM05D006255 ORTHO05D008014 7.4e-26 121.7 226 41.6
Cre14.g629500 Chlamydomonas reinhardtii HOM05D006255 ORTHO05D008014 1.3e-25 120.9 225 39.6
PRCOL_00005063 Prasinoderma coloniale HOM05D006255 ORTHO05D008014 1.1e-24 117.9 227 41.4
Peaxi162Scf00875g00037 Petunia axillaris HOM05D006255 ORTHO05D008014 1.4e-24 117.5 95 62.1
Gorai.005G255900 Gossypium raimondii HOM05D006255 ORTHO05D008014 2.4e-24 116.7 226 38.9
BolC6t38725H Brassica oleracea HOM05D006255 ORTHO05D008014 1.2e-23 114.4 68 79.4
Migut.H01073 Erythranthe guttata HOM05D006255 ORTHO05D008014 8.4e-22 108.2 220 41.8
MCO11G585 Micromonas commoda HOM05D006255 ORTHO05D008014 5.5e-13 79.0 164 39.0
PSO541G1702 Papaver somniferum HOM05D006255 ORTHO05D008014 3.5e-12 76.3 169 43.2
BcaC08g45811 Brassica carinata HOM05D006255 ORTHO05D008014 9.7e-10 68.2 47 68.1
Cfa024524 Carpinus fangiana HOM05D006255 ORTHO05D008014 4.5e-07 59.3 78 42.3


User provided reference genes

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