Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0016198 Sechium edule HOM05D003886 ORTHO05D004587 1.3e-252 875.9 442 100.0
MELO3C015232.2 Cucumis melo HOM05D003886 ORTHO05D004587 3.0e-225 785.0 450 88.4
CsaV3_1G038140 Cucumis sativus L. HOM05D003886 ORTHO05D004587 3.9e-225 784.6 450 88.4
Cfa002157 Carpinus fangiana HOM05D003886 ORTHO05D004587 5.1e-193 677.9 456 76.1
QL05p085089 Quercus lobata HOM05D003886 ORTHO05D004587 1.5e-192 676.4 463 75.2
CiPaw.01G092000 Carya illinoinensis HOM05D003886 ORTHO05D004587 4.5e-189 664.8 455 74.1
Thecc.06G049000 Theobroma cacao HOM05D003886 ORTHO05D004587 1.8e-185 652.9 455 74.3
Prupe.3G028400 Prunus persica HOM05D003886 ORTHO05D004587 3.0e-185 652.1 463 72.6
Lj2g0000910 Lotus japonicus HOM05D003886 ORTHO05D004587 2.1e-183 646.0 446 74.0
Atru.chr3.1841 Acer truncatum HOM05D003886 ORTHO05D004587 2.8e-183 645.6 471 71.3
MD09G1170200 Malus domestica HOM05D003886 ORTHO05D004587 2.8e-183 645.6 450 73.6
TWI75G0340 Tripterygium wilfordii HOM05D003886 ORTHO05D004587 8.2e-183 644.0 451 72.3
Gohir.D10G001000 Gossypium hirsutum HOM05D003886 ORTHO05D004587 1.1e-182 643.7 454 73.1
Gorai.011G001300 Gossypium raimondii HOM05D003886 ORTHO05D004587 1.4e-182 643.3 454 73.1
Dinv24535 Davidia involucrata HOM05D003886 ORTHO05D004587 1.8e-182 642.9 453 72.6
Manes.15G112100 Manihot esculenta HOM05D003886 ORTHO05D004587 2.4e-182 642.5 455 73.0
MD17G1156900 Malus domestica HOM05D003886 ORTHO05D004587 5.3e-182 641.3 458 71.6
Gohir.A10G000800 Gossypium hirsutum HOM05D003886 ORTHO05D004587 9.0e-182 640.6 454 73.1
Dinv30973 Davidia involucrata HOM05D003886 ORTHO05D004587 2.6e-181 639.0 435 74.3
Rhsim11G0111800 Rhododendron simsii HOM05D003886 ORTHO05D004587 1.1e-179 633.6 450 72.7
GSVIVG01000280001 Vitis vinifera HOM05D003886 ORTHO05D004587 1.1e-179 633.6 454 71.8
Phvul.004G065600 Phaseolus vulgaris HOM05D003886 ORTHO05D004587 3.2e-179 632.1 448 72.8
VMungo0464G1314 Vigna mungo HOM05D003886 ORTHO05D004587 5.5e-179 631.3 447 72.7
Glyma.19G049500 Glycine max HOM05D003886 ORTHO05D004587 7.9e-178 627.5 447 71.1
TWI12G0365 Tripterygium wilfordii HOM05D003886 ORTHO05D004587 3.9e-177 625.2 436 70.9
Ca_17750_v3 Cicer arietinum L. HOM05D003886 ORTHO05D004587 5.1e-177 624.8 448 71.0
Glyma.13G045600 Glycine max HOM05D003886 ORTHO05D004587 5.1e-177 624.8 447 71.4
Manes.03G095300 Manihot esculenta HOM05D003886 ORTHO05D004587 5.1e-177 624.8 456 72.1
Duzib235G0758 Durio zibethinus HOM05D003886 ORTHO05D004587 1.5e-176 623.2 454 71.4
FAN05G1128 Fragaria x ananassa HOM05D003886 ORTHO05D004587 9.7e-176 620.5 458 70.7
