Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015927 Sechium edule HOM05D007356 ORTHO05D009247 4.8e-100 367.9 189 100.0
ClCG05G012060 Citrullus lanatus HOM05D007356 ORTHO05D009247 2.4e-75 285.8 185 78.9
CsaV3_3G020350 Cucumis sativus L. HOM05D007356 ORTHO05D009247 1.6e-74 283.1 169 84.6
Haze_14128 Corylus avellana HOM05D007356 ORTHO05D009247 5.4e-43 178.3 173 57.2
Cfa007946 Carpinus fangiana HOM05D007356 ORTHO05D009247 3.5e-42 175.6 173 56.1
QL02p052579 Quercus lobata HOM05D007356 ORTHO05D009247 1.1e-40 170.6 181 52.5
Ciclev10011716m.g Citrus clementina HOM05D007356 ORTHO05D009247 2.5e-40 169.5 178 53.4
Thecc.04G137600 Theobroma cacao HOM05D007356 ORTHO05D009247 2.5e-40 169.5 174 52.9
Hma1.2p1_0136F.1_g062070 Hydrangea macrophylla HOM05D007356 ORTHO05D009247 7.3e-40 167.9 173 51.4
Prupe.3G239800 Prunus persica HOM05D007356 ORTHO05D009247 3.1e-38 162.5 172 50.6
Atru.chr8.830 Acer truncatum HOM05D007356 ORTHO05D009247 6.9e-38 161.4 172 50.6
Dinv34849 Davidia involucrata HOM05D007356 ORTHO05D009247 2.0e-37 159.8 157 54.8
RcHm_v2.0_Chr2g0163141 Rosa chinensis HOM05D007356 ORTHO05D009247 3.4e-37 159.1 172 51.2
GSVIVG01036444001 Vitis vinifera HOM05D007356 ORTHO05D009247 4.4e-37 158.7 174 50.6
MD09G1084700 Malus domestica HOM05D007356 ORTHO05D009247 5.8e-37 158.3 172 50.0
Manes.01G108100 Manihot esculenta HOM05D007356 ORTHO05D009247 9.9e-37 157.5 171 52.6
Cpa.g.sc179.26 Carica papaya HOM05D007356 ORTHO05D009247 4.9e-36 155.2 173 50.3
TAR374G1737 Trochodendron aralioides HOM05D007356 ORTHO05D009247 2.4e-35 152.9 173 48.0
MD17G1074100 Malus domestica HOM05D007356 ORTHO05D009247 4.2e-35 152.1 169 47.9
CANSAT64G1351 Cannabis sativa HOM05D007356 ORTHO05D009247 5.4e-35 151.8 172 46.5
Potri.017G112500 Populus trichocarpa HOM05D007356 ORTHO05D009247 7.1e-35 151.4 172 48.8
Gohir.A11G162300 Gossypium hirsutum HOM05D007356 ORTHO05D009247 9.3e-35 151.0 174 48.3
Gohir.D11G168600 Gossypium hirsutum HOM05D007356 ORTHO05D009247 1.2e-34 150.6 183 48.6
FAN14G2396 Fragaria x ananassa HOM05D007356 ORTHO05D009247 3.5e-34 149.1 173 50.3
Lj2g0005002 Lotus japonicus HOM05D007356 ORTHO05D009247 6.0e-34 148.3 171 49.1
FAN09G4466 Fragaria x ananassa HOM05D007356 ORTHO05D009247 7.8e-34 147.9 191 47.1
Gorai.007G180100 Gossypium raimondii HOM05D007356 ORTHO05D009247 7.8e-34 147.9 179 48.0
FvH4_6g45360 Fragaria vesca HOM05D007356 ORTHO05D009247 1.3e-33 147.1 170 50.0
Phvul.004G062800 Phaseolus vulgaris HOM05D007356 ORTHO05D009247 2.3e-33 146.4 171 46.2
Glyma.13G047100 Glycine max HOM05D007356 ORTHO05D009247 3.0e-33 146.0 171 46.2
Lj2A447T55 Lonicera japonica HOM05D007356 ORTHO05D009247 3.0e-33 146.0 167 50.3
VMungo0464G1268 Vigna mungo HOM05D007356 ORTHO05D009247 5.1e-33 145.2 173 46.2
