Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0016336 Sechium edule HOM05D006686 ORTHO05D008463 1.1e-228 796.2 381 100.0
ClCG10G007390 Citrullus lanatus HOM05D006686 ORTHO05D008463 9.4e-204 713.4 364 92.0
MELO3C016473.2 Cucumis melo HOM05D006686 ORTHO05D008463 3.6e-203 711.4 364 91.2
CsaV3_3G006630 Cucumis sativus L. HOM05D006686 ORTHO05D008463 4.0e-202 708.0 364 90.9
RcHm_v2.0_Chr7g0220181 Rosa chinensis HOM05D006686 ORTHO05D008463 3.6e-187 658.3 364 83.8
Duzib235G0699 Durio zibethinus HOM05D006686 ORTHO05D008463 6.1e-187 657.5 364 83.2
QL02p103152 Quercus lobata HOM05D006686 ORTHO05D008463 8.9e-186 653.7 369 82.1
Manes.07G028500 Manihot esculenta HOM05D006686 ORTHO05D008463 2.0e-185 652.5 364 82.7
Thecc.06G000500 Theobroma cacao HOM05D006686 ORTHO05D008463 2.6e-185 652.1 364 83.5
Cfa004450 Carpinus fangiana HOM05D006686 ORTHO05D008463 9.8e-185 650.2 364 83.0
FvH4_5g27990 Fragaria vesca HOM05D006686 ORTHO05D008463 1.3e-184 649.8 364 82.7
FAN04G2541 Fragaria x ananassa HOM05D006686 ORTHO05D008463 6.4e-184 647.5 364 82.1
Potri.004G228500 Populus trichocarpa HOM05D006686 ORTHO05D008463 6.4e-184 647.5 364 81.0
Gorai.011G003800 Gossypium raimondii HOM05D006686 ORTHO05D008463 1.1e-183 646.7 364 81.3
Sabra01G0173400 Salix brachista HOM05D006686 ORTHO05D008463 1.1e-183 646.7 364 80.8
COL.COLO4_26876 Corchorus olitorius HOM05D006686 ORTHO05D008463 1.4e-183 646.4 372 81.7
Gohir.A10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 1.9e-183 646.0 364 81.3
Gohir.D10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 4.1e-183 644.8 364 81.0
MD08G1247400 Malus domestica HOM05D006686 ORTHO05D008463 4.1e-183 644.8 364 81.9
FAN18G1657 Fragaria x ananassa HOM05D006686 ORTHO05D008463 9.2e-183 643.7 369 81.6
CANSAT01G1449 Cannabis sativa HOM05D006686 ORTHO05D008463 1.2e-182 643.3 368 81.2
GSVIVG01023154001 Vitis vinifera HOM05D006686 ORTHO05D008463 2.0e-182 642.5 364 81.6
Prupe.1G584700 Prunus persica HOM05D006686 ORTHO05D008463 6.0e-182 641.0 382 79.8
Lj4g0021342 Lotus japonicus HOM05D006686 ORTHO05D008463 1.5e-180 636.3 364 80.5
THA.LOC104809035 Tarenaya hassleriana HOM05D006686 ORTHO05D008463 1.5e-180 636.3 363 80.7
PGR042G1861 Punica granatum HOM05D006686 ORTHO05D008463 9.5e-180 633.6 364 79.4
TWI59G1206 Tripterygium wilfordii HOM05D006686 ORTHO05D008463 8.9e-178 627.1 364 79.9
Dinv29673 Davidia involucrata HOM05D006686 ORTHO05D008463 7.5e-177 624.0 364 78.6
Eucgr.G00081 Eucalyptus grandis HOM05D006686 ORTHO05D008463 1.7e-176 622.9 364 78.6
Nn5g27352 Nelumbo nucifera HOM05D006686 ORTHO05D008463 2.9e-176 622.1 368 78.5
