Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015909 Sechium edule HOM05D007059 ORTHO05D009155 3.5e-129 464.9 227 100.0
ClCG11G001160 Citrullus lanatus HOM05D007059 ORTHO05D009155 7.8e-97 357.5 234 81.6
MELO3C020030.2 Cucumis melo HOM05D007059 ORTHO05D009155 1.5e-95 353.2 228 81.6
Atru.chr11.1222 Acer truncatum HOM05D007059 ORTHO05D009155 3.0e-72 275.8 232 62.5
GSVIVG01010187001 Vitis vinifera HOM05D007059 ORTHO05D009155 1.9e-71 273.1 232 62.1
TAR629G1440 Trochodendron aralioides HOM05D007059 ORTHO05D009155 5.7e-71 271.6 232 62.5
Prupe.1G344600 Prunus persica HOM05D007059 ORTHO05D009155 2.1e-70 269.6 235 63.4
Thecc.02G295400 Theobroma cacao HOM05D007059 ORTHO05D009155 2.1e-70 269.6 237 61.2
Potri.010G169700 Populus trichocarpa HOM05D007059 ORTHO05D009155 6.2e-70 268.1 241 59.8
COL.COLO4_16620 Corchorus olitorius HOM05D007059 ORTHO05D009155 1.4e-69 266.9 235 61.7
Ciclev10033522m.g Citrus clementina HOM05D007059 ORTHO05D009155 3.1e-69 265.8 233 62.2
CiPaw.05G167400 Carya illinoinensis HOM05D007059 ORTHO05D009155 4.1e-69 265.4 228 64.0
Sabra10G0129500 Salix brachista HOM05D007059 ORTHO05D009155 6.9e-69 264.6 241 59.3
RcHm_v2.0_Chr4g0446371 Rosa chinensis HOM05D007059 ORTHO05D009155 4.5e-68 261.9 230 62.2
Nn4g24915 Nelumbo nucifera HOM05D007059 ORTHO05D009155 5.8e-68 261.5 231 61.0
FvH4_4g36660 Fragaria vesca HOM05D007059 ORTHO05D009155 1.7e-67 260.0 228 61.0
FAN12G0665 Fragaria x ananassa HOM05D007059 ORTHO05D009155 1.7e-67 260.0 228 61.0
FAN07G2854 Fragaria x ananassa HOM05D007059 ORTHO05D009155 6.5e-67 258.1 228 61.0
Glyma.11G104100 Glycine max HOM05D007059 ORTHO05D009155 2.5e-66 256.1 220 61.8
MD16G1006000 Malus domestica HOM05D007059 ORTHO05D009155 3.2e-66 255.8 231 61.0
Medtr4g074210 Medicago truncatula HOM05D007059 ORTHO05D009155 3.2e-66 255.8 221 61.1
VMungo1127G1389 Vigna mungo HOM05D007059 ORTHO05D009155 7.1e-66 254.6 220 61.4
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 9.3e-66 254.2 233 60.5
Manes.16G044801 Manihot esculenta HOM05D007059 ORTHO05D009155 2.1e-65 253.1 232 60.8
Phvul.011G032300 Phaseolus vulgaris HOM05D007059 ORTHO05D009155 2.7e-65 252.7 220 61.8
Glyma.12G029100 Glycine max HOM05D007059 ORTHO05D009155 4.6e-65 251.9 220 60.0
CSS0038027 Camellia sinensis var. sinensis HOM05D007059 ORTHO05D009155 1.0e-64 250.8 231 60.6
TPR.G21564 Trifolium pratense HOM05D007059 ORTHO05D009155 1.3e-64 250.4 210 62.9
Ca_03042_v3 Cicer arietinum L. HOM05D007059 ORTHO05D009155 5.1e-64 248.4 220 60.9
Lj3A851T65 Lonicera japonica HOM05D007059 ORTHO05D009155 6.7e-64 248.1 244 57.0
PGSC0003DMG400032539 Solanum tuberosum HOM05D007059 ORTHO05D009155 6.7e-64 248.1 206 65.5
MBI06_g22349_MAGBIO Magnolia biondii HOM05D007059 ORTHO05D009155 1.5e-63 246.9 185 68.1
Psat7g174240 Pisum sativum HOM05D007059 ORTHO05D009155 1.5e-63 246.9 211 63.0
Gohir.D01G138500 Gossypium hirsutum HOM05D007059 ORTHO05D009155 1.9e-63 246.5 236 58.5
Lalb_Chr01g0001591 Lupinus albus HOM05D007059 ORTHO05D009155 1.9e-63 246.5 225 57.3
Sopen04g004490 Solanum pennellii HOM05D007059 ORTHO05D009155 2.5e-63 246.1 205 64.9
Gorai.002G167400 Gossypium raimondii HOM05D007059 ORTHO05D009155 3.3e-63 245.7 236 58.5
Gohir.A01G145900 Gossypium hirsutum HOM05D007059 ORTHO05D009155 1.3e-62 243.8 236 58.5
Solyc04g009370.4 Solanum lycopersicum HOM05D007059 ORTHO05D009155 1.3e-62 243.8 205 64.4