arahy.Tifrunner.gnm1.ann1.33CL05 Arachis hypogaea HOM05D007356 ORTHO05D009247 1.9e-32 143.3 175 44.6
arahy.Tifrunner.gnm1.ann1.3VIJ8X Arachis hypogaea HOM05D007356 ORTHO05D009247 3.3e-32 142.5 170 45.3
Lalb_Chr06g0174681 Lupinus albus HOM05D007356 ORTHO05D009247 3.3e-32 142.5 158 47.5
Sabra17G0093200 Salix brachista HOM05D007356 ORTHO05D009247 3.3e-32 142.5 174 47.1
Ca_26179_v3 Cicer arietinum L. HOM05D007356 ORTHO05D009247 4.3e-32 142.1 172 47.7
TPR.G32461 Trifolium pratense HOM05D007356 ORTHO05D009247 7.3e-32 141.4 167 47.9
COL.COLO4_16192 Corchorus olitorius HOM05D007356 ORTHO05D009247 1.3e-31 140.6 177 48.6
Eucgr.J01469 Eucalyptus grandis HOM05D007356 ORTHO05D009247 1.3e-31 140.6 177 44.1
Aqoxy3G03920 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 2.8e-31 139.4 169 43.8
MBI16_g25107_MAGBIO Magnolia biondii HOM05D007356 ORTHO05D009247 4.8e-31 138.7 184 47.8
Duzib133G0592 Durio zibethinus HOM05D007356 ORTHO05D009247 3.1e-30 136.0 173 47.4
PGSC0003DMG400012678 Solanum tuberosum HOM05D007356 ORTHO05D009247 4.0e-30 135.6 169 45.0
Rhsim10G0063400 Rhododendron simsii HOM05D007356 ORTHO05D009247 5.3e-30 135.2 173 44.5
ECA232G5000 Erigeron canadensis HOM05D007356 ORTHO05D009247 1.2e-29 134.0 177 43.5
Sopen02g030430 Solanum pennellii HOM05D007356 ORTHO05D009247 3.4e-29 132.5 169 42.6
THA.LOC104820954 Tarenaya hassleriana HOM05D007356 ORTHO05D009247 4.5e-29 132.1 172 41.3
TWI79G1397 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 4.5e-29 132.1 175 43.4
Nitab4.5_0008781g0020 Nicotiana tabacum HOM05D007356 ORTHO05D009247 5.8e-29 131.7 175 44.6
Psat1g012920 Pisum sativum HOM05D007356 ORTHO05D009247 5.8e-29 131.7 171 44.4
Peaxi162Scf01327g00135 Petunia axillaris HOM05D007356 ORTHO05D009247 9.9e-29 131.0 169 45.0
Solyc02g085740.4 Solanum lycopersicum HOM05D007356 ORTHO05D009247 2.9e-28 129.4 169 42.0
TWI31G0521 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 2.9e-28 129.4 173 43.9
Aqoxy3G02147 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 6.4e-28 128.3 137 47.4
PSO063G7355 Papaver somniferum HOM05D007356 ORTHO05D009247 1.4e-27 127.1 170 42.9
HanXRQChr14g0438671 Helianthus annuus HOM05D007356 ORTHO05D009247 1.9e-27 126.7 176 43.2
Medtr6g017235 Medicago truncatula HOM05D007356 ORTHO05D009247 1.9e-27 126.7 173 42.2
SGA_v2.0_scaffold33G13428 Striga asiatica HOM05D007356 ORTHO05D009247 2.7e-26 122.9 183 41.5
Lsat_1_v5_gn_4_153101 Lactuca sativa HOM05D007356 ORTHO05D009247 6.0e-26 121.7 174 41.4
Migut.H00199 Erythranthe guttata HOM05D007356 ORTHO05D009247 1.8e-25 120.2 169 42.6
vmacro05573 Vaccinium macrocarpon HOM05D007356 ORTHO05D009247 3.9e-25 119.0 216 36.1
CDE08G0776 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 1.1e-24 117.5 178 40.4
