Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 1.6e-197 692.6 351 100.0
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 4.8e-170 601.3 363 85.1
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 4.2e-166 588.2 338 86.7
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 1.1e-153 547.0 302 89.4
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 1.8e-140 503.1 324 75.0
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 4.0e-140 501.9 321 76.0
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 4.4e-139 498.4 319 75.9
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 7.5e-139 497.7 326 75.8
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 9.8e-139 497.3 334 74.0
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 4.9e-138 495.0 326 75.2
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 8.3e-138 494.2 315 76.2
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 8.3e-138 494.2 315 76.2
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 3.2e-137 492.3 326 75.2
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 3.2e-137 492.3 313 76.7
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 4.1e-137 491.9 334 72.8
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 4.1e-137 491.9 335 72.8
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 5.4e-137 491.5 335 72.2
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 5.4e-137 491.5 314 76.1
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 5.9e-136 488.0 321 73.8
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 1.7e-135 486.5 337 71.5
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 1.7e-135 486.5 319 74.3
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 1.7e-135 486.5 316 75.6
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 6.6e-135 484.6 339 70.8
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.1e-134 483.8 315 74.9
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 4.7e-133 478.4 315 73.7
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 6.1e-133 478.0 318 74.5
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 1.4e-132 476.9 311 75.2
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 1.4e-132 476.9 311 74.9
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 1.8e-132 476.5 311 75.2
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 1.8e-132 476.5 332 71.1
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 2.3e-132 476.1 311 75.2
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 2.3e-132 476.1 315 74.0
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 1.5e-131 473.4 311 74.3
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 3.4e-131 472.2 311 74.3
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 3.4e-131 472.2 321 71.3
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 5.8e-131 471.5 339 69.0
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 7.5e-131 471.1 330 70.3
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 7.5e-131 471.1 313 74.4
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 9.8e-131 470.7 315 73.0
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 2.2e-130 469.5 312 75.0
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 2.9e-130 469.2 312 74.7
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 2.9e-130 469.2 312 74.7
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 2.9e-130 469.2 315 73.0
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 3.7e-130 468.8 312 72.8
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 4.9e-130 468.4 317 73.8
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 8.3e-130 467.6 312 72.8
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 1.9e-129 466.5 311 72.7
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 9.2e-129 464.2 330 69.1
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 9.2e-129 464.2 315 73.0
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 7.8e-128 461.1 315 72.1
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 3.3e-126 455.7 320 70.3
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 4.3e-126 455.3 338 69.2
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 7.3e-126 454.5 314 71.3
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 1.6e-125 453.4 323 67.8
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 1.4e-124 450.3 348 66.7
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 1.8e-124 449.9 323 67.8
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 6.8e-124 448.0 324 67.9
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 1.2e-123 447.2 319 69.0
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 1.5e-123 446.8 310 68.1
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 1.5e-123 446.8 328 68.3
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 2.2e-122 443.0 310 67.1
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 8.3e-122 441.0 318 69.5
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 4.6e-120 435.3 311 67.5
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 2.3e-119 433.0 348 63.8
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 7.3e-118 427.9 316 65.8
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 9.5e-118 427.6 326 63.5
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 2.8e-117 426.0 321 66.4
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 2.8e-117 426.0 321 66.0
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 3.6e-117 425.6 270 77.8
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 6.2e-117 424.9 326 63.5
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 1.4e-116 423.7 312 67.0
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 2.3e-116 422.9 316 64.9
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 2.3e-116 422.9 340 62.1
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 6.8e-116 421.4 298 70.8
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 6.8e-116 421.4 313 67.4
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 8.9e-116 421.0 326 62.6
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 1.2e-115 420.6 313 64.9
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 3.4e-115 419.1 318 64.8
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 1.7e-114 416.8 313 64.5
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 4.1e-113 412.1 273 75.1
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 1.2e-112 410.6 324 63.3
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 1.0e-111 407.5 276 74.3
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 1.6e-104 383.6 319 59.6
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 1.3e-103 380.6 251 72.9
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 4.0e-100 369.0 334 57.5
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 9.0e-100 367.9 248 72.6
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 2.2e-98 363.2 251 73.3
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 3.2e-97 359.4 320 59.1
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 1.0e-95 354.4 311 58.8
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 1.3e-95 354.0 306 54.9
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 4.0e-92 342.4 286 57.7
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 2.1e-85 320.1 347 46.1
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 2.4e-84 316.6 331 47.7
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 1.7e-82 310.5 310 49.0
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 1.7e-82 310.5 310 49.0
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 1.4e-81 307.4 316 51.9
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 7.1e-81 305.1 259 57.9
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 6.0e-80 302.0 340 43.5
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 1.3e-79 300.8 236 65.7
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.9e-78 297.0 312 46.2
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 9.6e-78 294.7 306 47.4
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 3.7e-77 292.7 318 46.9
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.4e-76 290.0 306 45.8
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.3e-74 284.3 306 46.1
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 1.0e-71 274.6 329 45.0
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 6.9e-68 261.9 321 46.7
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 5.0e-66 255.8 314 44.9
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 2.2e-53 213.8 213 49.8
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 7.7e-35 152.1 136 60.3
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 9.8e-30 135.2 118 59.3
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 1.6e-27 127.9 109 56.9
vmacro02767 Vaccinium macrocarpon HOM05D063291 ORTHO05D009028 2.0e-06 57.8 39 66.7


User provided reference genes

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