Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0016253 Sechium edule HOM05D006100 ORTHO05D007539 1.4e-69 266.2 133 100.0
ClCG01G019510 Citrullus lanatus HOM05D006100 ORTHO05D007539 1.7e-43 179.5 131 72.5
CsaV3_6G046200 Cucumis sativus L. HOM05D006100 ORTHO05D007539 4.8e-38 161.4 134 69.4
MELO3C007824.2 Cucumis melo HOM05D006100 ORTHO05D007539 4.5e-28 128.3 107 68.2
Duzib147G1001 Durio zibethinus HOM05D006100 ORTHO05D007539 1.5e-26 123.2 132 54.5
QL06p045927 Quercus lobata HOM05D006100 ORTHO05D007539 2.5e-26 122.5 132 53.0
Thecc.01G036600 Theobroma cacao HOM05D006100 ORTHO05D007539 9.4e-26 120.6 131 54.2
Dinv39980 Davidia involucrata HOM05D006100 ORTHO05D007539 1.6e-25 119.8 133 52.6
COL.COLO4_22086 Corchorus olitorius HOM05D006100 ORTHO05D007539 1.4e-24 116.7 131 55.0
Ciclev10026748m.g Citrus clementina HOM05D006100 ORTHO05D007539 5.2e-24 114.8 139 53.2
TWI09G0021 Tripterygium wilfordii HOM05D006100 ORTHO05D007539 6.8e-24 114.4 126 54.0
Atru.chr3.567 Acer truncatum HOM05D006100 ORTHO05D007539 1.5e-23 113.2 128 50.0
Gohir.A10G094900 Gossypium hirsutum HOM05D006100 ORTHO05D007539 5.7e-23 111.3 130 53.1
Haze_15098 Corylus avellana HOM05D006100 ORTHO05D007539 9.8e-23 110.5 126 50.8
MD15G1262900 Malus domestica HOM05D006100 ORTHO05D007539 1.7e-22 109.8 136 50.7
Nitab4.5_0003233g0010 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.7e-22 109.8 136 51.5
Lj2g0016254 Lotus japonicus HOM05D006100 ORTHO05D007539 2.8e-22 109.0 97 66.0
Lsat_1_v5_gn_4_148381 Lactuca sativa HOM05D006100 ORTHO05D007539 3.7e-22 108.6 92 65.2
Prupe.7G153900 Prunus persica HOM05D006100 ORTHO05D007539 3.7e-22 108.6 131 51.9
Phvul.002G029900 Phaseolus vulgaris HOM05D006100 ORTHO05D007539 4.8e-22 108.2 107 59.8
Actinidia19182 Actinidia chinensis HOM05D006100 ORTHO05D007539 8.3e-22 107.5 141 48.9
BcaB07g29655 Brassica carinata HOM05D006100 ORTHO05D007539 1.1e-21 107.1 129 52.7
THA.LOC104821276 Tarenaya hassleriana HOM05D006100 ORTHO05D007539 1.1e-21 107.1 138 50.0
CSS0018588 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 1.4e-21 106.7 132 50.0
AT5G66780 Arabidopsis thaliana HOM05D006100 ORTHO05D007539 3.1e-21 105.5 135 48.9
AL8G44670 Arabidopsis lyrata HOM05D006100 ORTHO05D007539 7.0e-21 104.4 132 49.2
Duzib264G0645 Durio zibethinus HOM05D006100 ORTHO05D007539 7.0e-21 104.4 81 67.9
Thhalv10005154m.g Eutrema salsugineum HOM05D006100 ORTHO05D007539 7.0e-21 104.4 132 51.5
Carub.0008s2773 Capsella rubella HOM05D006100 ORTHO05D007539 1.6e-20 103.2 94 61.7
