Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0016087 Sechium edule HOM05D002665 ORTHO05D002991 8.8e-171 604.0 416 100.0
Sed0019725 Sechium edule HOM05D002665 ORTHO05D002991 5.9e-58 229.2 440 42.7
CsaV3_3G047330 Cucumis sativus L. HOM05D002665 ORTHO05D002991 8.0e-47 192.2 434 46.5
MELO3C003595.2 Cucumis melo HOM05D002665 ORTHO05D002991 1.4e-46 191.4 436 46.1
Sed0013595 Sechium edule HOM05D002665 ORTHO05D002991 4.5e-42 176.4 434 45.2
Dinv13248 Davidia involucrata HOM05D002665 ORTHO05D002991 1.4e-30 138.3 190 61.1
GSVIVG01035555001 Vitis vinifera HOM05D002665 ORTHO05D002991 3.0e-30 137.1 187 57.2
CSS0011343 Camellia sinensis var. sinensis HOM05D002665 ORTHO05D002991 6.8e-30 136.0 187 63.6
CSS0018914 Camellia sinensis var. sinensis HOM05D002665 ORTHO05D002991 6.8e-30 136.0 187 63.6
ClCG11G013940 Citrullus lanatus HOM05D002665 ORTHO05D002991 1.5e-29 134.8 430 41.6
TWI63G0924 Tripterygium wilfordii HOM05D002665 ORTHO05D002991 1.5e-29 134.8 188 56.4
Cfa013322 Carpinus fangiana HOM05D002665 ORTHO05D002991 7.5e-29 132.5 188 58.0
TWI34G1233 Tripterygium wilfordii HOM05D002665 ORTHO05D002991 7.5e-29 132.5 188 55.3
MSTRG.11823 Avicennia marina HOM05D002665 ORTHO05D002991 8.3e-28 129.0 187 57.8
MD08G1121400 Malus domestica HOM05D002665 ORTHO05D002991 8.3e-28 129.0 434 36.6
Eucgr.C02115 Eucalyptus grandis HOM05D002665 ORTHO05D002991 1.1e-27 128.6 201 56.2
Migut.A00460 Erythranthe guttata HOM05D002665 ORTHO05D002991 1.8e-27 127.9 199 57.8
Sabra18G0001800 Salix brachista HOM05D002665 ORTHO05D002991 1.8e-27 127.9 188 54.8
Potri.018G003700 Populus trichocarpa HOM05D002665 ORTHO05D002991 4.1e-27 126.7 187 55.1
SGA_v2.0_scaffold27G11647 Striga asiatica HOM05D002665 ORTHO05D002991 4.1e-27 126.7 190 56.3
COL.COLO4_18617 Corchorus olitorius HOM05D002665 ORTHO05D002991 9.2e-27 125.6 188 56.4
Thecc.09G004300 Theobroma cacao HOM05D002665 ORTHO05D002991 1.6e-26 124.8 436 37.4
Gorai.009G069200 Gossypium raimondii HOM05D002665 ORTHO05D002991 7.8e-26 122.5 442 37.6
Prupe.1G455000 Prunus persica HOM05D002665 ORTHO05D002991 7.8e-26 122.5 435 37.0
Peaxi162Scf00045g01455 Petunia axillaris HOM05D002665 ORTHO05D002991 3.9e-25 120.2 189 57.7
CAN.G195.4 Capsicum annuum HOM05D002665 ORTHO05D002991 5.0e-25 119.8 191 55.5
QL12p026047 Quercus lobata HOM05D002665 ORTHO05D002991 5.0e-25 119.8 440 35.0
Ca_15631_v3 Cicer arietinum L. HOM05D002665 ORTHO05D002991 8.6e-25 119.0 192 55.7
Gohir.A05G065951 Gossypium hirsutum HOM05D002665 ORTHO05D002991 8.6e-25 119.0 433 37.2
Solyc08g074290.3 Solanum lycopersicum HOM05D002665 ORTHO05D002991 8.6e-25 119.0 188 55.9