FAN14G1097 Fragaria x ananassa HOM05D003886 ORTHO05D004587 1.3e-175 620.2 458 70.7
FAN09G1502 Fragaria x ananassa HOM05D003886 ORTHO05D004587 2.2e-175 619.4 458 70.7
Lalb_Chr21g0317801 Lupinus albus HOM05D003886 ORTHO05D004587 2.2e-175 619.4 455 69.9
Actinidia17720 Actinidia chinensis HOM05D003886 ORTHO05D004587 4.8e-175 618.2 445 70.8
EL10Ac9g21865 Beta vulgaris HOM05D003886 ORTHO05D004587 8.2e-175 617.5 447 70.9
CSS0008969 Camellia sinensis var. sinensis HOM05D003886 ORTHO05D004587 1.8e-174 616.3 445 70.3
AUR62016582 Chenopodium quinoa HOM05D003886 ORTHO05D004587 5.3e-174 614.8 445 71.9
Ah.01g020350 Amaranthus hybridus HOM05D003886 ORTHO05D004587 2.0e-173 612.8 446 70.9
FAN14G2559 Fragaria x ananassa HOM05D003886 ORTHO05D004587 2.0e-173 612.8 458 70.3
FvH4_6g36310 Fragaria vesca HOM05D003886 ORTHO05D004587 4.5e-173 611.7 458 70.3
CSS0041623 Camellia sinensis var. sinensis HOM05D003886 ORTHO05D004587 5.9e-173 611.3 445 70.8
AUR62011474 Chenopodium quinoa HOM05D003886 ORTHO05D004587 7.7e-173 610.9 451 70.5
CANSAT01G1565 Cannabis sativa HOM05D003886 ORTHO05D004587 1.0e-172 610.5 465 69.5
Sabra14G0003200 Salix brachista HOM05D003886 ORTHO05D004587 1.7e-172 609.8 476 69.1
THA.LOC104808112 Tarenaya hassleriana HOM05D003886 ORTHO05D004587 1.7e-172 609.8 455 70.1
RcHm_v2.0_Chr2g0148321 Rosa chinensis HOM05D003886 ORTHO05D004587 1.4e-171 606.7 461 69.4
Migut.N00997 Erythranthe guttata HOM05D003886 ORTHO05D004587 5.5e-171 604.7 454 68.9
Potri.014G000600 Populus trichocarpa HOM05D003886 ORTHO05D004587 5.5e-171 604.7 477 68.3
Nn7g35782 Nelumbo nucifera HOM05D003886 ORTHO05D004587 9.4e-171 604.0 450 69.1
MSTRG.27896 Avicennia marina HOM05D003886 ORTHO05D004587 2.1e-170 602.8 448 69.0
Cc02_g36820 Coffea canephora HOM05D003886 ORTHO05D004587 2.7e-170 602.4 455 71.0
PGR102G2920 Punica granatum HOM05D003886 ORTHO05D004587 2.7e-170 602.4 469 69.9
Medtr8g090035 Medicago truncatula HOM05D003886 ORTHO05D004587 4.6e-170 601.7 456 68.9
TAR624G0406 Trochodendron aralioides HOM05D003886 ORTHO05D004587 1.4e-169 600.1 442 69.0
vmacro01641 Vaccinium macrocarpon HOM05D003886 ORTHO05D004587 2.3e-169 599.4 486 65.4
Ciclev10020009m.g Citrus clementina HOM05D003886 ORTHO05D004587 3.9e-169 598.6 465 67.7
Eucgr.F04066 Eucalyptus grandis HOM05D003886 ORTHO05D004587 3.9e-169 598.6 446 70.2
MSTRG.5179 Avicennia marina HOM05D003886 ORTHO05D004587 6.7e-169 597.8 425 72.0
COL.COLO4_26802 Corchorus olitorius HOM05D003886 ORTHO05D004587 2.0e-168 596.3 454 69.2
Lalb_Chr06g0174541 Lupinus albus HOM05D003886 ORTHO05D004587 2.0e-168 596.3 449 69.5
Psat7g057280 Pisum sativum HOM05D003886 ORTHO05D004587 2.8e-167 592.4 449 69.3
