Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015935 Sechium edule HOM05D004233 ORTHO05D003507 2.2e-45 185.7 123 100.0
ClCG04G007170 Citrullus lanatus HOM05D004233 ORTHO05D003507 3.1e-31 138.7 116 66.4
MELO3C003231.2 Cucumis melo HOM05D004233 ORTHO05D003507 1.5e-30 136.3 118 65.3
CsaV3_4G026060 Cucumis sativus L. HOM05D004233 ORTHO05D003507 1.5e-30 136.3 119 68.1
Cpa.g.sc163.4 Carica papaya HOM05D004233 ORTHO05D003507 1.5e-14 83.2 120 41.7
Ciclev10013109m.g Citrus clementina HOM05D004233 ORTHO05D003507 1.0e-13 80.5 124 41.9
MSTRG.10228 Avicennia marina HOM05D004233 ORTHO05D003507 2.9e-13 79.0 117 41.9
Hma1.2p1_0763F.1_g214800 Hydrangea macrophylla HOM05D004233 ORTHO05D003507 2.9e-13 79.0 126 42.9
Manes.09G103100 Manihot esculenta HOM05D004233 ORTHO05D003507 8.5e-13 77.4 122 44.3
CiPaw.09G207200 Carya illinoinensis HOM05D004233 ORTHO05D003507 1.9e-12 76.3 122 43.4
Dinv37074 Davidia involucrata HOM05D004233 ORTHO05D003507 1.9e-12 76.3 97 46.4
Thecc.05G020400 Theobroma cacao HOM05D004233 ORTHO05D003507 2.5e-12 75.9 127 38.6
Eucgr.K02995 Eucalyptus grandis HOM05D004233 ORTHO05D003507 4.2e-12 75.1 122 44.3
QL07p036016 Quercus lobata HOM05D004233 ORTHO05D003507 4.2e-12 75.1 124 41.9
Gohir.A09G163800 Gossypium hirsutum HOM05D004233 ORTHO05D003507 9.4e-12 73.9 124 40.3
Cfa017246 Carpinus fangiana HOM05D004233 ORTHO05D003507 1.2e-11 73.6 125 40.0
Gohir.D09G159300 Gossypium hirsutum HOM05D004233 ORTHO05D003507 1.2e-11 73.6 124 40.3
Gorai.006G181000 Gossypium raimondii HOM05D004233 ORTHO05D003507 1.2e-11 73.6 124 40.3
Potri.016G112700 Populus trichocarpa HOM05D004233 ORTHO05D003507 1.2e-11 73.6 124 38.7
Medtr2g013470 Medicago truncatula HOM05D004233 ORTHO05D003507 3.6e-11 72.0 129 38.8
Duzib106G0630 Durio zibethinus HOM05D004233 ORTHO05D003507 7.9e-11 70.9 128 39.1
COL.COLO4_14571 Corchorus olitorius HOM05D004233 ORTHO05D003507 3.0e-10 68.9 127 36.2
Duzib128G0556 Durio zibethinus HOM05D004233 ORTHO05D003507 3.9e-10 68.6 126 38.9
Glyma.03G078400 Glycine max HOM05D004233 ORTHO05D003507 3.9e-10 68.6 94 43.6
MBI06_g42853_MAGBIO Magnolia biondii HOM05D004233 ORTHO05D003507 5.1e-10 68.2 122 41.0
Sabra16G0108400 Salix brachista HOM05D004233 ORTHO05D003507 6.7e-10 67.8 99 41.4
Duzib093G0978 Durio zibethinus HOM05D004233 ORTHO05D003507 1.1e-09 67.0 126 38.1
Potri.006G097700 Populus trichocarpa HOM05D004233 ORTHO05D003507 1.1e-09 67.0 124 37.9
Phvul.010G005000 Phaseolus vulgaris HOM05D004233 ORTHO05D003507 1.5e-09 66.6 94 44.7
Glyma.01G113100 Glycine max HOM05D004233 ORTHO05D003507 2.0e-09 66.2 106 39.6
ClCG10G021920 Citrullus lanatus HOM05D004233 ORTHO05D003507 2.6e-09 65.9 118 38.1
Lsat_1_v5_gn_9_35941 Lactuca sativa HOM05D004233 ORTHO05D003507 2.6e-09 65.9 126 39.7
Rhsim04G0131700 Rhododendron simsii HOM05D004233 ORTHO05D003507 2.6e-09 65.9 127 38.6
Sed0021305 Sechium edule HOM05D004233 ORTHO05D003507 5.7e-09 64.7 116 36.2
Sabra06G0075200 Salix brachista HOM05D004233 ORTHO05D003507 7.4e-09 64.3 123 36.6
Atru.chr8.2208 Acer truncatum HOM05D004233 ORTHO05D003507 9.7e-09 63.9 93 44.1
