Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0016405 Sechium edule HOM05D005475 ORTHO05D006575 1.4e-44 182.6 90 100.0
COL.COLO4_15946 Corchorus olitorius HOM05D005475 ORTHO05D006575 1.6e-13 79.3 81 54.3
Solyc09g090540.3 Solanum lycopersicum HOM05D005475 ORTHO05D006575 2.4e-12 75.5 70 57.1
Nitab4.5_0002709g0070 Nicotiana tabacum HOM05D005475 ORTHO05D006575 3.1e-12 75.1 82 45.1
CAN.G220.90 Capsicum annuum HOM05D005475 ORTHO05D006575 5.3e-12 74.3 73 53.4
Ca_11926_v3 Cicer arietinum L. HOM05D005475 ORTHO05D006575 9.0e-12 73.6 70 51.4
Glyma.10G136600 Glycine max HOM05D005475 ORTHO05D006575 1.2e-11 73.2 70 55.7
Gorai.005G053100 Gossypium raimondii HOM05D005475 ORTHO05D006575 1.2e-11 73.2 70 51.4
Cfa014769 Carpinus fangiana HOM05D005475 ORTHO05D006575 1.5e-11 72.8 70 54.3
Dinv27096 Davidia involucrata HOM05D005475 ORTHO05D006575 1.5e-11 72.8 83 54.2
Gohir.A02G042200 Gossypium hirsutum HOM05D005475 ORTHO05D006575 1.5e-11 72.8 70 50.0
Gohir.D02G047800 Gossypium hirsutum HOM05D005475 ORTHO05D006575 1.5e-11 72.8 70 50.0
Phvul.007G271300 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 1.5e-11 72.8 83 50.6
Aa31LG1G20410 Aethionema arabicum HOM05D005475 ORTHO05D006575 2.6e-11 72.0 88 40.9
Hma1.2p1_0112F.1_g054570 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 2.6e-11 72.0 89 46.1
Ciclev10006301m.g Citrus clementina HOM05D005475 ORTHO05D006575 3.4e-11 71.6 70 54.3
Hma1.2p1_0385F.1_g141450 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 3.4e-11 71.6 65 56.9
Nitab4.5_0001051g0090 Nicotiana tabacum HOM05D005475 ORTHO05D006575 4.4e-11 71.2 82 42.7
Lalb_Chr19g0128471 Lupinus albus HOM05D005475 ORTHO05D006575 7.6e-11 70.5 86 47.7
Prupe.1G046100 Prunus persica HOM05D005475 ORTHO05D006575 9.9e-11 70.1 65 55.4
MD13G1219400 Malus domestica HOM05D005475 ORTHO05D006575 1.3e-10 69.7 65 55.4
THA.LOC104816000 Tarenaya hassleriana HOM05D005475 ORTHO05D006575 1.3e-10 69.7 70 48.6
CANSAT78G0624 Cannabis sativa HOM05D005475 ORTHO05D006575 1.7e-10 69.3 74 51.4
Psat6g107160 Pisum sativum HOM05D005475 ORTHO05D006575 1.7e-10 69.3 69 47.8
CiPaw.01G179400 Carya illinoinensis HOM05D005475 ORTHO05D006575 2.2e-10 68.9 70 55.7
MD16G1224800 Malus domestica HOM05D005475 ORTHO05D006575 2.2e-10 68.9 65 55.4
Peaxi162Scf00033g02837 Petunia axillaris HOM05D005475 ORTHO05D006575 2.2e-10 68.9 70 51.4
CiPaw.02G108100 Carya illinoinensis HOM05D005475 ORTHO05D006575 4.9e-10 67.8 70 54.3
Potri.010G067200 Populus trichocarpa HOM05D005475 ORTHO05D006575 4.9e-10 67.8 70 51.4
RcHm_v2.0_Chr4g0394791 Rosa chinensis HOM05D005475 ORTHO05D006575 6.4e-10 67.4 65 52.3
Lsat_1_v5_gn_1_75221 Lactuca sativa HOM05D005475 ORTHO05D006575 8.4e-10 67.0 84 46.4
TWI73G1305 Tripterygium wilfordii HOM05D005475 ORTHO05D006575 8.4e-10 67.0 70 51.4
GSVIVG01027899001 Vitis vinifera HOM05D005475 ORTHO05D006575 8.4e-10 67.0 87 42.5
Atru.chr4.1933 Acer truncatum HOM05D005475 ORTHO05D006575 1.1e-09 66.6 65 52.3