arahy.Tifrunner.gnm1.ann1.Z0Z3SY Arachis hypogaea HOM05D003886 ORTHO05D004587 6.3e-167 591.3 486 64.8
TAR626G1553 Trochodendron aralioides HOM05D003886 ORTHO05D004587 2.4e-166 589.3 444 68.9
Aa31LG4G1970 Aethionema arabicum HOM05D003886 ORTHO05D004587 5.3e-166 588.2 437 69.8
Actinidia11710 Actinidia chinensis HOM05D003886 ORTHO05D004587 1.5e-165 586.6 425 71.1
Duzib192G0492 Durio zibethinus HOM05D003886 ORTHO05D004587 2.0e-165 586.3 447 69.6
Oeu000173.4 Olea europaea HOM05D003886 ORTHO05D004587 2.0e-165 586.3 533 59.7
Sc24g0001760 Simmondsia chinensis HOM05D003886 ORTHO05D004587 2.6e-165 585.9 447 68.2
HanXRQChr17g0545561 Helianthus annuus HOM05D003886 ORTHO05D004587 1.0e-164 583.9 446 70.6
Carub.0002s2589 Capsella rubella HOM05D003886 ORTHO05D004587 2.9e-164 582.4 450 68.0
Lalb_Chr04g0257491 Lupinus albus HOM05D003886 ORTHO05D004587 1.1e-163 580.5 447 66.2
Sp5g34070 Schrenkiella parvula HOM05D003886 ORTHO05D004587 1.2e-162 577.0 458 66.8
Thhalv10018536m.g Eutrema salsugineum HOM05D003886 ORTHO05D004587 4.7e-162 575.1 459 66.7
AT1G79020 Arabidopsis thaliana HOM05D003886 ORTHO05D004587 1.4e-161 573.5 448 67.2
Peaxi162Scf00048g01418 Petunia axillaris HOM05D003886 ORTHO05D004587 1.4e-161 573.5 445 67.6
AL2G39480 Arabidopsis lyrata HOM05D003886 ORTHO05D004587 2.3e-161 572.8 459 66.0
HanXRQChr17g0570801 Helianthus annuus HOM05D003886 ORTHO05D004587 2.3e-161 572.8 449 68.2
BolC6t40307H Brassica oleracea HOM05D003886 ORTHO05D004587 8.8e-161 570.9 457 66.1
BcaC08g47466 Brassica carinata HOM05D003886 ORTHO05D004587 1.5e-160 570.1 457 65.9
ECA234G0089 Erigeron canadensis HOM05D003886 ORTHO05D004587 9.7e-160 567.4 442 67.6
BraA07t31924Z Brassica rapa HOM05D003886 ORTHO05D004587 2.2e-159 566.2 439 67.0
Thhalv10007658m.g Eutrema salsugineum HOM05D003886 ORTHO05D004587 2.2e-159 566.2 449 67.3
A07p44160 Brassica napus HOM05D003886 ORTHO05D004587 2.8e-159 565.8 457 65.0
C06p52890 Brassica napus HOM05D003886 ORTHO05D004587 3.7e-159 565.5 458 65.9
Carub.0001s1642 Capsella rubella HOM05D003886 ORTHO05D004587 1.1e-158 563.9 448 67.6
Sopen02g026260 Solanum pennellii HOM05D003886 ORTHO05D004587 1.4e-158 563.5 451 65.6
CAN.G809.69 Capsicum annuum HOM05D003886 ORTHO05D004587 2.4e-158 562.8 453 65.3
BcaB02g07192 Brassica carinata HOM05D003886 ORTHO05D004587 4.1e-158 562.0 448 65.8
A02p22460 Brassica napus HOM05D003886 ORTHO05D004587 7.0e-158 561.2 449 67.3
Solyc02g032300.3 Solanum lycopersicum HOM05D003886 ORTHO05D004587 2.0e-157 559.7 438 66.9
Solyc02g081650.3 Solanum lycopersicum HOM05D003886 ORTHO05D004587 2.0e-157 559.7 451 65.4
