Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0016005 Sechium edule HOM05D000211 ORTHO05D002682 7.4e-55 216.9 102 100.0
ClCG00G001860 Citrullus lanatus HOM05D000211 ORTHO05D002682 5.6e-10 67.8 36 83.3
ClCG02G002230 Citrullus lanatus HOM05D000211 ORTHO05D002682 5.6e-10 67.8 36 83.3
Sed0019986 Sechium edule HOM05D000211 ORTHO05D002682 5.6e-10 67.8 36 83.3
CsaV3_7G003280 Cucumis sativus L. HOM05D000211 ORTHO05D002682 2.1e-09 65.9 36 80.6
Manes.13G139800 Manihot esculenta HOM05D000211 ORTHO05D002682 3.1e-08 62.0 36 75.0
Sopen10g003970 Solanum pennellii HOM05D000211 ORTHO05D002682 6.8e-08 60.8 36 69.4
Solyc10g008100.3 Solanum lycopersicum HOM05D000211 ORTHO05D002682 1.2e-07 60.1 35 71.4
PGSC0003DMG400010561 Solanum tuberosum HOM05D000211 ORTHO05D002682 1.2e-07 60.1 35 71.4
FvH4_6g26960 Fragaria vesca HOM05D000211 ORTHO05D002682 1.5e-07 59.7 36 72.2
FAN02G3414 Fragaria x ananassa HOM05D000211 ORTHO05D002682 1.5e-07 59.7 36 72.2
FAN05G3686 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.5e-07 59.7 36 72.2
FAN09G0909 Fragaria x ananassa HOM05D000211 ORTHO05D002682 1.5e-07 59.7 36 72.2
FAN14G1312 Fragaria x ananassa HOM05D000211 ORTHO05D002682 1.5e-07 59.7 36 72.2
Cfa014689 Carpinus fangiana HOM05D000211 ORTHO05D002682 2.0e-07 59.3 36 72.2
ECA234G0464 Erigeron canadensis HOM05D000211 ORTHO05D002682 2.6e-07 58.9 35 74.3
Hund00955 Selenicereus undatus HOM05D000211 ORTHO05D002682 2.6e-07 58.9 36 72.2
AUR62024073 Chenopodium quinoa HOM05D007320 ORTHO05D009290 3.4e-07 58.5 35 74.3
CiPaw.03G183700 Carya illinoinensis HOM05D000211 ORTHO05D002682 4.4e-07 58.2 36 69.4
Atru.chr6.2841 Acer truncatum HOM05D000211 ORTHO05D002682 5.8e-07 57.8 36 66.7
Aa31LG1G24260 Aethionema arabicum HOM05D000211 ORTHO05D002682 5.8e-07 57.8 36 66.7
EL10Ac8g19625 Beta vulgaris HOM05D000211 ORTHO05D002682 5.8e-07 57.8 36 69.4
CAN.G782.13 Capsicum annuum HOM05D000211 ORTHO05D002682 5.8e-07 57.8 35 71.4
Eucgr.K01083 Eucalyptus grandis HOM05D000211 ORTHO05D002682 5.8e-07 57.8 36 66.7
Prupe.3G125900 Prunus persica HOM05D000211 ORTHO05D002682 5.8e-07 57.8 36 69.4
PGR142G1556 Punica granatum HOM05D000211 ORTHO05D002682 5.8e-07 57.8 36 69.4
RcHm_v2.0_Chr2g0128801 Rosa chinensis HOM05D000211 ORTHO05D002682 5.8e-07 57.8 36 69.4
HanXRQChr17g0565291 Helianthus annuus HOM05D000211 ORTHO05D002682 7.5e-07 57.4 35 71.4
Lsat_1_v5_gn_4_28361 Lactuca sativa HOM05D000211 ORTHO05D002682 7.5e-07 57.4 35 71.4
Potri.013G124000 Populus trichocarpa HOM05D000211 ORTHO05D002682 7.5e-07 57.4 36 66.7
AT2G42390 Arabidopsis thaliana HOM05D000211 ORTHO05D002682 9.8e-07 57.0 36 66.7
PSO210G5077 Papaver somniferum HOM05D000211 ORTHO05D002682 9.8e-07 57.0 36 66.7
CANSAT01G1146 Cannabis sativa HOM05D000211 ORTHO05D002682 1.3e-06 56.6 36 63.9
Medtr4g079430 Medicago truncatula HOM05D000211 ORTHO05D002682 1.3e-06 56.6 36 66.7
PSO832G1085 Papaver somniferum HOM05D000211 ORTHO05D002682 1.3e-06 56.6 36 63.9
MSTRG.15116 Avicennia marina HOM05D000211 ORTHO05D002682 1.7e-06 56.2 36 66.7
Gohir.A12G090700 Gossypium hirsutum HOM05D000211 ORTHO05D002682 1.7e-06 56.2 45 55.6
Gohir.D12G087900 Gossypium hirsutum HOM05D000211 ORTHO05D002682 1.7e-06 56.2 45 55.6
Gorai.008G097900 Gossypium raimondii HOM05D000211 ORTHO05D002682 1.7e-06 56.2 45 55.6
