Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015939 Sechium edule HOM05D005795 ORTHO05D007200 5.6e-165 584.3 325 100.0
ClCG07G015610 Citrullus lanatus HOM05D005795 ORTHO05D007200 6.5e-137 491.1 325 87.7
MELO3C017720.2 Cucumis melo HOM05D005795 ORTHO05D007200 2.3e-134 482.6 326 85.3
CsaV3_4G003310 Cucumis sativus L. HOM05D005795 ORTHO05D007200 5.7e-133 478.0 326 84.7
Ciclev10021008m.g Citrus clementina HOM05D005795 ORTHO05D007200 5.2e-110 401.7 318 71.7
Dinv44196 Davidia involucrata HOM05D005795 ORTHO05D007200 5.7e-109 398.3 325 71.4
Duzib212G0505 Durio zibethinus HOM05D005795 ORTHO05D007200 1.7e-108 396.7 323 71.5
Sabra07G0103500 Salix brachista HOM05D005795 ORTHO05D007200 2.8e-108 396.0 318 70.1
Manes.04G041300 Manihot esculenta HOM05D005795 ORTHO05D007200 1.4e-107 393.7 330 70.6
Thecc.04G314000 Theobroma cacao HOM05D005795 ORTHO05D007200 2.4e-107 392.9 323 71.2
Cfa015145 Carpinus fangiana HOM05D005795 ORTHO05D007200 3.1e-107 392.5 320 73.4
arahy.Tifrunner.gnm1.ann1.LQCR4Y Arachis hypogaea HOM05D005795 ORTHO05D007200 1.6e-106 390.2 316 69.0
CANSAT78G1297 Cannabis sativa HOM05D005795 ORTHO05D007200 5.9e-106 388.3 318 67.0
Rhsim02G0076300 Rhododendron simsii HOM05D005795 ORTHO05D007200 7.7e-106 387.9 317 66.2
CiPaw.01G101200 Carya illinoinensis HOM05D005795 ORTHO05D007200 1.0e-105 387.5 318 70.1
COL.COLO4_21665 Corchorus olitorius HOM05D005795 ORTHO05D007200 1.0e-105 387.5 324 71.0
Haze_01529 Corylus avellana HOM05D005795 ORTHO05D007200 1.5e-104 383.6 320 71.2
Actinidia35971 Actinidia chinensis HOM05D005795 ORTHO05D007200 1.9e-104 383.3 320 69.4
RcHm_v2.0_Chr4g0407031 Rosa chinensis HOM05D005795 ORTHO05D007200 4.3e-104 382.1 316 70.3
CSS0047301 Camellia sinensis var. sinensis HOM05D005795 ORTHO05D007200 1.6e-103 380.2 317 69.7
Lalb_Chr22g0352181 Lupinus albus HOM05D005795 ORTHO05D007200 3.6e-103 379.0 319 69.0
TWI38G2022 Tripterygium wilfordii HOM05D005795 ORTHO05D007200 8.0e-103 377.9 320 68.8
Actinidia11305 Actinidia chinensis HOM05D005795 ORTHO05D007200 1.8e-102 376.7 318 69.5
FAN07G0438 Fragaria x ananassa HOM05D005795 ORTHO05D007200 1.2e-101 374.0 316 69.0
THA.LOC104803670 Tarenaya hassleriana HOM05D005795 ORTHO05D007200 9.8e-101 370.9 320 68.8
FvH4_4g10680 Fragaria vesca HOM05D005795 ORTHO05D007200 1.7e-100 370.2 316 68.7
Medtr2g098650 Medicago truncatula HOM05D005795 ORTHO05D007200 2.4e-99 366.3 324 65.1
Ca_01264_v3 Cicer arietinum L. HOM05D005795 ORTHO05D007200 3.2e-99 365.9 325 66.2
Glyma.13G343600 Glycine max HOM05D005795 ORTHO05D007200 4.1e-99 365.5 351 59.0
C01p27420 Brassica napus HOM05D005795 ORTHO05D007200 9.2e-99 364.4 323 68.1
VMungo1080G0355 Vigna mungo HOM05D005795 ORTHO05D007200 9.2e-99 364.4 329 64.1
Gohir.D05G287100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 1.6e-98 363.6 322 67.1