Actinidia11364 Actinidia chinensis HOM05D005475 ORTHO05D006575 1.1e-09 66.6 70 47.1
CARHR127400 Cardamine hirsuta HOM05D005475 ORTHO05D006575 1.1e-09 66.6 70 48.6
Potri.008G170700 Populus trichocarpa HOM05D005475 ORTHO05D006575 1.1e-09 66.6 73 47.9
Cc03_g06010 Coffea canephora HOM05D005475 ORTHO05D006575 1.4e-09 66.2 72 47.2
Nn3g19747 Nelumbo nucifera HOM05D005475 ORTHO05D006575 1.4e-09 66.2 73 47.9
AL4G29060 Arabidopsis lyrata HOM05D005475 ORTHO05D006575 2.4e-09 65.5 70 48.6
BcaC02g07831 Brassica carinata HOM05D005475 ORTHO05D006575 2.4e-09 65.5 57 54.4
C04p62850 Brassica napus HOM05D005475 ORTHO05D006575 2.4e-09 65.5 57 54.4
BolC4t27768H Brassica oleracea HOM05D005475 ORTHO05D006575 2.4e-09 65.5 57 54.4
Thhalv10017471m.g Eutrema salsugineum HOM05D005475 ORTHO05D006575 2.4e-09 65.5 70 48.6
SalBow3G2868 Salvia bowleyana HOM05D005475 ORTHO05D006575 2.4e-09 65.5 69 49.3
MBI10_g38466_MAGBIO Magnolia biondii HOM05D005475 ORTHO05D006575 3.2e-09 65.1 79 46.8
TAR362G0816 Trochodendron aralioides HOM05D005475 ORTHO05D006575 3.2e-09 65.1 89 42.7
vmacro08540 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 4.2e-09 64.7 57 57.9
MBI07_g18714_MAGBIO Magnolia biondii HOM05D005475 ORTHO05D006575 5.4e-09 64.3 63 49.2
Sp4g15710 Schrenkiella parvula HOM05D005475 ORTHO05D006575 5.4e-09 64.3 70 45.7
Aa31LG5G3900 Aethionema arabicum HOM05D005475 ORTHO05D006575 7.1e-09 63.9 70 47.1
Carub.0004s1502 Capsella rubella HOM05D005475 ORTHO05D006575 7.1e-09 63.9 70 44.3
Sabra08G0130500 Salix brachista HOM05D005475 ORTHO05D006575 7.1e-09 63.9 72 43.1
ClCG05G004080 Citrullus lanatus HOM05D005475 ORTHO05D006575 9.3e-09 63.5 70 48.6
ECA248G3571 Erigeron canadensis HOM05D000730 ORTHO05D000578 9.3e-09 63.5 70 50.0
FAN17G2060 Fragaria x ananassa HOM05D005475 ORTHO05D006575 9.3e-09 63.5 62 51.6
Sed0012950 Sechium edule HOM05D005475 ORTHO05D006575 9.3e-09 63.5 70 48.6
BcaB02g10558 Brassica carinata HOM05D005475 ORTHO05D006575 1.2e-08 63.2 69 44.9
Duzib212G0290 Durio zibethinus HOM05D005475 ORTHO05D006575 1.2e-08 63.2 70 48.6
AT2G33390 Arabidopsis thaliana HOM05D005475 ORTHO05D006575 1.6e-08 62.8 70 47.1
BcaB06g28682 Brassica carinata HOM05D005475 ORTHO05D006575 2.1e-08 62.4 57 50.9
A03p18710 Brassica napus HOM05D005475 ORTHO05D006575 2.1e-08 62.4 57 54.4
BraA03t11131Z Brassica rapa HOM05D005475 ORTHO05D006575 2.1e-08 62.4 57 54.4
BraA05t20157Z Brassica rapa HOM05D005475 ORTHO05D006575 2.1e-08 62.4 82 40.2
PSO674G0109 Papaver somniferum HOM05D005475 ORTHO05D006575 2.1e-08 62.4 99 39.4
PSO832G2786 Papaver somniferum HOM05D005475 ORTHO05D006575 2.1e-08 62.4 99 39.4
A04p25690 Brassica napus HOM05D005475 ORTHO05D006575 2.7e-08 62.0 57 50.9
BraA04t18073Z Brassica rapa HOM05D005475 ORTHO05D006575 2.7e-08 62.0 57 50.9
Migut.N00292 Erythranthe guttata HOM05D005475 ORTHO05D006575 3.5e-08 61.6 68 52.9
Gohir.A10G108400 Gossypium hirsutum HOM05D005475 ORTHO05D006575 3.5e-08 61.6 70 48.6