Lalb_Chr09g0322441 Lupinus albus HOM05D006100 ORTHO05D007539 1.6e-20 103.2 116 56.0
ECA232G0790 Erigeron canadensis HOM05D006100 ORTHO05D007539 2.0e-20 102.8 103 54.4
VMungo1215G0978 Vigna mungo HOM05D006100 ORTHO05D007539 2.7e-20 102.4 98 61.2
Sp2g29900 Schrenkiella parvula HOM05D006100 ORTHO05D007539 3.5e-20 102.1 131 49.6
BcaC06g34744 Brassica carinata HOM05D006100 ORTHO05D007539 7.7e-20 100.9 133 50.4
C07p25000 Brassica napus HOM05D006100 ORTHO05D007539 7.7e-20 100.9 133 50.4
Gohir.A11G184500 Gossypium hirsutum HOM05D006100 ORTHO05D007539 7.7e-20 100.9 104 57.7
BolC7t43033H Brassica oleracea HOM05D006100 ORTHO05D007539 1.0e-19 100.5 133 50.4
FAN23G1739 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.0e-19 100.5 136 45.6
FvH4_1g13380 Fragaria vesca HOM05D006100 ORTHO05D007539 1.7e-19 99.8 141 47.5
HanXRQChr11g0324821 Helianthus annuus HOM05D006100 ORTHO05D007539 1.7e-19 99.8 89 60.7
Aqoxy6G01099 Aquilegia oxysepala HOM05D006100 ORTHO05D007539 2.3e-19 99.4 128 43.8
CARHR280920 Cardamine hirsuta HOM05D006100 ORTHO05D007539 2.9e-19 99.0 130 47.7
Gohir.D10G093000 Gossypium hirsutum HOM05D006100 ORTHO05D007539 3.8e-19 98.6 130 49.2
Medtr5g020060 Medicago truncatula HOM05D006100 ORTHO05D007539 3.8e-19 98.6 71 71.8
Solyc02g062770.2 Solanum lycopersicum HOM05D006100 ORTHO05D007539 3.8e-19 98.6 132 43.9
A07p17150 Brassica napus HOM05D006100 ORTHO05D007539 5.0e-19 98.2 130 48.5
BraA07t29442Z Brassica rapa HOM05D006100 ORTHO05D007539 5.0e-19 98.2 130 48.5
FAN19G2702 Fragaria x ananassa HOM05D006100 ORTHO05D007539 5.0e-19 98.2 141 46.8
Rhsim08G0115500 Rhododendron simsii HOM05D006100 ORTHO05D007539 5.0e-19 98.2 136 45.6
Psat2g159960 Pisum sativum HOM05D006100 ORTHO05D007539 6.6e-19 97.8 98 55.1
CiPaw.02G017200 Carya illinoinensis HOM05D006100 ORTHO05D007539 1.1e-18 97.1 77 64.9
Cfa004303 Carpinus fangiana HOM05D006100 ORTHO05D007539 1.5e-18 96.7 136 45.6
CiPaw.01G037400 Carya illinoinensis HOM05D006100 ORTHO05D007539 3.3e-18 95.5 82 63.4
Nitab4.5_0000136g0440 Nicotiana tabacum HOM05D006100 ORTHO05D007539 3.3e-18 95.5 160 44.4
arahy.Tifrunner.gnm1.ann1.L1JEHI Arachis hypogaea HOM05D006100 ORTHO05D007539 9.5e-18 94.0 142 44.4
Sopen02g013800 Solanum pennellii HOM05D006100 ORTHO05D007539 9.5e-18 94.0 134 44.8
arahy.Tifrunner.gnm1.ann1.IKK69W Arachis hypogaea HOM05D006100 ORTHO05D007539 1.2e-17 93.6 142 43.7
BcaB02g09991 Brassica carinata HOM05D006100 ORTHO05D007539 1.2e-17 93.6 139 47.5
FvH4_1g13390 Fragaria vesca HOM05D006100 ORTHO05D007539 3.6e-17 92.0 119 48.7