Glyma.15G030700 Glycine max HOM05D005795 ORTHO05D007200 2.7e-98 362.8 329 64.7
QL10p048508 Quercus lobata HOM05D005795 ORTHO05D007200 2.7e-98 362.8 318 67.9
Gorai.009G302100 Gossypium raimondii HOM05D005795 ORTHO05D007200 3.9e-97 359.0 322 66.5
Gohir.A05G286100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 8.6e-97 357.8 322 66.1
HPP92_013540 Vanilla planifolia HOM05D005795 ORTHO05D007200 1.1e-96 357.5 318 61.6
CARHR169760 Cardamine hirsuta HOM05D005795 ORTHO05D007200 9.5e-96 354.4 323 65.0
Cc08_g05980 Coffea canephora HOM05D005795 ORTHO05D007200 1.2e-95 354.0 322 64.6
Thhalv10025709m.g Eutrema salsugineum HOM05D005795 ORTHO05D007200 2.8e-95 352.8 323 65.6
Peaxi162Scf00375g00059 Petunia axillaris HOM05D005795 ORTHO05D007200 2.8e-95 352.8 317 66.2
Nn1g09576 Nelumbo nucifera HOM05D005795 ORTHO05D007200 4.7e-95 352.1 323 66.6
Lj3g0002937 Lotus japonicus HOM05D005795 ORTHO05D007200 3.1e-94 349.4 317 64.7
Aa31LG10G13730 Aethionema arabicum HOM05D005795 ORTHO05D007200 4.0e-94 349.0 318 67.3
PSO675G7496 Papaver somniferum HOM05D005795 ORTHO05D007200 4.0e-94 349.0 327 64.5
Cpa.g.sc41.30 Carica papaya HOM05D005795 ORTHO05D007200 6.8e-94 348.2 318 65.7
Atru.chr3.1532 Acer truncatum HOM05D005795 ORTHO05D007200 1.5e-93 347.1 324 64.2
Atru.chr3.1535 Acer truncatum HOM05D005795 ORTHO05D007200 1.5e-93 347.1 324 64.2
Potri.007G127500 Populus trichocarpa HOM05D005795 ORTHO05D007200 1.5e-93 347.1 318 64.5
GSVIVG01010747001 Vitis vinifera HOM05D005795 ORTHO05D007200 2.0e-93 346.7 323 66.6
AL5G41280 Arabidopsis lyrata HOM05D005795 ORTHO05D007200 2.6e-93 346.3 323 64.4
AT3G59380 Arabidopsis thaliana HOM05D005795 ORTHO05D007200 4.4e-93 345.5 323 63.8
PGR083G1909 Punica granatum HOM05D005795 ORTHO05D007200 4.4e-93 345.5 320 64.7
HanXRQChr07g0186111 Helianthus annuus HOM05D005795 ORTHO05D007200 5.8e-93 345.1 321 60.4
ECA233G5655 Erigeron canadensis HOM05D005795 ORTHO05D007200 7.5e-93 344.7 315 62.9
Lsat_1_v5_gn_6_55280 Lactuca sativa HOM05D005795 ORTHO05D007200 9.8e-93 344.4 346 56.6
PSO732G0188 Papaver somniferum HOM05D005795 ORTHO05D007200 2.9e-92 342.8 327 63.6
Carub.0005s2612 Capsella rubella HOM05D005795 ORTHO05D007200 3.7e-92 342.4 323 63.8
TPR.G18871 Trifolium pratense HOM05D005795 ORTHO05D007200 1.6e-90 337.0 324 61.7
Cc05_g13970 Coffea canephora HOM05D005795 ORTHO05D007200 6.0e-90 335.1 322 62.4
Lsat_1_v5_gn_9_14160 Lactuca sativa HOM05D005795 ORTHO05D007200 7.8e-90 334.7 346 55.2
Os09g0514400 Oryza sativa ssp. japonica HOM05D005795 ORTHO05D007200 7.8e-90 334.7 324 62.0
Lj6A56T30 Lonicera japonica HOM05D005795 ORTHO05D007200 3.0e-89 332.8 314 65.3
EL10Ac3g05921 Beta vulgaris HOM05D005795 ORTHO05D007200 3.9e-89 332.4 323 60.4
Prupe.1G191500 Prunus persica HOM05D005795 ORTHO05D007200 5.0e-89 332.0 319 63.3
SalBow3G4461 Salvia bowleyana HOM05D005795 ORTHO05D007200 5.0e-89 332.0 317 62.1