Aa31LG3G6890 Aethionema arabicum HOM05D006686 ORTHO05D008463 4.9e-176 621.3 365 78.9
CSS0008654 Camellia sinensis var. sinensis HOM05D006686 ORTHO05D008463 6.4e-176 620.9 364 78.3
TAR381G1724 Trochodendron aralioides HOM05D006686 ORTHO05D008463 8.3e-176 620.5 365 78.6
vmacro19835 Vaccinium macrocarpon HOM05D006686 ORTHO05D008463 1.1e-175 620.2 364 77.7
arahy.Tifrunner.gnm1.ann1.KKPS0T Arachis hypogaea HOM05D006686 ORTHO05D003399 1.9e-175 619.4 368 78.3
MSTRG.16472 Avicennia marina HOM05D006686 ORTHO05D008463 2.4e-175 619.0 366 77.6
arahy.Tifrunner.gnm1.ann1.A5H9W7 Arachis hypogaea HOM05D006686 ORTHO05D008463 9.2e-175 617.1 367 78.2
Migut.B00728 Erythranthe guttata HOM05D006686 ORTHO05D008463 1.6e-174 616.3 365 77.8
HanXRQChr01g0013991 Helianthus annuus HOM05D006686 ORTHO05D008463 2.1e-174 615.9 364 76.9
VMungo1215G3175 Vigna mungo HOM05D006686 ORTHO05D008463 3.5e-174 615.1 364 78.3
Phvul.003G075600 Phaseolus vulgaris HOM05D006686 ORTHO05D008463 4.6e-174 614.8 364 78.0
DCAR_022282 Daucus carota HOM05D006686 ORTHO05D008463 6.0e-174 614.4 364 76.9
Sp4g17050 Schrenkiella parvula HOM05D006686 ORTHO05D008463 7.8e-174 614.0 364 78.6
BcaB01g02944 Brassica carinata HOM05D006686 ORTHO05D008463 1.7e-173 612.8 364 78.6
C03p33220 Brassica napus HOM05D006686 ORTHO05D008463 5.1e-173 611.3 364 78.3
AL4G13300 Arabidopsis lyrata HOM05D006686 ORTHO05D008463 6.6e-173 610.9 365 78.1
MBI03_g20875_MAGBIO Magnolia biondii HOM05D006686 ORTHO05D008463 6.6e-173 610.9 363 78.0
Sp6g11350 Schrenkiella parvula HOM05D006686 ORTHO05D008463 8.6e-173 610.5 364 77.7
BcaC01g04848 Brassica carinata HOM05D006686 ORTHO05D008463 1.1e-172 610.1 364 78.0
BolC3t15644H Brassica oleracea HOM05D006686 ORTHO05D008463 1.1e-172 610.1 364 78.0
Thhalv10013635m.g Eutrema salsugineum HOM05D006686 ORTHO05D008463 1.1e-172 610.1 364 78.3
Glyma.07G273000 Glycine max HOM05D006686 ORTHO05D008463 1.1e-172 610.1 367 76.6
ECA236G4971 Erigeron canadensis HOM05D006686 ORTHO05D008463 1.9e-172 609.4 364 76.1
Carub.0004s0259 Capsella rubella HOM05D006686 ORTHO05D008463 4.3e-172 608.2 364 77.7
BraA03t11965Z Brassica rapa HOM05D006686 ORTHO05D008463 7.3e-172 607.4 364 77.7
Ah.03g136810 Amaranthus hybridus HOM05D006686 ORTHO05D008463 9.5e-172 607.1 365 76.7
AT2G23390 Arabidopsis thaliana HOM05D006686 ORTHO05D008463 1.6e-171 606.3 364 76.9
Cc02_g23500 Coffea canephora HOM05D006686 ORTHO05D008463 2.8e-171 605.5 364 76.6
SGA_v2.0_scaffold254G45251 Striga asiatica HOM05D006686 ORTHO05D008463 5.2e-170 601.3 375 74.7
