Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0016181 Sechium edule HOM05D007233 ORTHO05D009043 6.2e-73 277.3 136 100.0
ClCG01G013980 Citrullus lanatus HOM05D007233 ORTHO05D009043 3.1e-64 248.4 136 89.0
MELO3C004843.2 Cucumis melo HOM05D007233 ORTHO05D009043 2.1e-57 225.7 134 82.1
CsaV3_1G014310 Cucumis sativus L. HOM05D007233 ORTHO05D009043 4.4e-55 218.0 134 79.1
COL.COLO4_31139 Corchorus olitorius HOM05D007233 ORTHO05D009043 5.1e-51 204.5 136 74.3
Thecc.09G294400 Theobroma cacao HOM05D007233 ORTHO05D009043 6.6e-51 204.1 134 75.4
Potri.004G190200 Populus trichocarpa HOM05D007233 ORTHO05D009043 1.3e-49 199.9 134 73.1
Manes.04G010800 Manihot esculenta HOM05D007233 ORTHO05D009043 2.1e-49 199.1 134 72.4
Sabra04G0127900 Salix brachista HOM05D007233 ORTHO05D009043 2.1e-49 199.1 134 70.9
Gohir.D13G228300 Gossypium hirsutum HOM05D007233 ORTHO05D009043 3.6e-49 198.4 134 73.1
Ciclev10030019m.g Citrus clementina HOM05D007233 ORTHO05D009043 3.1e-48 195.3 135 70.4
Carub.0001s0774 Capsella rubella HOM05D007233 ORTHO05D009043 4.0e-48 194.9 137 66.4
AT1G08390 Arabidopsis thaliana HOM05D007233 ORTHO05D009043 9.0e-48 193.7 138 66.7
Sp1g07040 Schrenkiella parvula HOM05D007233 ORTHO05D009043 1.2e-47 193.4 137 65.0
Lj3g0012043 Lotus japonicus HOM05D007233 ORTHO05D009043 1.5e-47 193.0 137 67.9
AL1G18800 Arabidopsis lyrata HOM05D007233 ORTHO05D009043 3.4e-47 191.8 137 65.7
Lalb_Chr03g0027851 Lupinus albus HOM05D007233 ORTHO05D009043 3.4e-47 191.8 137 67.2
BcaB07g34087 Brassica carinata HOM05D007233 ORTHO05D009043 5.8e-47 191.0 137 65.7
C05p06530 Brassica napus HOM05D007233 ORTHO05D009043 5.8e-47 191.0 137 65.7
BolC5t29413H Brassica oleracea HOM05D007233 ORTHO05D009043 5.8e-47 191.0 137 65.7
A06p05410 Brassica napus HOM05D007233 ORTHO05D009043 9.9e-47 190.3 137 65.0
BraA06t23750Z Brassica rapa HOM05D007233 ORTHO05D009043 9.9e-47 190.3 137 65.0
CiPaw.14G104900 Carya illinoinensis HOM05D007233 ORTHO05D009043 2.2e-46 189.1 141 67.4
VMungo1127G1048 Vigna mungo HOM05D007233 ORTHO05D009043 2.2e-46 189.1 136 66.9
PGR119G2223 Punica granatum HOM05D007233 ORTHO05D009043 2.9e-46 188.7 132 68.9
THA.LOC104826400 Tarenaya hassleriana HOM05D007233 ORTHO05D009043 2.9e-46 188.7 138 65.2
Prupe.6G116400 Prunus persica HOM05D007233 ORTHO05D009043 6.4e-46 187.6 132 68.2
CSS0019792 Camellia sinensis var. sinensis HOM05D007233 ORTHO05D009043 8.4e-46 187.2 137 67.2
Phvul.011G088600 Phaseolus vulgaris HOM05D007233 ORTHO05D009043 8.4e-46 187.2 136 65.4
GSVIVG01031420001 Vitis vinifera HOM05D007233 ORTHO05D009043 1.1e-45 186.8 134 64.2
TAR369G0714 Trochodendron aralioides HOM05D007233 ORTHO05D009043 1.9e-45 186.0 133 66.2
QL01p014111 Quercus lobata HOM05D007233 ORTHO05D009043 3.2e-45 185.3 129 65.9
Haze_23494 Corylus avellana HOM05D007233 ORTHO05D009043 4.2e-45 184.9 138 67.4
Thhalv10009077m.g Eutrema salsugineum HOM05D007233 ORTHO05D009043 5.4e-45 184.5 137 63.5
SalBow3G1176 Salvia bowleyana HOM05D007233 ORTHO05D009043 5.4e-45 184.5 138 64.5
TPR.G32017 Trifolium pratense HOM05D007233 ORTHO05D009043 5.4e-45 184.5 135 65.2