vmacro15646 Vaccinium macrocarpon HOM05D005795 ORTHO05D007200 6.6e-89 331.6 332 51.5
Hund03150 Selenicereus undatus HOM05D005795 ORTHO05D007200 5.6e-88 328.6 318 60.4
SGA_v2.0_scaffold375G50253 Striga asiatica HOM05D005795 ORTHO05D007200 5.6e-88 328.6 318 61.9
MSTRG.9769 Avicennia marina HOM05D005795 ORTHO05D007200 7.3e-88 328.2 317 62.5
DCAR_003909 Daucus carota HOM05D005795 ORTHO05D007200 6.2e-87 325.1 323 58.8
SGA_v2.0_scaffold136G34981 Striga asiatica HOM05D005795 ORTHO05D007200 1.1e-86 324.3 318 61.6
AUR62015400 Chenopodium quinoa HOM05D005795 ORTHO05D007200 1.8e-86 323.6 326 59.2
Eucgr.A00077 Eucalyptus grandis HOM05D005795 ORTHO05D007200 2.3e-86 323.2 318 61.3
Zm00001eb102710 Zea mays HOM05D005795 ORTHO05D007200 1.2e-85 320.9 313 62.6
Phvul.005G152400 Phaseolus vulgaris HOM05D005795 ORTHO05D007200 2.6e-85 319.7 329 58.4
BcaC09g50250 Brassica carinata HOM05D005795 ORTHO05D007200 4.4e-85 318.9 286 68.9
AUR62002291 Chenopodium quinoa HOM05D005795 ORTHO05D007200 4.4e-85 318.9 326 59.5
MD04G1007300 Malus domestica HOM05D005795 ORTHO05D007200 5.8e-85 318.5 317 61.5
ATR0743G276 Amborella trichopoda HOM05D005795 ORTHO05D007200 1.2e-82 310.8 323 60.1
Sp7g13790 Schrenkiella parvula HOM05D005795 ORTHO05D007200 3.5e-82 309.3 319 59.6
Aqoxy2G04090 Aquilegia oxysepala HOM05D005795 ORTHO05D007200 6.0e-82 308.5 317 59.6
Sopen06g029770 Solanum pennellii HOM05D005795 ORTHO05D007200 1.0e-81 307.8 314 61.8
Solyc06g073390.3 Solanum lycopersicum HOM05D005795 ORTHO05D007200 2.3e-81 306.6 314 61.5
A01p22030 Brassica napus HOM05D005795 ORTHO05D007200 3.0e-81 306.2 323 61.0
BraA01t02109Z Brassica rapa HOM05D005795 ORTHO05D007200 3.0e-81 306.2 323 61.0
PGSC0003DMG400027009 Solanum tuberosum HOM05D005795 ORTHO05D007200 5.1e-81 305.4 314 61.5
Ah.13g072920 Amaranthus hybridus HOM05D005795 ORTHO05D007200 1.9e-80 303.5 323 51.4
BcaNung00265 Brassica carinata HOM05D005795 ORTHO05D007200 2.5e-80 303.1 323 60.7
unitig_22.g5744 Utricularia gibba HOM05D005795 ORTHO05D007200 3.6e-79 299.3 324 56.5
Migut.G00958 Erythranthe guttata HOM05D005795 ORTHO05D007200 1.9e-75 287.0 317 56.8
CAN.G65.180 Capsicum annuum HOM05D005795 ORTHO05D007200 3.4e-69 266.2 281 62.6
Nitab4.5_0003132g0100 Nicotiana tabacum HOM05D005795 ORTHO05D007200 4.4e-69 265.8 333 43.8
FAN12G2789 Fragaria x ananassa HOM05D005795 ORTHO05D007200 9.9e-69 264.6 204 62.3
Pp3c9_24240 Physcomitrium patens HOM05D005795 ORTHO05D007200 2.9e-68 263.1 310 55.5
FAN12G0695 Fragaria x ananassa HOM05D005795 ORTHO05D007200 3.2e-67 259.6 204 61.8
CDE08G0443 Ceratophyllum demersum HOM05D005795 ORTHO05D007200 2.1e-66 256.9 323 52.0
TAR633G0878 Trochodendron aralioides HOM05D005795 ORTHO05D007200 5.6e-64 248.8 206 60.2
Hma1.2p1_0754F.1_g213060 Hydrangea macrophylla HOM05D005795 ORTHO05D007200 6.2e-63 245.4 165 67.9