Lalb_Chr23g0269331 Lupinus albus HOM05D002665 ORTHO05D002991 1.1e-24 118.6 187 61.0
Potri.006G276900 Populus trichocarpa HOM05D002665 ORTHO05D002991 1.1e-24 118.6 187 46.5
Sopen08g022940 Solanum pennellii HOM05D002665 ORTHO05D002991 1.1e-24 118.6 188 55.9
Oeu026032.1 Olea europaea HOM05D002665 ORTHO05D002991 1.5e-24 118.2 192 51.6
arahy.Tifrunner.gnm1.ann1.D04E55 Arachis hypogaea HOM05D002665 ORTHO05D002991 1.9e-24 117.9 190 57.4
arahy.Tifrunner.gnm1.ann1.DQG69K Arachis hypogaea HOM05D002665 ORTHO05D002991 1.9e-24 117.9 190 57.9
VMungo1309G0855 Vigna mungo HOM05D002665 ORTHO05D002991 1.9e-24 117.9 183 57.9
CANSAT25G0789 Cannabis sativa HOM05D002665 ORTHO05D002991 2.5e-24 117.5 187 54.0
CiPaw.07G208800 Carya illinoinensis HOM05D002665 ORTHO05D002991 2.5e-24 117.5 199 55.8
EL10Ac2g03706 Beta vulgaris HOM05D002665 ORTHO05D002991 3.3e-24 117.1 190 54.2
Migut.E01410 Erythranthe guttata HOM05D002665 ORTHO05D002991 3.3e-24 117.1 191 51.3
HanXRQChr03g0082951 Helianthus annuus HOM05D002665 ORTHO05D002991 3.3e-24 117.1 190 57.9
CAN.G940.9 Capsicum annuum HOM05D002665 ORTHO05D002991 7.3e-24 115.9 197 54.8
Glyma.06G080100 Glycine max HOM05D002665 ORTHO05D002991 9.5e-24 115.5 180 61.1
PGR044G2224 Punica granatum HOM05D002665 ORTHO05D002991 9.5e-24 115.5 187 44.9
MSTRG.1740 Avicennia marina HOM05D002665 ORTHO05D002991 1.6e-23 114.8 193 48.7
Duzib168G2001 Durio zibethinus HOM05D002665 ORTHO05D002991 1.6e-23 114.8 187 54.5
Lsat_1_v5_gn_5_59921 Lactuca sativa HOM05D002665 ORTHO05D002991 2.8e-23 114.0 186 59.7
Medtr3g109330 Medicago truncatula HOM05D002665 ORTHO05D002991 2.8e-23 114.0 191 59.2
Nitab4.5_0006603g0020 Nicotiana tabacum HOM05D002665 ORTHO05D002991 2.8e-23 114.0 183 58.5
ECA240G1424 Erigeron canadensis HOM05D002665 ORTHO05D002991 4.7e-23 113.2 187 55.6
HanXRQChr17g0538701 Helianthus annuus HOM05D002665 ORTHO05D002991 4.7e-23 113.2 188 59.0
Nitab4.5_0000919g0110 Nicotiana tabacum HOM05D002665 ORTHO05D002991 4.7e-23 113.2 183 58.5
Peaxi162Scf00213g00118 Petunia axillaris HOM05D002665 ORTHO05D002991 6.2e-23 112.8 186 55.9
TAR383G0456 Trochodendron aralioides HOM05D002665 ORTHO05D002991 6.2e-23 112.8 432 37.7
CiPaw.08G022000 Carya illinoinensis HOM05D002665 ORTHO05D002991 8.0e-23 112.5 188 56.4
RcHm_v2.0_Chr6g0305521 Rosa chinensis HOM05D002665 ORTHO05D002991 8.0e-23 112.5 193 54.9
AUR62038745 Chenopodium quinoa HOM05D002665 ORTHO05D002991 1.4e-22 111.7 190 51.6
Gohir.D05G068300 Gossypium hirsutum HOM05D002665 ORTHO05D002991 1.4e-22 111.7 444 36.5
Dinv36353 Davidia involucrata HOM05D002665 ORTHO05D002991 2.3e-22 110.9 183 58.5