Aa31LG1G6480 Aethionema arabicum HOM05D007233 ORTHO05D009043 1.2e-44 183.3 140 62.1
Ca_10766_v3 Cicer arietinum L. HOM05D007233 ORTHO05D009043 1.6e-44 183.0 135 65.2
Gohir.A13G223500 Gossypium hirsutum HOM05D007233 ORTHO05D009043 1.6e-44 183.0 134 70.9
Medtr4g056300 Medicago truncatula HOM05D007233 ORTHO05D009043 2.7e-44 182.2 135 65.9
MSTRG.17742 Avicennia marina HOM05D007233 ORTHO05D009043 7.9e-44 180.6 138 63.8
Duzib170G0414 Durio zibethinus HOM05D007233 ORTHO05D009043 1.3e-43 179.9 134 68.7
CARHR008260 Cardamine hirsuta HOM05D007233 ORTHO05D009043 1.8e-43 179.5 140 60.7
ClCG08G000500 Citrullus lanatus HOM05D007233 ORTHO05D009043 5.1e-43 177.9 99 86.9
Aqoxy1G01014 Aquilegia oxysepala HOM05D007233 ORTHO05D009043 1.9e-42 176.0 133 63.9
Hund07722 Selenicereus undatus HOM05D007233 ORTHO05D009043 2.5e-42 175.6 134 62.7
EL10Ac9g21047 Beta vulgaris HOM05D007233 ORTHO05D009043 7.4e-42 174.1 139 60.4
FvH4_3g30010 Fragaria vesca HOM05D007233 ORTHO05D009043 1.3e-41 173.3 133 59.4
FAN25G1956 Fragaria x ananassa HOM05D007233 ORTHO05D009043 2.8e-41 172.2 133 58.6
Migut.N02527 Erythranthe guttata HOM05D007233 ORTHO05D009043 3.7e-41 171.8 138 62.3
CANSAT78G0435 Cannabis sativa HOM05D007233 ORTHO05D009043 6.2e-41 171.0 136 60.3
Rhsim13G0103700 Rhododendron simsii HOM05D007233 ORTHO05D009043 8.1e-41 170.6 129 67.4
SHI05395 Sapria himalayana HOM05D007233 ORTHO05D009043 8.1e-41 170.6 135 62.2
SGA_v2.0_scaffold93G28323 Striga asiatica HOM05D007233 ORTHO05D009043 8.1e-41 170.6 142 59.2
vmacro03232 Vaccinium macrocarpon HOM05D007233 ORTHO05D009043 8.1e-41 170.6 129 67.4
Glyma.11G190700 Glycine max HOM05D007233 ORTHO05D009043 1.1e-40 170.2 144 60.4
Lsat_1_v5_gn_1_61521 Lactuca sativa HOM05D007233 ORTHO05D009043 1.1e-40 170.2 138 61.6
unitig_699.g19183 Utricularia gibba HOM05D007233 ORTHO05D009043 1.8e-40 169.5 135 61.5
FAN21G0394 Fragaria x ananassa HOM05D007233 ORTHO05D009043 4.0e-40 168.3 133 57.9
RcHm_v2.0_Chr5g0055931 Rosa chinensis HOM05D007233 ORTHO05D009043 4.0e-40 168.3 133 59.4
HanXRQChr11g0345871 Helianthus annuus HOM05D007233 ORTHO05D009043 5.3e-40 167.9 136 61.0
Dinv29405 Davidia involucrata HOM05D007233 ORTHO05D009043 2.0e-39 166.0 169 53.3
ATR0665G357 Amborella trichopoda HOM05D007233 ORTHO05D009043 7.6e-39 164.1 129 62.0
arahy.Tifrunner.gnm1.ann1.5NF9YD Arachis hypogaea HOM05D007233 ORTHO05D009043 7.6e-39 164.1 156 57.1
Cc01_g10010 Coffea canephora HOM05D007233 ORTHO05D009043 1.3e-38 163.3 142 57.0
MD11G1153700 Malus domestica HOM05D007233 ORTHO05D009043 1.3e-38 163.3 132 61.4
Eucgr.F03331 Eucalyptus grandis HOM05D007233 ORTHO05D009043 1.7e-38 162.9 143 60.1
Solyc11g066690.2 Solanum lycopersicum HOM05D007233 ORTHO05D009043 6.4e-38 161.0 138 56.5
Sopen11g026420 Solanum pennellii HOM05D007233 ORTHO05D009043 6.4e-38 161.0 138 56.5
Peaxi162Scf00150g00710 Petunia axillaris HOM05D007233 ORTHO05D009043 8.4e-38 160.6 138 57.2
PGSC0003DMG400000464 Solanum tuberosum HOM05D007233 ORTHO05D009043 1.4e-37 159.8 138 56.5