PSO063G1610 Papaver somniferum HOM05D003886 ORTHO05D004587 2.6e-157 559.3 445 67.0
PGSC0003DMG400017734 Solanum tuberosum HOM05D003886 ORTHO05D004587 2.6e-157 559.3 450 65.1
Peaxi162Scf00198g01528 Petunia axillaris HOM05D003886 ORTHO05D004587 3.5e-157 558.9 455 64.8
Sopen02g010650 Solanum pennellii HOM05D003886 ORTHO05D004587 3.5e-157 558.9 438 66.9
C02p36140 Brassica napus HOM05D003886 ORTHO05D004587 5.9e-157 558.1 451 67.6
TPR.G6290 Trifolium pratense HOM05D003886 ORTHO05D004587 1.3e-156 557.0 419 69.0
PSO782G4625 Papaver somniferum HOM05D003886 ORTHO05D004587 1.7e-156 556.6 445 66.7
BcaC03g15859 Brassica carinata HOM05D003886 ORTHO05D004587 2.9e-156 555.8 451 66.7
BcaC08g45391 Brassica carinata HOM05D003886 ORTHO05D004587 2.9e-156 555.8 454 66.1
C06p30220 Brassica napus HOM05D003886 ORTHO05D004587 2.9e-156 555.8 454 66.1
BolC6t38185H Brassica oleracea HOM05D003886 ORTHO05D004587 2.9e-156 555.8 454 66.1
HPP92_015734 Vanilla planifolia HOM05D003886 ORTHO05D004587 3.8e-156 555.4 445 64.3
MBI14_g11787_MAGBIO Magnolia biondii HOM05D003886 ORTHO05D004587 8.5e-156 554.3 414 67.4
CARHR017150 Cardamine hirsuta HOM05D003886 ORTHO05D004587 5.5e-155 551.6 442 67.0
BraA02t07251Z Brassica rapa HOM05D003886 ORTHO05D004587 1.2e-154 550.4 446 66.1
Oeu010600.1 Olea europaea HOM05D003886 ORTHO05D004587 1.6e-154 550.1 451 64.3
BraA07t30377Z Brassica rapa HOM05D003886 ORTHO05D004587 3.6e-154 548.9 456 65.1
A07p27360 Brassica napus HOM05D003886 ORTHO05D004587 6.1e-154 548.1 448 65.6
Nitab4.5_0013482g0010 Nicotiana tabacum HOM05D003886 ORTHO05D004587 3.3e-152 542.3 453 63.8
AL1G28850 Arabidopsis lyrata HOM05D003886 ORTHO05D004587 4.4e-152 542.0 451 65.4
AT1G16690 Arabidopsis thaliana HOM05D003886 ORTHO05D004587 4.4e-152 542.0 440 66.1
Nitab4.5_0006794g0050 Nicotiana tabacum HOM05D003886 ORTHO05D004587 7.4e-152 541.2 451 64.1
DCAR_022329 Daucus carota HOM05D003886 ORTHO05D004587 1.7e-151 540.0 451 65.0
Sp1g14830 Schrenkiella parvula HOM05D003886 ORTHO05D004587 8.5e-148 527.7 458 64.0
unitig_699.g19834 Utricularia gibba HOM05D003886 ORTHO05D004587 1.5e-147 526.9 434 65.2
Lsat_1_v5_gn_3_52161 Lactuca sativa HOM05D003886 ORTHO05D004587 4.0e-145 518.8 421 66.0
Oeu061917.1 Olea europaea HOM05D003886 ORTHO05D004587 9.7e-144 514.2 507 55.2
Zm00001eb308950 Zea mays HOM05D003886 ORTHO05D004587 2.0e-141 506.5 458 60.7
CDE03G0037 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 1.3e-140 503.8 438 61.4
ATR0626G209 Amborella trichopoda HOM05D003886 ORTHO05D004587 6.5e-140 501.5 424 62.3
CDE02G1355 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 8.5e-140 501.1 426 59.4