Hund03271 Selenicereus undatus HOM05D002665 ORTHO05D002991 2.3e-22 110.9 190 53.2
Manes.03G002000 Manihot esculenta HOM05D002665 ORTHO05D002991 3.1e-22 110.5 200 51.0
Lalb_Chr08g0243391 Lupinus albus HOM05D002665 ORTHO05D002991 5.2e-22 109.8 187 58.8
Sc09g0007840 Simmondsia chinensis HOM05D002665 ORTHO05D002991 5.2e-22 109.8 191 50.8
TPR.G1355 Trifolium pratense HOM05D002665 ORTHO05D002991 6.8e-22 109.4 190 50.5
Lalb_Chr11g0064281 Lupinus albus HOM05D002665 ORTHO05D002991 8.9e-22 109.0 190 57.4
TAR383G0485 Trochodendron aralioides HOM05D002665 ORTHO05D002991 8.9e-22 109.0 398 30.7
Aqoxy7G02750 Aquilegia oxysepala HOM05D002665 ORTHO05D002991 1.2e-21 108.6 187 48.7
Lsat_1_v5_gn_3_24601 Lactuca sativa HOM05D002665 ORTHO05D002991 1.5e-21 108.2 189 56.6
MBI13_g31541_MAGBIO Magnolia biondii HOM05D002665 ORTHO05D002991 4.4e-21 106.7 190 53.7
MD15G1100200 Malus domestica HOM05D002665 ORTHO05D002991 5.8e-21 106.3 432 35.4
Lj1g0017245 Lotus japonicus HOM05D002665 ORTHO05D002991 7.5e-21 105.9 183 61.2
MD15G1100300 Malus domestica HOM05D002665 ORTHO05D002991 7.5e-21 105.9 183 37.7
Ciclev10008249m.g Citrus clementina HOM05D002665 ORTHO05D002991 9.8e-21 105.5 198 51.5
Phvul.009G104300 Phaseolus vulgaris HOM05D002665 ORTHO05D002991 1.3e-20 105.1 188 55.9
DCAR_000689 Daucus carota HOM05D002665 ORTHO05D002991 2.9e-20 104.0 186 53.8
ECA246G1443 Erigeron canadensis HOM05D002665 ORTHO05D002991 3.7e-20 103.6 187 51.9
TAR625G0782 Trochodendron aralioides HOM05D002665 ORTHO05D002991 4.9e-20 103.2 191 52.9
unitig_747.g21906 Utricularia gibba HOM05D002665 ORTHO05D002991 4.9e-20 103.2 186 54.8
Os09g0497700 Oryza sativa ssp. japonica HOM05D002665 ORTHO05D002991 8.3e-20 102.4 186 50.0
Aa31LG7G11370 Aethionema arabicum HOM05D002665 ORTHO05D002991 2.4e-19 100.9 199 46.2
TWI32G0516 Tripterygium wilfordii HOM05D002665 ORTHO05D002991 3.2e-19 100.5 186 59.1
SGA_v2.0_scaffold193G40649 Striga asiatica HOM05D002665 ORTHO05D002991 4.1e-19 100.1 157 59.2
CSS0015738 Camellia sinensis var. sinensis HOM05D002665 ORTHO05D002991 5.4e-19 99.8 189 51.9
Haze_21811 Corylus avellana HOM05D002665 ORTHO05D002991 2.0e-18 97.8 357 34.5
Oeu002014.1 Olea europaea HOM05D002665 ORTHO05D002991 2.0e-18 97.8 447 32.4
SGA_v2.0_scaffold169G38589 Striga asiatica HOM05D000033 ORTHO05D001317 2.7e-18 97.4 188 48.9
Sc06g0001220 Simmondsia chinensis HOM05D002665 ORTHO05D002991 3.5e-18 97.1 189 50.8
PGSC0003DMG400014854 Solanum tuberosum HOM05D002665 ORTHO05D002991 3.5e-18 97.1 202 50.5
Cc00_g12740 Coffea canephora HOM05D002665 ORTHO05D002991 4.6e-18 96.7 197 49.7
HanXRQChr13g0411771 Helianthus annuus HOM05D002665 ORTHO05D002991 4.6e-18 96.7 182 54.9