Ca_13532_v3 Cicer arietinum L. HOM05D006686 ORTHO05D008463 1.5e-169 599.7 365 75.3
PSO210G5299 Papaver somniferum HOM05D006686 ORTHO05D008463 2.6e-169 599.0 365 75.6
Lsat_1_v5_gn_7_75180 Lactuca sativa HOM05D006686 ORTHO05D008463 3.4e-169 598.6 375 73.6
Lalb_Chr07g0176791 Lupinus albus HOM05D006686 ORTHO05D008463 1.7e-168 596.3 360 76.7
Nitab4.5_0001129g0010 Nicotiana tabacum HOM05D006686 ORTHO05D008463 2.2e-168 595.9 365 75.3
ATR1089G117 Amborella trichopoda HOM05D006686 ORTHO05D008463 2.9e-168 595.5 365 74.8
unitig_22.g6102 Utricularia gibba HOM05D006686 ORTHO05D008463 1.4e-167 593.2 374 74.6
Nitab4.5_0001057g0120 Nicotiana tabacum HOM05D006686 ORTHO05D008463 3.2e-167 592.0 365 74.2
CDE04G2622 Ceratophyllum demersum HOM05D006686 ORTHO05D008463 4.1e-167 591.7 364 73.6
A03p27520 Brassica napus HOM05D006686 ORTHO05D008463 5.4e-167 591.3 395 71.6
TPR.G5968 Trifolium pratense HOM05D006686 ORTHO05D008463 1.6e-166 589.7 367 74.9
Medtr4g134670 Medicago truncatula HOM05D006686 ORTHO05D008463 2.1e-166 589.3 367 74.9
Psat4g001080 Pisum sativum HOM05D006686 ORTHO05D008463 6.0e-166 587.8 364 72.8
PGSC0003DMG402024871 Solanum tuberosum HOM05D006686 ORTHO05D008463 1.0e-165 587.0 365 74.0
HPP92_005637 Vanilla planifolia HOM05D006686 ORTHO05D008463 3.0e-165 585.5 363 74.1
Solyc01g103110.3 Solanum lycopersicum HOM05D006686 ORTHO05D008463 6.6e-165 584.3 365 73.7
Sopen01g045530 Solanum pennellii HOM05D006686 ORTHO05D008463 3.3e-164 582.0 365 73.4
CAN.G855.45 Capsicum annuum HOM05D006686 ORTHO05D008463 7.3e-164 580.9 365 74.2
HPP92_005643 Vanilla planifolia HOM05D006686 ORTHO05D008463 3.6e-163 578.6 363 74.4
Lj9C281G9 Lonicera japonica HOM05D006686 ORTHO05D008463 6.2e-163 577.8 417 66.2
Peaxi162Scf00011g01843 Petunia axillaris HOM05D006686 ORTHO05D008463 1.1e-162 577.0 366 73.0
Cpa.g.sc113.25 Carica papaya HOM05D006686 ORTHO05D008463 3.8e-160 568.5 439 65.1
EL10Ac6g14006 Beta vulgaris HOM05D006686 ORTHO05D008463 2.7e-158 562.4 391 68.3
Os04g0442200 Oryza sativa ssp. japonica HOM05D006686 ORTHO05D008463 6.0e-158 561.2 365 70.1
Zm00001eb423040 Zea mays HOM05D006686 ORTHO05D008463 2.5e-156 555.8 364 70.6
CiPaw.06G176300 Carya illinoinensis HOM05D006686 ORTHO05D008463 1.4e-154 550.1 330 78.5
SEGI_40259 Sequoiadendron giganteum HOM05D006686 ORTHO05D008463 4.6e-150 535.0 346 71.1
Rhsim05G0116000 Rhododendron simsii HOM05D006686 ORTHO05D008463 2.1e-147 526.2 379 67.3
Atru.chr6.339 Acer truncatum HOM05D006686 ORTHO05D008463 1.1e-146 523.9 291 80.8
Ciclev10001220m.g Citrus clementina HOM05D006686 ORTHO05D008463 9.0e-146 520.8 374 67.6