Nn4g23745 Nelumbo nucifera HOM05D007356 ORTHO05D009247 2.5e-24 116.3 170 41.8
unitig_60.g25515 Utricularia gibba HOM05D007356 ORTHO05D009247 7.4e-24 114.8 175 39.4
Oeu030757.2 Olea europaea HOM05D007356 ORTHO05D009247 1.6e-23 113.6 140 46.4
Cc07_g09030 Coffea canephora HOM05D007356 ORTHO05D009247 2.8e-23 112.8 172 39.0
EL10Ac2g04607 Beta vulgaris HOM05D007356 ORTHO05D009247 3.7e-23 112.5 175 39.4
CiPaw.03G059600 Carya illinoinensis HOM05D007356 ORTHO05D009247 4.8e-23 112.1 110 53.6
Ah.16g101940 Amaranthus hybridus HOM05D007356 ORTHO05D009247 1.1e-22 110.9 171 40.9
AUR62008964 Chenopodium quinoa HOM05D007356 ORTHO05D009247 3.4e-21 105.9 173 39.3
AL3G11850 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 5.8e-21 105.1 175 40.0
Aa31LG5G12990 Aethionema arabicum HOM05D007356 ORTHO05D009247 1.7e-20 103.6 166 36.7
Nitab4.5_0004118g0090 Nicotiana tabacum HOM05D007356 ORTHO05D009247 1.7e-20 103.6 136 44.1
Sc11g0008210 Simmondsia chinensis HOM05D007356 ORTHO05D009247 7.1e-19 98.2 133 43.6
Os01g0694200 Oryza sativa ssp. japonica HOM05D007356 ORTHO05D009247 1.0e-17 94.4 177 33.9
Hund13734 Selenicereus undatus HOM05D007356 ORTHO05D009247 2.3e-17 93.2 190 34.2
Lsat_1_v5_gn_3_87441 Lactuca sativa HOM05D007356 ORTHO05D009247 3.9e-17 92.4 111 43.2
CARHR076490 Cardamine hirsuta HOM05D007356 ORTHO05D009247 7.4e-16 88.2 177 36.7
ATR0681G386 Amborella trichopoda HOM05D007356 ORTHO05D009247 1.3e-15 87.4 182 34.1
CDE02G0316 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 1.6e-15 87.0 128 39.8
AUR62014539 Chenopodium quinoa HOM05D007356 ORTHO05D009247 1.1e-14 84.3 146 37.7
Zm00001eb155990 Zea mays HOM05D007356 ORTHO05D009247 1.8e-14 83.6 176 36.9
DCAR_017218 Daucus carota HOM05D007356 ORTHO05D009247 3.1e-14 82.8 137 35.8
Potri.004G102400 Populus trichocarpa HOM05D007356 ORTHO05D009247 5.8e-13 78.6 97 45.4
CSS0016710 Camellia sinensis var. sinensis HOM05D007356 ORTHO05D009247 1.7e-12 77.0 94 46.8
Actinidia18124 Actinidia chinensis HOM05D007356 ORTHO05D009247 6.5e-12 75.1 96 44.8
SEGI_12886 Sequoiadendron giganteum HOM05D007356 ORTHO05D009247 1.4e-11 73.9 126 35.7
PSO782G4491 Papaver somniferum HOM05D007356 ORTHO05D009247 7.1e-11 71.6 95 46.3
Glyma.19G045202 Glycine max HOM05D007356 ORTHO05D009247 6.1e-10 68.6 88 44.3
PGR042G1693 Punica granatum HOM05D007356 ORTHO05D009247 1.8e-09 67.0 78 46.2
AagrBONN_evm.TU.Sc2ySwM_344.3211 Anthoceros agrestis HOM05D007356 ORTHO05D009247 3.9e-09 65.9 163 27.0
Pp3c9_14770 Physcomitrium patens HOM05D007356 ORTHO05D009247 2.5e-08 63.2 200 27.0
Actinidia15867 Actinidia chinensis HOM05D007356 ORTHO05D009247 1.8e-06 57.0 63 44.4


User provided reference genes

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