Sabra06G0214600 Salix brachista HOM05D002665 ORTHO05D002991 2.3e-17 94.4 161 52.8
Zm00001eb035730 Zea mays HOM05D002665 ORTHO05D002991 3.0e-17 94.0 188 46.3
ATR0626G381 Amborella trichopoda HOM05D002665 ORTHO05D002991 3.9e-17 93.6 187 51.3
FvH4_2g36360 Fragaria vesca HOM05D002665 ORTHO05D002991 3.9e-17 93.6 433 33.9
Hma1.2p1_0891F.1_g233110 Hydrangea macrophylla HOM05D002665 ORTHO05D002991 6.6e-17 92.8 188 52.1
HPP92_004710 Vanilla planifolia HOM05D002665 ORTHO05D002991 6.6e-17 92.8 190 53.2
AL4G14850 Arabidopsis lyrata HOM05D002665 ORTHO05D002991 1.5e-16 91.7 188 46.3
AUR62020636 Chenopodium quinoa HOM05D002665 ORTHO05D002991 2.5e-16 90.9 167 52.1
Nn2g12753 Nelumbo nucifera HOM05D002665 ORTHO05D002991 5.6e-16 89.7 436 31.4
Sopen08g002000 Solanum pennellii HOM05D002665 ORTHO05D002991 5.6e-16 89.7 202 49.5
Os08g0519400 Oryza sativa ssp. japonica HOM05D002665 ORTHO05D002991 7.3e-16 89.4 189 49.2
Carub.0007s0922 Capsella rubella HOM05D002665 ORTHO05D002991 9.5e-16 89.0 188 48.9
BcaC07g40934 Brassica carinata HOM05D002665 ORTHO05D002991 1.2e-15 88.6 177 42.4
FAN27G0789 Fragaria x ananassa HOM05D002665 ORTHO05D002991 1.2e-15 88.6 438 30.8
AT2G24420 Arabidopsis thaliana HOM05D002665 ORTHO05D002991 1.6e-15 88.2 187 45.5
PSO170G0184 Papaver somniferum HOM05D002665 ORTHO05D002991 1.6e-15 88.2 442 35.5
Solyc08g006030.4 Solanum lycopersicum HOM05D002665 ORTHO05D002991 2.1e-15 87.8 202 49.0
A03p60640 Brassica napus HOM05D002665 ORTHO05D002991 2.8e-15 87.4 185 49.2
C07p58550 Brassica napus HOM05D002665 ORTHO05D002991 2.8e-15 87.4 186 48.9
BolC7t46310H Brassica oleracea HOM05D002665 ORTHO05D002991 2.8e-15 87.4 186 48.9
ClCG08G012460 Citrullus lanatus HOM05D002665 ORTHO05D002991 2.8e-15 87.4 431 30.2
BcaC09g51913 Brassica carinata HOM05D002665 ORTHO05D002991 3.6e-15 87.0 199 44.2
CsaV3_2G031150 Cucumis sativus L. HOM05D002665 ORTHO05D002991 4.7e-15 86.7 431 29.9
A01p06970 Brassica napus HOM05D002665 ORTHO05D002991 6.2e-15 86.3 199 44.7
C08p39280 Brassica napus HOM05D002665 ORTHO05D002991 6.2e-15 86.3 177 42.9
BraA01t00645Z Brassica rapa HOM05D002665 ORTHO05D002991 6.2e-15 86.3 199 44.7
FAN15G1304 Fragaria x ananassa HOM05D002665 ORTHO05D002991 6.2e-15 86.3 433 30.7
Nn8g40895 Nelumbo nucifera HOM05D002665 ORTHO05D002991 6.2e-15 86.3 185 47.0
BolC8t51501H Brassica oleracea HOM05D002665 ORTHO05D002991 8.1e-15 85.9 177 42.9
AL7G20740 Arabidopsis lyrata HOM05D002665 ORTHO05D002991 1.4e-14 85.1 186 50.5
PSO144G0166 Papaver somniferum HOM05D002665 ORTHO05D002991 1.4e-14 85.1 435 36.1
SalBow8G3867 Salvia bowleyana HOM05D002665 ORTHO05D002991 1.4e-14 85.1 182 46.2