Mapoly0007s0219 Marchantia polymorpha HOM05D006686 ORTHO05D008463 1.2e-142 510.4 363 64.7
Pp3c21_14930 Physcomitrium patens HOM05D006686 ORTHO05D008463 1.2e-142 510.4 364 64.6
AagrBONN_evm.TU.Sc2ySwM_362.840 Anthoceros agrestis HOM05D006686 ORTHO05D008463 5.1e-141 505.0 365 64.1
Aqoxy5G01865 Aquilegia oxysepala HOM05D006686 ORTHO05D008463 2.5e-132 476.1 367 62.1
SMO364G0094 Selaginella moellendorffii HOM05D006686 ORTHO05D008463 3.4e-129 465.7 341 62.8
Sc03g0004960 Simmondsia chinensis HOM05D006686 ORTHO05D008463 5.3e-122 441.8 370 57.8
PSO447G0166 Papaver somniferum HOM05D006686 ORTHO05D008463 3.8e-112 409.1 365 57.0
Haze_09995 Corylus avellana HOM05D006686 ORTHO05D008463 1.4e-106 390.6 216 83.3
Glyma.17G001600 Glycine max HOM05D006686 ORTHO05D008463 2.0e-97 360.1 259 69.5
Haze_27211 Corylus avellana HOM05D006686 ORTHO05D008463 3.6e-94 349.4 356 46.9
Cre09.g399626 Chlamydomonas reinhardtii HOM05D006686 ORTHO05D008463 2.4e-90 336.7 425 42.4
Actinidia01629 Actinidia chinensis HOM05D006686 ORTHO05D008463 5.3e-90 335.5 217 71.0
RcHm_v2.0_Chr7g0220471 Rosa chinensis HOM05D006686 ORTHO05D008463 4.8e-83 312.4 195 76.4
PRCOL_00000210 Prasinoderma coloniale HOM05D006686 ORTHO05D008463 2.0e-81 307.0 410 41.0
Oeu000154.1 Olea europaea HOM05D006686 ORTHO05D008463 3.6e-78 296.2 319 51.4
FAN08G3117 Fragaria x ananassa HOM05D006686 ORTHO05D008463 1.1e-71 274.6 163 76.7
CARHR293020 Cardamine hirsuta HOM05D006686 ORTHO05D008463 8.3e-67 258.5 159 74.8
Eucgr.A00755 Eucalyptus grandis HOM05D006686 ORTHO05D008463 8.6e-64 248.4 155 75.5
AUR62032459 Chenopodium quinoa HOM05D006686 ORTHO05D008463 9.6e-47 191.8 166 54.8
Nitab4.5_0004668g0030 Nicotiana tabacum HOM05D006686 ORTHO05D008463 5.6e-39 166.0 128 60.2
MELO3C032221.2 Cucumis melo HOM05D006686 ORTHO05D008463 1.3e-30 138.3 86 80.2
CBR_g48698 Chara braunii HOM05D006686 ORTHO05D008463 9.0e-29 132.1 133 53.4
Hund15396 Selenicereus undatus HOM05D006686 ORTHO05D008463 7.9e-25 119.0 73 75.3
Haze_09994 Corylus avellana HOM05D006686 ORTHO05D008463 1.3e-24 118.2 154 45.5
Actinidia26190 Actinidia chinensis HOM05D006686 ORTHO05D008463 3.0e-24 117.1 67 77.6
Haze_05751 Corylus avellana HOM05D006686 ORTHO05D008463 1.4e-18 98.2 75 65.3
Peaxi162Scf00011g01844 Petunia axillaris HOM05D006686 ORTHO05D008463 3.9e-16 90.1 130 41.5
CBR_g48699 Chara braunii HOM05D006686 ORTHO05D008463 2.7e-09 67.4 57 49.1
CiPaw.06G176500 Carya illinoinensis HOM05D006686 ORTHO05D008463 1.6e-06 58.2 29 82.8


User provided reference genes

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