Phvul.L002444 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 3.5e-08 61.6 72 50.0
Sed0016324 Sechium edule HOM05D005475 ORTHO05D006575 3.5e-08 61.6 70 47.1
A05p12130 Brassica napus HOM05D005475 ORTHO05D006575 4.6e-08 61.2 65 47.7
Sopen09g033470 Solanum pennellii HOM05D005475 ORTHO05D006575 4.6e-08 61.2 70 45.7
PGSC0003DMG400017155 Solanum tuberosum HOM05D005475 ORTHO05D006575 4.6e-08 61.2 70 45.7
VMungo0720G1758 Vigna mungo HOM05D005475 ORTHO05D006575 4.6e-08 61.2 72 50.0
C03p21860 Brassica napus HOM05D005475 ORTHO05D006575 6.0e-08 60.8 57 54.4
BolC3t14568H Brassica oleracea HOM05D005475 ORTHO05D006575 6.0e-08 60.8 57 54.4
Glyma.10G189800 Glycine max HOM05D005475 ORTHO05D006575 6.0e-08 60.8 73 49.3
TPR.G28846 Trifolium pratense HOM05D005475 ORTHO05D006575 6.0e-08 60.8 69 49.3
vmacro15470 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 6.0e-08 60.8 72 47.2
Gohir.D10G159400 Gossypium hirsutum HOM05D005475 ORTHO05D006575 7.8e-08 60.5 70 47.1
Gorai.011G179000 Gossypium raimondii HOM05D005475 ORTHO05D006575 7.8e-08 60.5 70 47.1
C04p15700 Brassica napus HOM05D005475 ORTHO05D006575 1.0e-07 60.1 65 46.2
BolC4t23138H Brassica oleracea HOM05D005475 ORTHO05D006575 1.0e-07 60.1 65 46.2
CSS0013344 Camellia sinensis var. sinensis HOM05D005475 ORTHO05D006575 1.3e-07 59.7 56 57.1
Rhsim02G0042800 Rhododendron simsii HOM05D005475 ORTHO05D006575 1.7e-07 59.3 83 44.6
BcaC01g05844 Brassica carinata HOM05D005475 ORTHO05D006575 2.3e-07 58.9 56 51.8
Lj6g0010293 Lotus japonicus HOM05D005475 ORTHO05D006575 2.3e-07 58.9 87 41.4
Hund03078 Selenicereus undatus HOM05D005475 ORTHO05D006575 2.3e-07 58.9 74 45.9
Thecc.04G261900 Theobroma cacao HOM05D005475 ORTHO05D006575 3.0e-07 58.5 70 44.3
BcaC02g11426 Brassica carinata HOM05D005475 ORTHO05D006575 3.9e-07 58.2 64 43.8
Aqoxy2G03723 Aquilegia oxysepala HOM05D005475 ORTHO05D006575 5.1e-07 57.8 57 49.1
Medtr1g073660 Medicago truncatula HOM05D005475 ORTHO05D006575 5.1e-07 57.8 96 39.6
Actinidia20831 Actinidia chinensis HOM05D005475 ORTHO05D006575 6.6e-07 57.4 86 38.4
Manes.03G160400 Manihot esculenta HOM05D005475 ORTHO05D006575 1.1e-06 56.6 47 55.3
FAN12G1687 Fragaria x ananassa HOM05D005475 ORTHO05D006575 1.5e-06 56.2 51 52.9
Psat6g117200 Pisum sativum HOM05D005475 ORTHO05D006575 1.5e-06 56.2 71 43.7
BcaC07g37337 Brassica carinata HOM05D005475 ORTHO05D006575 3.3e-06 55.1 57 47.4
C08p07780 Brassica napus HOM05D005475 ORTHO05D006575 3.3e-06 55.1 57 47.4
BolC8t47626H Brassica oleracea HOM05D005475 ORTHO05D006575 3.3e-06 55.1 57 47.4
Migut.G00489 Erythranthe guttata HOM05D005475 ORTHO05D006575 3.3e-06 55.1 66 43.9
Sc13g0006140 Simmondsia chinensis HOM05D005475 ORTHO05D006575 4.3e-06 54.7 50 50.0
QL06p020702 Quercus lobata HOM05D005475 ORTHO05D006575 5.6e-06 54.3 69 44.9
Medtr1g045370 Medicago truncatula HOM05D005475 ORTHO05D006575 9.6e-06 53.5 71 45.1


User provided reference genes

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