BraA03t15106Z Brassica rapa HOM05D002665 ORTHO05D002991 1.8e-14 84.7 185 48.6
A09p56320 Brassica napus HOM05D002665 ORTHO05D002991 3.1e-14 84.0 177 48.0
BcaNung05320 Brassica carinata HOM05D002665 ORTHO05D002991 5.2e-14 83.2 199 44.2
Thhalv10025225m.g Eutrema salsugineum HOM05D002665 ORTHO05D002991 5.2e-14 83.2 441 31.1
THA.LOC104803883 Tarenaya hassleriana HOM05D002665 ORTHO05D002991 5.2e-14 83.2 187 43.3
THA.LOC104819928 Tarenaya hassleriana HOM05D002665 ORTHO05D002991 6.8e-14 82.8 186 46.2
vmacro20828 Vaccinium macrocarpon HOM05D002665 ORTHO05D002991 6.8e-14 82.8 236 41.5
Dinv26437 Davidia involucrata HOM05D002665 ORTHO05D002991 8.9e-14 82.4 189 49.7
BcaNung01529 Brassica carinata HOM05D002665 ORTHO05D002684 1.2e-13 82.0 185 48.1
Sp4g03440 Schrenkiella parvula HOM05D002665 ORTHO05D002991 1.5e-13 81.6 188 44.7
Aa31LG2G19020 Aethionema arabicum HOM05D002665 ORTHO05D002991 2.6e-13 80.9 198 49.0
Ah.11g044010 Amaranthus hybridus HOM05D002665 ORTHO05D002991 7.5e-13 79.3 186 47.3
Cc06_g21730 Coffea canephora HOM05D002665 ORTHO05D002991 7.5e-13 79.3 185 43.2
DCAR_019798 Daucus carota HOM05D002665 ORTHO05D002991 9.9e-13 79.0 184 37.0
BcaC02g08457 Brassica carinata HOM05D002665 ORTHO05D002991 1.3e-12 78.6 188 43.1
DCAR_004551 Daucus carota HOM05D002665 ORTHO05D002991 1.7e-12 78.2 193 35.8
Lj8C424T3 Lonicera japonica HOM05D002665 ORTHO05D002991 1.7e-12 78.2 68 55.9
Lj8C430T1 Lonicera japonica HOM05D002665 ORTHO05D002991 1.7e-12 78.2 68 55.9
Sp7g29200 Schrenkiella parvula HOM05D002665 ORTHO05D002991 1.7e-12 78.2 186 45.2
Atru.chr7.2676 Acer truncatum HOM05D002665 ORTHO05D002991 2.2e-12 77.8 206 48.1
BolC1t00751H Brassica oleracea HOM05D002665 ORTHO05D002991 2.9e-12 77.4 440 32.0
Lsat_1_v5_gn_7_55401 Lactuca sativa HOM05D002665 ORTHO05D002991 4.9e-12 76.6 192 43.8
Nitab4.5_0000860g0180 Nicotiana tabacum HOM05D002665 ORTHO05D002991 4.9e-12 76.6 185 48.6
Thhalv10000173m.g Eutrema salsugineum HOM05D002665 ORTHO05D002991 6.4e-12 76.3 179 44.1
Hund19391 Selenicereus undatus HOM05D002665 ORTHO05D002991 6.4e-12 76.3 72 51.4
Oeu059295.1 Olea europaea HOM05D002665 ORTHO05D002991 1.1e-11 75.5 135 53.3
Actinidia22249 Actinidia chinensis HOM05D002665 ORTHO05D002991 1.9e-11 74.7 133 58.6
Carub.0004s0377 Capsella rubella HOM05D002665 ORTHO05D002991 1.9e-11 74.7 200 40.0
TAR626G1487 Trochodendron aralioides HOM05D002665 ORTHO05D002991 1.9e-11 74.7 414 37.9
THA.LOC104803590 Tarenaya hassleriana HOM05D002665 ORTHO05D002991 3.2e-11 73.9 187 46.0
BolC4t26954H Brassica oleracea HOM05D002665 ORTHO05D002991 4.1e-11 73.6 188 42.6