AUR62031769 Chenopodium quinoa HOM05D007233 ORTHO05D009043 5.5e-37 157.9 142 54.2
DCAR_015489 Daucus carota HOM05D007233 ORTHO05D009043 2.1e-36 156.0 137 57.7
Nitab4.5_0000442g0180 Nicotiana tabacum HOM05D007233 ORTHO05D009043 1.0e-35 153.7 133 60.2
ECA248G0451 Erigeron canadensis HOM05D007233 ORTHO05D009043 2.3e-35 152.5 138 54.3
Ah.01g016160 Amaranthus hybridus HOM05D007233 ORTHO05D009043 6.7e-35 151.0 145 53.8
CAN.G644.46 Capsicum annuum HOM05D007233 ORTHO05D009043 6.7e-35 151.0 138 57.2
MBI04_g22192_MAGBIO Magnolia biondii HOM05D007233 ORTHO05D009043 9.6e-34 147.1 105 65.7
PSO063G0378 Papaver somniferum HOM05D007233 ORTHO05D009043 1.3e-33 146.7 133 56.4
PSO339G4613 Papaver somniferum HOM05D007233 ORTHO05D009043 1.6e-33 146.4 133 55.6
Atru.chr3.3421 Acer truncatum HOM05D007233 ORTHO05D009043 9.0e-32 140.6 96 66.7
Gorai.013G259000 Gossypium raimondii HOM05D007233 ORTHO05D009043 1.7e-30 136.3 111 64.9
Cpa.g.sc47.40 Carica papaya HOM05D007233 ORTHO05D009043 9.3e-29 130.6 115 59.1
Haze_23472 Corylus avellana HOM05D007233 ORTHO05D009043 1.9e-26 122.9 134 55.2
Cfa020420 Carpinus fangiana HOM05D007233 ORTHO05D009043 8.2e-25 117.5 95 64.2
Zm00001eb053200 Zea mays HOM05D007233 ORTHO05D009043 1.4e-24 116.7 142 46.5
Cfa010203 Carpinus fangiana HOM05D007233 ORTHO05D009043 1.2e-23 113.6 98 61.2
Os03g0684300 Oryza sativa ssp. japonica HOM05D007233 ORTHO05D009043 1.2e-23 113.6 140 46.4
Pp3c26_4940 Physcomitrium patens HOM05D007233 ORTHO05D009043 2.0e-23 112.8 137 43.8
Pp3c26_4950 Physcomitrium patens HOM05D007233 ORTHO05D009043 2.0e-23 112.8 137 43.8
TWI31G0123 Tripterygium wilfordii HOM05D007233 ORTHO05D009043 4.5e-23 111.7 118 49.2
Haze_23479 Corylus avellana HOM05D007233 ORTHO05D009043 1.3e-22 110.2 94 60.6
Mapoly0016s0182 Marchantia polymorpha HOM05D007233 ORTHO05D009043 2.2e-22 109.4 131 44.3
Nn6g35132 Nelumbo nucifera HOM05D007233 ORTHO05D009043 3.8e-22 108.6 82 59.8
Haze_23491 Corylus avellana HOM05D007233 ORTHO05D009043 6.5e-22 107.8 147 46.3
Psat0s3169g0040 Pisum sativum HOM05D007233 ORTHO05D009043 3.2e-21 105.5 101 57.4
arahy.Tifrunner.gnm1.ann1.9UEW9D Arachis hypogaea HOM05D007233 ORTHO05D009043 1.6e-20 103.2 122 48.4
AagrBONN_evm.TU.Sc2ySwM_344.3909 Anthoceros agrestis HOM05D007233 ORTHO05D009043 7.4e-18 94.4 116 38.8
Sc12g0003860 Simmondsia chinensis HOM05D007233 ORTHO05D009043 1.0e-14 84.0 77 54.5
Oeu035529.3 Olea europaea HOM05D007233 ORTHO05D009043 6.5e-14 81.3 79 54.4
Haze_23488 Corylus avellana HOM05D007233 ORTHO05D009043 8.5e-14 80.9 103 48.5
CDE02G1642 Ceratophyllum demersum HOM05D007233 ORTHO05D009043 1.9e-13 79.7 81 53.1
Duzib168G0428 Durio zibethinus HOM05D007233 ORTHO05D009043 2.5e-13 79.3 101 46.5
arahy.Tifrunner.gnm1.ann1.3ZRX2Z Arachis hypogaea HOM05D007233 ORTHO05D009043 9.7e-10 67.4 66 53.0
Potri.002G256001 Populus trichocarpa HOM05D007233 ORTHO05D009043 9.7e-10 67.4 129 40.3
Oeu000616.2 Olea europaea HOM05D007233 ORTHO05D009043 2.9e-06 55.8 88 38.6


User provided reference genes

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