Ca_18790_v3 Cicer arietinum L. HOM05D000211 ORTHO05D002682 2.2e-06 55.8 36 63.9
MD02G1242400 Malus domestica HOM05D000211 ORTHO05D002682 2.2e-06 55.8 36 66.7
TWI14G0084 Tripterygium wilfordii HOM05D000211 ORTHO05D002682 2.2e-06 55.8 36 66.7
AL409U10010 Arabidopsis lyrata HOM05D000211 ORTHO05D002682 2.9e-06 55.5 36 63.9
AL4G40810 Arabidopsis lyrata HOM05D000211 ORTHO05D002682 2.9e-06 55.5 36 63.9
Peaxi162Scf00241g01212 Petunia axillaris HOM05D000211 ORTHO05D002682 2.9e-06 55.5 35 68.6
Thecc.01G240600 Theobroma cacao HOM05D000211 ORTHO05D002682 2.9e-06 55.5 36 63.9
Cpa.g.sc209.5 Carica papaya HOM05D000211 ORTHO05D002682 3.7e-06 55.1 45 55.6
Nitab4.5_0002645g0050 Nicotiana tabacum HOM05D000211 ORTHO05D002682 3.7e-06 55.1 35 65.7
Oeu031085.1 Olea europaea HOM05D000211 ORTHO05D002682 3.7e-06 55.1 36 66.7
Potri.019G092100 Populus trichocarpa HOM05D000211 ORTHO05D002682 3.7e-06 55.1 36 63.9
arahy.Tifrunner.gnm1.ann1.45LUS5 Arachis hypogaea HOM05D000211 ORTHO05D002682 4.9e-06 54.7 36 63.9
A05p02930 Brassica napus HOM05D000211 ORTHO05D002682 4.9e-06 54.7 36 63.9
C04p03560 Brassica napus HOM05D000211 ORTHO05D002682 4.9e-06 54.7 36 63.9
BolC4t21991H Brassica oleracea HOM05D000211 ORTHO05D002682 4.9e-06 54.7 36 63.9
BraA05t19284Z Brassica rapa HOM05D000211 ORTHO05D002682 4.9e-06 54.7 36 63.9
Ciclev10016674m.g Citrus clementina HOM05D000211 ORTHO05D002682 4.9e-06 54.7 36 63.9
Migut.M00194 Erythranthe guttata HOM05D000211 ORTHO05D002682 4.9e-06 54.7 36 63.9
Lalb_Chr05g0219841 Lupinus albus HOM05D000211 ORTHO05D002682 4.9e-06 54.7 36 63.9
Sp4g24540 Schrenkiella parvula HOM05D000211 ORTHO05D002682 4.9e-06 54.7 36 63.9
Carub.0004s2479 Capsella rubella HOM05D000211 ORTHO05D002682 6.4e-06 54.3 34 67.6
CARHR137440 Cardamine hirsuta HOM05D000211 ORTHO05D002682 6.4e-06 54.3 36 63.9
Glyma.06G285000 Glycine max HOM05D000211 ORTHO05D002682 6.4e-06 54.3 36 63.9
Glyma.12G120800 Glycine max HOM05D000211 ORTHO05D002682 6.4e-06 54.3 36 63.9
Lj4g0015151 Lotus japonicus HOM05D000211 ORTHO05D002682 6.4e-06 54.3 34 67.6
Mapoly0057s0106 Marchantia polymorpha HOM05D000211 ORTHO05D002682 6.4e-06 54.3 45 51.1
Medtr4g083360 Medicago truncatula HOM05D000211 ORTHO05D002682 6.4e-06 54.3 35 65.7
Psat7g166680 Pisum sativum HOM05D000211 ORTHO05D002682 6.4e-06 54.3 36 63.9
THA.LOC104802850 Tarenaya hassleriana HOM05D000211 ORTHO05D002682 6.4e-06 54.3 36 63.9
THA.LOC104813476 Tarenaya hassleriana HOM05D000211 ORTHO05D002682 6.4e-06 54.3 36 63.9
TWI23G0737 Tripterygium wilfordii HOM05D000211 ORTHO05D002682 6.4e-06 54.3 36 63.9
Aqoxy1G02228 Aquilegia oxysepala HOM05D000211 ORTHO05D002682 8.3e-06 53.9 36 63.9
arahy.Tifrunner.gnm1.ann1.GTVL13 Arachis hypogaea HOM05D000211 ORTHO05D002682 8.3e-06 53.9 36 63.9
ECA233G3904 Erigeron canadensis HOM05D000211 ORTHO05D002682 8.3e-06 53.9 36 63.9
Nn1g06351 Nelumbo nucifera HOM05D000211 ORTHO05D002682 8.3e-06 53.9 34 67.6
PSO339G3993 Papaver somniferum HOM05D000211 ORTHO05D002682 8.3e-06 53.9 36 61.1
Phvul.011G116600 Phaseolus vulgaris HOM05D000211 ORTHO05D002682 8.3e-06 53.9 36 63.9
PGR102G3379 Punica granatum HOM05D000211 ORTHO05D002682 8.3e-06 53.9 36 63.9
Rhsim04G0072500 Rhododendron simsii HOM05D000211 ORTHO05D002682 8.3e-06 53.9 36 61.1


User provided reference genes

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