Psat1g007200 Pisum sativum HOM05D005795 ORTHO05D007200 9.0e-62 241.5 207 56.5
SMO137G0277 Selaginella moellendorffii HOM05D005795 ORTHO05D007200 1.3e-60 237.7 320 50.6
BcaC06g33415 Brassica carinata HOM05D005795 ORTHO05D007200 1.4e-59 234.2 318 45.9
Eucgr.A00272 Eucalyptus grandis HOM05D005795 ORTHO05D007200 2.4e-59 233.4 207 56.5
Eucgr.A00076 Eucalyptus grandis HOM05D005795 ORTHO05D007200 3.5e-58 229.6 209 55.5
Mapoly0093s0047 Marchantia polymorpha HOM05D005795 ORTHO05D007200 1.0e-57 228.0 318 49.4
SHI30236 Sapria himalayana HOM05D005795 ORTHO05D007200 8.7e-57 224.9 256 48.8
Cc05_g03950 Coffea canephora HOM05D005795 ORTHO05D007200 6.9e-54 215.3 166 62.7
Nitab4.5_0005570g0030 Nicotiana tabacum HOM05D005795 ORTHO05D007200 9.0e-54 214.9 165 61.2
Oeu035829.1 Olea europaea HOM05D005795 ORTHO05D007200 3.2e-51 206.5 229 46.3
Sc03g0006720 Simmondsia chinensis HOM05D005795 ORTHO05D007200 9.6e-48 194.9 206 48.1
BolC1t02678H Brassica oleracea HOM05D005795 ORTHO05D000108 2.1e-47 193.7 165 61.8
FAN17G0508 Fragaria x ananassa HOM05D005795 ORTHO05D007200 4.5e-45 186.0 187 49.7
BcaC06g32941 Brassica carinata HOM05D005795 ORTHO05D007200 9.3e-43 178.3 205 47.3
AagrBONN_evm.TU.Sc2ySwM_228.2319 Anthoceros agrestis HOM05D005795 ORTHO05D007200 8.7e-33 145.2 210 52.9
MCO13G170 Micromonas commoda HOM05D005795 ORTHO05D007200 1.5e-32 144.4 249 34.1
CBR_g21757 Chara braunii HOM05D005795 ORTHO05D007200 1.8e-30 137.5 336 36.9
Duzib151G0649 Durio zibethinus HOM05D005795 ORTHO05D007200 4.5e-29 132.9 103 62.1
Eucgr.L02278 Eucalyptus grandis HOM05D005795 ORTHO05D007200 2.7e-26 123.6 101 55.4
Cre01.g016950 Chlamydomonas reinhardtii HOM05D005795 ORTHO05D007200 2.0e-24 117.5 253 43.1
AagrBONN_evm.TU.Sc2ySwM_117.2773 Anthoceros agrestis HOM05D005795 ORTHO05D007200 4.4e-24 116.3 168 37.5
Haze_01530 Corylus avellana HOM05D005795 ORTHO05D007200 2.8e-23 113.6 72 70.8
TAR633G0840 Trochodendron aralioides HOM05D005795 ORTHO05D007200 6.3e-23 112.5 74 68.9
SHI30240 Sapria himalayana HOM05D005795 ORTHO05D007200 1.5e-21 107.8 69 68.1
Cpa.g.sc41.23 Carica papaya HOM05D005795 ORTHO05D007200 1.3e-20 104.8 92 53.3
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 1.7e-20 104.4 347 27.7
A05p02150 Brassica napus HOM05D005795 ORTHO05D007200 5.7e-16 89.4 65 61.5
Cpa.g.sc41.24 Carica papaya HOM05D005795 ORTHO05D007200 9.7e-16 88.6 124 41.1
PSO648G0124 Papaver somniferum HOM05D005795 ORTHO05D007200 2.9e-12 77.0 47 70.2
Gohir.A10G135766 Gossypium hirsutum HOM05D005795 ORTHO05D007200 9.4e-11 72.0 58 58.6
SGA_v2.0_scaffold28G11802 Striga asiatica HOM05D005795 ORTHO05D007200 2.7e-10 70.5 186 26.9
PRCOL_00002257 Prasinoderma coloniale HOM05D005795 ORTHO05D007200 5.2e-09 66.2 302 29.8
PSO063G4587 Papaver somniferum HOM05D005795 ORTHO05D007200 1.4e-06 58.2 26 84.6


User provided reference genes

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