Os08g0338900 Oryza sativa ssp. japonica HOM05D003886 ORTHO05D004587 9.4e-139 497.7 440 59.5
Lj5C312G11 Lonicera japonica HOM05D003886 ORTHO05D004587 4.0e-137 492.3 437 61.6
Aqoxy6G00358 Aquilegia oxysepala HOM05D003886 ORTHO05D004587 5.2e-137 491.9 436 61.2
SHI31130 Sapria himalayana HOM05D003886 ORTHO05D004587 5.0e-132 475.3 459 57.5
ECA246G0124 Erigeron canadensis HOM05D003886 ORTHO05D004587 5.2e-129 465.3 412 61.9
CDE06G2124 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 2.0e-125 453.4 391 61.1
Mapoly0014s0003 Marchantia polymorpha HOM05D003886 ORTHO05D004587 7.8e-125 451.4 457 53.4
arahy.Tifrunner.gnm1.ann1.78GTJP Arachis hypogaea HOM05D003886 ORTHO05D004587 1.0e-124 451.1 301 75.4
CDE05G0598 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 5.2e-121 438.7 429 52.9
SGA_v2.0_scaffold8G04472 Striga asiatica HOM05D003886 ORTHO05D004587 1.2e-120 437.6 511 52.4
AagrBONN_evm.TU.Sc2ySwM_228.1694 Anthoceros agrestis HOM05D003886 ORTHO05D004587 1.2e-117 427.6 451 53.2
Ciclev10021199m.g Citrus clementina HOM05D003886 ORTHO05D004587 1.1e-115 421.0 321 68.5
SMO367G1242 Selaginella moellendorffii HOM05D003886 ORTHO05D004587 9.8e-112 407.9 455 51.9
BolC2t09627H Brassica oleracea HOM05D003886 ORTHO05D004587 2.2e-111 406.8 339 65.2
ClCG03G018020 Citrullus lanatus HOM05D003886 ORTHO05D004587 4.6e-109 399.1 286 76.2
Pp3c23_7050 Physcomitrium patens HOM05D003886 ORTHO05D004587 3.4e-104 382.9 456 48.2
Nitab4.5_0000389g0130 Nicotiana tabacum HOM05D003886 ORTHO05D004587 1.4e-102 377.5 254 74.4
ECA228G0002 Erigeron canadensis HOM05D003886 ORTHO05D004587 6.2e-90 335.5 318 59.1
ATR0751G140 Amborella trichopoda HOM05D003886 ORTHO05D004587 9.3e-86 321.6 313 57.8
Pp3c16_8390 Physcomitrium patens HOM05D003886 ORTHO05D004587 2.3e-84 317.0 444 44.4
Cpa.g.sc10.20 Carica papaya HOM05D003886 ORTHO05D004587 1.5e-80 304.3 193 76.2
CBR_g38268 Chara braunii HOM05D003886 ORTHO05D004587 1.2e-77 294.7 303 54.1
Ah.14g084510 Amaranthus hybridus HOM05D003886 ORTHO05D004587 3.3e-75 286.6 511 39.9
Os09g0284600 Oryza sativa ssp. japonica HOM05D003886 ORTHO05D004587 9.0e-73 278.5 217 65.9
CARHR072690 Cardamine hirsuta HOM05D003886 ORTHO05D004587 6.5e-71 272.3 192 69.3
PGSC0003DMG400013092 Solanum tuberosum HOM05D003886 ORTHO05D004587 2.5e-70 270.4 192 69.3
Nn8g38501 Nelumbo nucifera HOM05D003886 ORTHO05D004587 9.0e-65 251.9 232 58.6
ClCG03G018040 Citrullus lanatus HOM05D003886 ORTHO05D004587 2.1e-61 240.7 128 92.2
HanXRQChr08g0234351 Helianthus annuus HOM05D003886 ORTHO05D004587 1.3e-60 238.0 153 79.1
Cpa.g.sc10.19 Carica papaya HOM05D003886 ORTHO05D004587 9.7e-59 231.9 185 68.6