FAN19G3207 Fragaria x ananassa HOM05D006100 ORTHO05D007539 3.6e-17 92.0 119 48.7
FAN26G0501 Fragaria x ananassa HOM05D006100 ORTHO05D007539 3.6e-17 92.0 132 44.7
PGR102G3048 Punica granatum HOM05D006100 ORTHO05D007539 4.7e-17 91.7 117 48.7
FAN28G1903 Fragaria x ananassa HOM05D006100 ORTHO05D007539 8.0e-17 90.9 119 47.1
RcHm_v2.0_Chr2g0101741 Rosa chinensis HOM05D006100 ORTHO05D007539 8.0e-17 90.9 137 44.5
PSO675G2321 Papaver somniferum HOM05D006100 ORTHO05D007539 1.0e-16 90.5 157 41.4
PGR119G0418 Punica granatum HOM05D006100 ORTHO05D007539 1.0e-16 90.5 97 52.6
MD02G1148600 Malus domestica HOM05D006100 ORTHO05D007539 1.4e-16 90.1 81 60.5
Oeu041448.1 Olea europaea HOM05D006100 ORTHO05D007539 1.8e-16 89.7 129 48.1
Nn5g29589 Nelumbo nucifera HOM05D006100 ORTHO05D007539 3.0e-16 89.0 134 45.5
Oeu009416.1 Olea europaea HOM05D006100 ORTHO05D007539 3.0e-16 89.0 129 46.5
MSTRG.2759 Avicennia marina HOM05D006100 ORTHO05D007539 4.0e-16 88.6 129 45.7
Aa31LG1G15340 Aethionema arabicum HOM05D006100 ORTHO05D007539 8.9e-16 87.4 72 65.3
BcaC03g18400 Brassica carinata HOM05D006100 ORTHO05D007539 8.9e-16 87.4 70 64.3
CANSAT01G1084 Cannabis sativa HOM05D006100 ORTHO05D007539 1.2e-15 87.0 123 49.6
Nitab4.5_0001385g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.2e-15 87.0 133 47.4
TAR376G0804 Trochodendron aralioides HOM05D001794 ORTHO05D004177 1.5e-15 86.7 108 44.4
A02p44400 Brassica napus HOM05D006100 ORTHO05D007539 2.0e-15 86.3 120 50.0
C02p64790 Brassica napus HOM05D006100 ORTHO05D007539 2.0e-15 86.3 66 66.7
BolC2t12540H Brassica oleracea HOM05D006100 ORTHO05D007539 2.0e-15 86.3 66 66.7
BraA02t09357Z Brassica rapa HOM05D006100 ORTHO05D007539 2.0e-15 86.3 120 50.0
MD15G1262800 Malus domestica HOM05D006100 ORTHO05D007539 2.0e-15 86.3 78 59.0
RcHm_v2.0_Chr2g0101751 Rosa chinensis HOM05D006100 ORTHO05D007539 2.0e-15 86.3 129 43.4
vmacro17841 Vaccinium macrocarpon HOM05D006100 ORTHO05D007539 2.0e-15 86.3 78 59.0
Os03g0723400 Oryza sativa ssp. japonica HOM05D006100 ORTHO05D007539 3.4e-15 85.5 73 63.0
Cpa.g.sc6.110 Carica papaya HOM05D006100 ORTHO05D007539 5.7e-15 84.7 135 45.2
Eucgr.I02450 Eucalyptus grandis HOM05D006100 ORTHO05D007539 7.5e-15 84.3 114 47.4
Manes.01G135000 Manihot esculenta HOM05D006100 ORTHO05D007539 7.5e-15 84.3 86 52.3
PSO541G1538 Papaver somniferum HOM05D006100 ORTHO05D007539 7.5e-15 84.3 90 55.6
Glyma.11G067900 Glycine max HOM05D006100 ORTHO05D007539 9.8e-15 84.0 93 51.6
Nitab4.5_0000434g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 9.8e-15 84.0 134 47.0