THA.LOC104814666 Tarenaya hassleriana HOM05D002665 ORTHO05D002991 4.1e-11 73.6 186 26.3
Manes.16G136900 Manihot esculenta HOM05D002665 ORTHO05D002991 7.1e-11 72.8 191 29.3
Solyc05g010750.3 Solanum lycopersicum HOM05D002665 ORTHO05D002991 7.1e-11 72.8 68 54.4
BraA04t17483Z Brassica rapa HOM05D002665 ORTHO05D002991 2.1e-10 71.2 177 46.3
A04p18730 Brassica napus HOM05D002665 ORTHO05D002991 2.7e-10 70.9 176 44.9
C04p54020 Brassica napus HOM05D002665 ORTHO05D002991 7.8e-10 69.3 176 44.9
Lj7A750G48 Lonicera japonica HOM05D002665 ORTHO05D002991 7.8e-10 69.3 190 45.3
Peaxi162Scf00324g00228 Petunia axillaris HOM05D002665 ORTHO05D002991 7.8e-10 69.3 186 48.9
CARHR117640 Cardamine hirsuta HOM05D002665 ORTHO05D002991 1.3e-09 68.6 177 42.9
MBI16_g34881_MAGBIO Magnolia biondii HOM05D002665 ORTHO05D002991 1.3e-09 68.6 305 27.9
Psat5g023040 Pisum sativum HOM05D002665 ORTHO05D002991 1.7e-09 68.2 199 35.7
Prupe.1G078300 Prunus persica HOM05D002665 ORTHO05D002991 1.7e-09 68.2 186 44.1
Zm00001eb174670 Zea mays HOM05D002665 ORTHO05D002991 1.7e-09 68.2 207 42.5
C01p07700 Brassica napus HOM05D002665 ORTHO05D002991 6.6e-09 66.2 443 31.6
MELO3C011165.2 Cucumis melo HOM05D002665 ORTHO05D002991 8.6e-09 65.9 177 40.1
Sopen07g004920 Solanum pennellii HOM05D002665 ORTHO05D002991 8.6e-09 65.9 187 47.6
Nitab4.5_0012989g0010 Nicotiana tabacum HOM05D002665 ORTHO05D002991 1.9e-08 64.7 174 49.4
Solyc07g008970.4 Solanum lycopersicum HOM05D002665 ORTHO05D002991 3.3e-08 63.9 186 46.2
Nitab4.5_0004459g0010 Nicotiana tabacum HOM05D002665 ORTHO05D002991 9.5e-08 62.4 186 45.7
PGSC0003DMG400028754 Solanum tuberosum HOM05D002665 ORTHO05D002991 9.5e-08 62.4 187 45.5
BcaC02g08462 Brassica carinata HOM05D002665 ORTHO05D002991 1.2e-07 62.0 166 45.2
Cpa.g.sc328.1 Carica papaya HOM05D002665 ORTHO05D002991 1.2e-07 62.0 68 51.5
Zm00001eb102150 Zea mays HOM05D002665 ORTHO05D002991 1.6e-07 61.6 190 42.6
Hma1.2p1_0891F.1_g233120 Hydrangea macrophylla HOM05D002665 ORTHO05D002991 4.7e-07 60.1 68 42.6
Nitab4.5_0001392g0090 Nicotiana tabacum HOM05D002665 ORTHO05D002991 4.7e-07 60.1 186 38.2
HanXRQChr17g0537281 Helianthus annuus HOM05D002665 ORTHO05D002991 6.2e-07 59.7 213 35.2
Actinidia01290 Actinidia chinensis HOM05D002665 ORTHO05D002991 8.1e-07 59.3 72 44.4
AT4G31340 Arabidopsis thaliana HOM05D002665 ORTHO05D002991 4.0e-06 57.0 87 41.4
FAN20G2144 Fragaria x ananassa HOM05D002665 ORTHO05D002991 4.0e-06 57.0 75 44.0
CDE06G0091 Ceratophyllum demersum HOM05D002665 ORTHO05D002991 5.2e-06 56.6 152 41.4


User provided reference genes

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