Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015987 Sechium edule HOM05D008157 ORTHO05D009575 1.9e-119 432.6 222 100.0
ClCG05G003990 Citrullus lanatus HOM05D008157 ORTHO05D009575 7.0e-74 281.2 221 72.9
MELO3C006376.2 Cucumis melo HOM05D008157 ORTHO05D009575 3.4e-68 262.3 223 68.2
CsaV3_3G011680 Cucumis sativus L. HOM05D008157 ORTHO05D009575 1.6e-65 253.4 223 68.2
Manes.15G045800 Manihot esculenta HOM05D008157 ORTHO05D009575 2.2e-27 126.7 170 46.5
Potri.010G065666 Populus trichocarpa HOM05D008157 ORTHO05D009575 1.2e-25 120.9 168 44.0
Manes.03G158800 Manihot esculenta HOM05D008157 ORTHO05D009575 3.9e-24 115.9 172 43.0
Potri.008G172000 Populus trichocarpa HOM05D008157 ORTHO05D009575 1.9e-23 113.6 170 41.8
Sabra10G0041500 Salix brachista HOM05D008157 ORTHO05D009575 9.6e-23 111.3 165 43.0
QL06p021011 Quercus lobata HOM05D008157 ORTHO05D009575 1.6e-22 110.5 185 41.6
Prupe.1G048400 Prunus persica HOM05D008157 ORTHO05D009575 1.1e-21 107.8 163 41.7
Sabra08G0131300 Salix brachista HOM05D008157 ORTHO05D009575 1.1e-21 107.8 202 40.6
Haze_11459 Corylus avellana HOM05D008157 ORTHO05D009575 1.8e-21 107.1 209 38.8
CiPaw.02G106900 Carya illinoinensis HOM05D008157 ORTHO05D009575 7.6e-20 101.7 189 43.4
FvH4_4g04630 Fragaria vesca HOM05D008157 ORTHO05D009575 3.8e-19 99.4 192 36.5
FAN12G3964 Fragaria x ananassa HOM05D008157 ORTHO05D009575 6.4e-19 98.6 192 35.9
Thecc.04G264100 Theobroma cacao HOM05D008157 ORTHO05D009575 1.4e-18 97.4 177 39.5
Gohir.D02G048700 Gossypium hirsutum HOM05D008157 ORTHO05D009575 5.4e-18 95.5 185 39.5
Dinv27113 Davidia involucrata HOM05D008157 ORTHO05D009575 7.1e-18 95.1 197 36.0
TWI09G0993 Tripterygium wilfordii HOM05D008157 ORTHO05D009575 7.1e-18 95.1 179 36.9
Atru.chr4.1914 Acer truncatum HOM05D008157 ORTHO05D009575 9.3e-18 94.7 149 41.6
Gohir.A02G043000 Gossypium hirsutum HOM05D008157 ORTHO05D009575 1.2e-17 94.4 174 40.2
TAR365G0204 Trochodendron aralioides HOM05D008157 ORTHO05D009575 1.2e-17 94.4 187 41.7
CANSAT78G1852 Cannabis sativa HOM05D008157 ORTHO05D009575 2.1e-17 93.6 207 33.8
Peaxi162Scf00153g01844 Petunia axillaris HOM05D008157 ORTHO05D009575 2.7e-17 93.2 171 40.4
Duzib151G0689 Durio zibethinus HOM05D008157 ORTHO05D009575 2.3e-16 90.1 152 40.1
PGR004G0105 Punica granatum HOM05D008157 ORTHO05D009575 1.5e-15 87.4 145 42.1
MD16G1226400 Malus domestica HOM05D008157 ORTHO05D009575 1.9e-15 87.0 168 36.3
Rhsim02G0043800 Rhododendron simsii HOM05D008157 ORTHO05D009575 3.3e-15 86.3 190 36.8
MBI10_g35435_MAGBIO Magnolia biondii HOM05D008157 ORTHO05D009575 1.3e-14 84.3 174 38.5
Nn1g02959 Nelumbo nucifera HOM05D008157 ORTHO05D009575 1.3e-14 84.3 173 38.2
CSS0033147 Camellia sinensis var. sinensis HOM05D008157 ORTHO05D009575 3.6e-14 82.8 144 39.6
Lj5g0023776 Lotus japonicus HOM05D012468 ORTHO05D009575 1.1e-13 81.3 207 37.7
VMungo1215G2213 Vigna mungo HOM05D012468 ORTHO05D009575 1.1e-13 81.3 177 34.5
Glyma.20G200000 Glycine max HOM05D012468 ORTHO05D009575 5.3e-13 79.0 185 36.2