DCAR_018722 Daucus carota HOM05D004233 ORTHO05D003507 1.3e-08 63.5 127 40.2
Glyma.13G239800 Glycine max HOM05D004233 ORTHO05D003507 1.3e-08 63.5 122 36.9
Glyma.15G073400 Glycine max HOM05D004233 ORTHO05D003507 1.3e-08 63.5 122 37.7
MBI05_g30571_MAGBIO Magnolia biondii HOM05D004233 ORTHO05D003507 2.2e-08 62.8 115 37.4
arahy.Tifrunner.gnm1.ann1.BL7XQ3 Arachis hypogaea HOM05D004233 ORTHO05D003507 4.8e-08 61.6 116 42.2
MELO3C009185.2 Cucumis melo HOM05D004233 ORTHO05D003507 6.3e-08 61.2 119 37.8
Nn2g13635 Nelumbo nucifera HOM05D004233 ORTHO05D003507 6.3e-08 61.2 121 36.4
VMungo0331G0885 Vigna mungo HOM05D004233 ORTHO05D003507 6.3e-08 61.2 96 38.5
Migut.L01999 Erythranthe guttata HOM05D004233 ORTHO05D003507 1.8e-07 59.7 125 35.2
Oeu055173.1 Olea europaea HOM05D004233 ORTHO05D003507 1.8e-07 59.7 93 38.7
TAR623G0525 Trochodendron aralioides HOM05D004233 ORTHO05D003507 1.8e-07 59.7 126 37.3
Phvul.006G186000 Phaseolus vulgaris HOM05D004233 ORTHO05D003507 3.1e-07 58.9 122 36.1
Gohir.D01G215600 Gossypium hirsutum HOM05D004233 ORTHO05D003507 4.1e-07 58.5 91 42.9
Gorai.002G261800 Gossypium raimondii HOM05D004233 ORTHO05D003507 4.1e-07 58.5 91 42.9
THA.LOC104823286 Tarenaya hassleriana HOM05D004233 ORTHO05D003507 4.1e-07 58.5 127 37.0
Prupe.6G271900 Prunus persica HOM05D004233 ORTHO05D003507 5.3e-07 58.2 128 36.7
Lj6g0009965 Lotus japonicus HOM05D004233 ORTHO05D003507 7.0e-07 57.8 122 36.9
TWI77G0758 Tripterygium wilfordii HOM05D004233 ORTHO05D003507 7.0e-07 57.8 96 39.6
Lalb_Chr13g0291241 Lupinus albus HOM05D004233 ORTHO05D003507 9.1e-07 57.4 95 37.9
Aqoxy4G02651 Aquilegia oxysepala HOM05D004233 ORTHO05D003507 1.2e-06 57.0 121 37.2
Gohir.A01G225900 Gossypium hirsutum HOM05D004233 ORTHO05D003507 1.2e-06 57.0 91 41.8
Sed0017480 Sechium edule HOM05D004233 ORTHO05D003507 1.2e-06 57.0 118 34.7
Glyma.07G146500 Glycine max HOM05D004233 ORTHO05D003507 1.5e-06 56.6 132 34.8
Glyma.18G197700 Glycine max HOM05D004233 ORTHO05D003507 2.0e-06 56.2 132 34.8
CARHR083380 Cardamine hirsuta HOM05D004233 ORTHO05D003507 2.6e-06 55.8 127 44.9
Ca_00329_v3 Cicer arietinum L. HOM05D004233 ORTHO05D003507 3.4e-06 55.5 128 36.7
Sp3g07460 Schrenkiella parvula HOM05D004233 ORTHO05D003507 3.4e-06 55.5 120 45.0
PSO339G4028 Papaver somniferum HOM05D004233 ORTHO05D003507 4.5e-06 55.1 137 44.5
PSO384G2407 Papaver somniferum HOM05D004233 ORTHO05D003507 4.5e-06 55.1 140 44.3
DCAR_028820 Daucus carota HOM05D004233 ORTHO05D003507 5.9e-06 54.7 79 41.8
Thhalv10022307m.g Eutrema salsugineum HOM05D004233 ORTHO05D003507 5.9e-06 54.7 120 33.3
Gohir.D04G129214 Gossypium hirsutum HOM05D004233 ORTHO05D003507 5.9e-06 54.7 95 37.9
Gorai.012G112300 Gossypium raimondii HOM05D004233 ORTHO05D003507 5.9e-06 54.7 95 37.9
Phvul.008G106800 Phaseolus vulgaris HOM05D004233 ORTHO05D003507 7.7e-06 54.3 133 33.1
TPR.G29052 Trifolium pratense HOM05D004233 ORTHO05D003507 7.7e-06 54.3 131 35.9
TAR369G1066 Trochodendron aralioides HOM05D004233 ORTHO05D003507 7.7e-06 54.3 124 32.3


User provided reference genes

Program Settings