CAN.G1586.1 Capsicum annuum HOM05D003886 ORTHO05D004587 8.2e-58 228.8 233 57.1
Haze_16249 Corylus avellana HOM05D003886 ORTHO05D004587 1.8e-57 227.6 261 52.1
SEGI_16863 Sequoiadendron giganteum HOM05D003886 ORTHO05D004587 4.6e-53 213.0 170 60.6
BcaB05g25167 Brassica carinata HOM05D003886 ORTHO05D004587 4.1e-49 199.9 120 80.0
ATR0751G177 Amborella trichopoda HOM05D003886 ORTHO05D004587 9.4e-46 188.7 130 70.8
Zm00001eb097400 Zea mays HOM05D003886 ORTHO05D004587 2.1e-45 187.6 214 50.9
MCO08G116 Micromonas commoda HOM05D003886 ORTHO05D004587 5.7e-43 179.5 316 37.7
SEGI_11104 Sequoiadendron giganteum HOM05D003886 ORTHO05D004587 1.3e-42 178.3 270 44.1
Cre03.g196400 Chlamydomonas reinhardtii HOM05D003886 ORTHO05D004587 3.7e-42 176.8 297 38.0
PRCOL_00004606 Prasinoderma coloniale HOM05D003886 ORTHO05D004587 2.9e-39 167.2 294 37.8
Haze_16250 Corylus avellana HOM05D003886 ORTHO05D004587 1.2e-32 145.2 101 69.3
Aqoxy6G02601 Aquilegia oxysepala HOM05D003886 ORTHO05D004587 2.6e-32 144.1 154 51.3
MBI11_g15900_MAGBIO Magnolia biondii HOM05D003886 ORTHO05D004587 1.2e-27 128.6 76 77.6
Nitab4.5_0000389g0110 Nicotiana tabacum HOM05D003886 ORTHO05D004587 5.7e-27 126.3 169 45.6
GSVIVG01024509001 Vitis vinifera HOM05D003886 ORTHO05D004587 2.2e-26 124.4 79 82.3
arahy.Tifrunner.gnm1.ann1.RANL81 Arachis hypogaea HOM05D003886 ORTHO05D004587 1.9e-22 111.3 154 47.4
arahy.Tifrunner.gnm1.ann1.6KK5MR Arachis hypogaea HOM05D003886 ORTHO05D004587 7.2e-22 109.4 121 56.2
BcaB05g25166 Brassica carinata HOM05D000912 ORTHO05D001232 2.8e-18 97.4 74 71.6
arahy.Tifrunner.gnm1.ann1.K7FQ1R Arachis hypogaea HOM05D003886 ORTHO05D019782 6.3e-18 96.3 108 54.6
arahy.Tifrunner.gnm1.ann1.F9GSXH Arachis hypogaea HOM05D003886 ORTHO05D019782 8.3e-18 95.9 125 48.0
ClCG03G018030 Citrullus lanatus HOM05D003886 ORTHO05D004587 2.1e-13 81.3 42 92.9
Lj5C312T17 Lonicera japonica HOM05D001538 ORTHO05D004587 3.6e-13 80.5 50 82.0
Gohir.A07G077000 Gossypium hirsutum HOM05D003886 ORTHO05D004587 5.2e-12 76.6 54 75.9
CAN.G1600.1 Capsicum annuum HOM05D003886 ORTHO05D004587 5.7e-11 73.2 52 73.1
SHI49864 Sapria himalayana HOM05D003886 ORTHO05D004587 7.5e-11 72.8 51 72.5
SHI26090 Sapria himalayana HOM05D005069 ORTHO05D006024 1.2e-08 65.5 63 52.4
TWI38G0197 Tripterygium wilfordii HOM05D002054 ORTHO05D005362 2.3e-07 61.2 148 31.1
Lsat_1_v5_gn_7_81560 Lactuca sativa HOM05D000267 ORTHO05D029881 3.9e-07 60.5 76 47.4
TWI63G1527 Tripterygium wilfordii HOM05D002054 ORTHO05D005362 1.1e-06 58.9 146 33.6
SHI44505 Sapria himalayana HOM05D003886 ORTHO05D009901 1.5e-06 58.5 36 72.2


User provided reference genes

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