EL10Ac3g06669 Beta vulgaris HOM05D008157 ORTHO05D009575 6.9e-13 78.6 162 34.0
Cc03_g06320 Coffea canephora HOM05D008157 ORTHO05D009575 9.0e-13 78.2 169 35.5
Cc09_g08530 Coffea canephora HOM05D008157 ORTHO05D009575 9.0e-13 78.2 169 35.5
RcHm_v2.0_Chr4g0395401 Rosa chinensis HOM05D008157 ORTHO05D009575 2.0e-12 77.0 117 40.2
PSO832G3861 Papaver somniferum HOM05D008157 ORTHO05D009575 9.9e-12 74.7 124 46.0
TAR633G2472 Trochodendron aralioides HOM05D008157 ORTHO05D009575 9.9e-12 74.7 79 50.6
PSO764G0012 Papaver somniferum HOM05D008157 ORTHO05D009575 1.7e-11 73.9 147 42.2
Aqoxy5G00149 Aquilegia oxysepala HOM05D000655 ORTHO05D001635 2.2e-11 73.6 118 41.5
DCAR_030762 Daucus carota HOM05D008157 ORTHO05D009575 2.2e-11 73.6 91 42.9
Thecc.01G251000 Theobroma cacao HOM05D014916 ORTHO05D009575 3.8e-11 72.8 142 35.2
Phvul.011G133515 Phaseolus vulgaris HOM05D012468 ORTHO05D009575 1.4e-10 70.9 178 34.3
VMungo0720G2187 Vigna mungo HOM05D012468 ORTHO05D009575 1.4e-10 70.9 174 34.5
SalBow2G3016 Salvia bowleyana HOM05D008157 ORTHO05D009575 1.9e-10 70.5 179 34.1
Duzib138G0893 Durio zibethinus HOM05D014916 ORTHO05D009575 3.2e-10 69.7 124 41.1
GSVIVG01028417001 Vitis vinifera HOM05D008157 ORTHO05D009575 7.1e-10 68.6 207 30.0
Medtr1g073260 Medicago truncatula HOM05D012468 ORTHO05D009575 1.2e-09 67.8 88 48.9
Lsat_1_v5_gn_6_66080 Lactuca sativa HOM05D008157 ORTHO05D035152 2.1e-09 67.0 166 35.5
FAN17G2184 Fragaria x ananassa HOM05D008157 ORTHO05D009575 6.0e-09 65.5 114 36.8
Hma1.2p1_0112F.1_g054760 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 1.0e-08 64.7 124 37.9
Nitab4.5_0007351g0030 Nicotiana tabacum HOM05D008157 ORTHO05D009575 1.3e-08 64.3 118 39.0
SGA_v2.0_scaffold67G22685 Striga asiatica HOM05D008157 ORTHO05D009575 1.3e-08 64.3 113 40.7
MSTRG.4173 Avicennia marina HOM05D008157 ORTHO05D009575 1.8e-08 63.9 142 33.1
GSVIVG01027916001 Vitis vinifera HOM05D008157 ORTHO05D009575 6.7e-08 62.0 59 55.9
arahy.Tifrunner.gnm1.ann1.U79AWX Arachis hypogaea HOM05D012468 ORTHO05D009575 8.7e-08 61.6 197 27.4
Nitab4.5_0000194g0130 Nicotiana tabacum HOM05D008157 ORTHO05D009575 4.3e-07 59.3 114 36.8
Solyc09g090710.3 Solanum lycopersicum HOM05D008157 ORTHO05D009575 4.3e-07 59.3 109 36.7
arahy.Tifrunner.gnm1.ann1.JW933S Arachis hypogaea HOM05D012468 ORTHO05D009575 5.6e-07 58.9 202 29.2
Manes.12G036500 Manihot esculenta HOM05D014916 ORTHO05D009575 7.4e-07 58.5 147 32.0
Psat6g131320 Pisum sativum HOM05D012468 ORTHO05D009575 1.3e-06 57.8 85 42.4
Nitab4.5_0000194g0190 Nicotiana tabacum HOM05D008157 ORTHO05D009575 1.6e-06 57.4 118 37.3
Hma1.2p1_0273F.1_g109240 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 2.1e-06 57.0 139 33.8
Hund20495 Selenicereus undatus HOM05D008157 ORTHO05D009575 4.8e-06 55.8 225 28.4
Hma1.2p1_1702F.1_g298280 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 8.1e-06 55.1 137 33.6
Prupe.8G216000 Prunus persica HOM05D017729 ORTHO05D022643 8.1e-06 55.1 138 35.5


User provided reference genes

Program Settings