PGSC0003DMG400015478 Solanum tuberosum HOM05D006100 ORTHO05D007539 9.8e-15 84.0 130 42.3
Migut.H00995 Erythranthe guttata HOM05D006100 ORTHO05D007539 2.2e-14 82.8 136 47.8
FAN28G0382 Fragaria x ananassa HOM05D006100 ORTHO05D007539 4.9e-14 81.6 67 64.2
FAN23G0264 Fragaria x ananassa HOM05D006100 ORTHO05D007539 8.3e-14 80.9 83 54.2
MD02G1148700 Malus domestica HOM05D006100 ORTHO05D007539 8.3e-14 80.9 128 39.8
Peaxi162Scf00515g00519 Petunia axillaris HOM05D006100 ORTHO05D007539 8.3e-14 80.9 133 43.6
GSVIVG01018974001 Vitis vinifera HOM05D006100 ORTHO05D007539 8.3e-14 80.9 135 42.2
CAN.G358.97 Capsicum annuum HOM05D006100 ORTHO05D007539 1.6e-12 76.6 135 43.0
SGA_v2.0_scaffold276G46633 Striga asiatica HOM05D006100 ORTHO05D007539 2.0e-12 76.3 144 44.4
Gorai.011G102200 Gossypium raimondii HOM05D006100 ORTHO05D007539 1.7e-11 73.2 94 48.9
FAN26G1330 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.3e-11 72.8 66 60.6
Glyma.16G140500 Glycine max HOM05D006100 ORTHO05D007539 2.3e-11 72.8 114 44.7
Peaxi162Scf00008g03716 Petunia axillaris HOM05D006100 ORTHO05D007539 3.9e-11 72.0 128 39.8
Prupe.7G153800 Prunus persica HOM05D006100 ORTHO05D007539 8.6e-11 70.9 66 60.6
AUR62007561 Chenopodium quinoa HOM05D006100 ORTHO05D007539 1.1e-10 70.5 109 41.3
TPR.G34229 Trifolium pratense HOM05D006100 ORTHO05D007539 1.5e-10 70.1 106 42.5
AUR62004046 Chenopodium quinoa HOM05D006100 ORTHO05D007539 3.3e-10 68.9 91 48.4
EL10Ac6g15568 Beta vulgaris HOM05D006100 ORTHO05D007539 7.3e-10 67.8 133 39.8
CSS0029658 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 9.5e-10 67.4 100 42.0
Sopen02g030020 Solanum pennellii HOM05D006100 ORTHO05D007539 3.6e-09 65.5 129 41.9
Solyc02g085330.1 Solanum lycopersicum HOM05D006100 ORTHO05D007539 6.1e-09 64.7 77 54.5
DCAR_025920 Daucus carota HOM05D006100 ORTHO05D007539 1.0e-08 63.9 69 53.6
unitig_899.g14492 Utricularia gibba HOM05D006100 ORTHO05D007539 5.2e-08 61.6 76 50.0
MBI16_g38642_MAGBIO Magnolia biondii HOM05D006100 ORTHO05D007539 1.2e-07 60.5 85 48.2
Oeu033643.1 Olea europaea HOM05D006100 ORTHO05D007539 2.0e-07 59.7 52 65.4
CDE01G0731 Ceratophyllum demersum HOM05D006100 ORTHO05D007539 5.8e-07 58.2 87 43.7
unitig_21.g20955 Utricularia gibba HOM05D003234 ORTHO05D003635 5.8e-07 58.2 92 47.8
HanXRQChr16g0530351 Helianthus annuus HOM05D006100 ORTHO05D007539 1.3e-06 57.0 83 42.2
Lj4g0020328 Lotus japonicus HOM05D006100 ORTHO05D007539 2.9e-06 55.8 103 38.8


User provided reference genes

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