Rhsim04G0168700 Rhododendron simsii HOM05D007059 ORTHO05D009155 2.2e-62 243.0 180 68.9
Actinidia38411 Actinidia chinensis HOM05D007059 ORTHO05D009155 2.8e-62 242.7 174 73.0
CAN.G624.23 Capsicum annuum HOM05D007059 ORTHO05D009155 3.7e-62 242.3 156 78.2
Eucgr.G02016 Eucalyptus grandis HOM05D007059 ORTHO05D009155 8.2e-62 241.1 235 58.3
Nitab4.5_0007261g0020 Nicotiana tabacum HOM05D007059 ORTHO05D009155 8.2e-62 241.1 156 75.6
Nitab4.5_0002113g0150 Nicotiana tabacum HOM05D007059 ORTHO05D009155 1.1e-61 240.7 156 75.6
Peaxi162Scf01172g00004 Petunia axillaris HOM05D007059 ORTHO05D009155 1.1e-61 240.7 216 59.7
PSO063G1277 Papaver somniferum HOM05D007059 ORTHO05D009155 1.8e-61 240.0 235 56.6
Cc11_g00200 Coffea canephora HOM05D007059 ORTHO05D009155 3.1e-61 239.2 232 59.1
PSO782G1004 Papaver somniferum HOM05D007059 ORTHO05D009155 4.1e-61 238.8 235 56.6
Migut.E00704 Erythranthe guttata HOM05D007059 ORTHO05D009155 4.5e-60 235.3 224 56.7
vmacro08590 Vaccinium macrocarpon HOM05D007059 ORTHO05D009155 4.5e-60 235.3 180 68.9
ECA234G4546 Erigeron canadensis HOM05D007059 ORTHO05D009155 7.7e-60 234.6 153 75.2
unitig_27.g25281 Utricularia gibba HOM05D007059 ORTHO05D009155 1.7e-59 233.4 165 72.1
Lj3g0001367 Lotus japonicus HOM05D007059 ORTHO05D009155 5.0e-59 231.9 225 56.4
Lsat_1_v5_gn_4_26421 Lactuca sativa HOM05D007059 ORTHO05D009155 1.1e-58 230.7 128 85.9
Sc10g0008670 Simmondsia chinensis HOM05D007059 ORTHO05D009155 1.4e-58 230.3 152 75.0
HanXRQChr01g0028541 Helianthus annuus HOM05D007059 ORTHO05D009155 2.5e-58 229.6 131 82.4
MSTRG.2053 Avicennia marina HOM05D007059 ORTHO05D009155 3.2e-58 229.2 157 73.2
CANSAT35G1437 Cannabis sativa HOM05D007059 ORTHO05D009155 4.2e-58 228.8 142 78.2
ATR0124G031 Amborella trichopoda HOM05D007059 ORTHO05D009155 9.4e-58 227.6 128 82.0
CARHR095430 Cardamine hirsuta HOM05D007059 ORTHO05D009155 2.1e-57 226.5 231 56.3
arahy.Tifrunner.gnm1.ann1.NRJ0Q8 Arachis hypogaea HOM05D007059 ORTHO05D009155 4.6e-57 225.3 146 76.0
arahy.Tifrunner.gnm1.ann1.PC0HA4 Arachis hypogaea HOM05D007059 ORTHO05D009155 4.6e-57 225.3 146 76.0
EL10Ac9g22903 Beta vulgaris HOM05D007059 ORTHO05D009155 4.6e-57 225.3 153 71.2
Aa31LG8G6740 Aethionema arabicum HOM05D007059 ORTHO05D009155 6.1e-57 224.9 125 84.8
Aqoxy3G04246 Aquilegia oxysepala HOM05D007059 ORTHO05D009155 7.9e-57 224.6 177 67.2
BcaC09g48947 Brassica carinata HOM05D007059 ORTHO05D009155 1.8e-56 223.4 204 60.8
C01p44250 Brassica napus HOM05D007059 ORTHO05D009155 1.8e-56 223.4 204 60.8
BolC1t04385H Brassica oleracea HOM05D007059 ORTHO05D009155 1.8e-56 223.4 204 60.8
AL3G33460 Arabidopsis lyrata HOM05D007059 ORTHO05D009155 3.0e-56 222.6 156 72.4
AUR62017646 Chenopodium quinoa HOM05D007059 ORTHO05D009155 3.0e-56 222.6 153 70.6
Cpa.g.sc298.2 Carica papaya HOM05D007059 ORTHO05D009155 8.8e-56 221.1 221 56.6
AUR62012864 Chenopodium quinoa HOM05D007059 ORTHO05D009155 8.8e-56 221.1 153 69.9
A01p34850 Brassica napus HOM05D007059 ORTHO05D009155 1.1e-55 220.7 229 54.1
BraA01t03568Z Brassica rapa HOM05D007059 ORTHO05D009155 1.1e-55 220.7 229 54.1
HPP92_002491 Vanilla planifolia HOM05D007059 ORTHO05D009155 1.5e-55 220.3 171 64.9
HPP92_002544 Vanilla planifolia HOM05D007059 ORTHO05D009155 1.5e-55 220.3 171 64.9
Thhalv10021482m.g Eutrema salsugineum HOM05D007059 ORTHO05D009155 2.5e-55 219.5 231 55.0
Duzib251G0490 Durio zibethinus HOM05D007059 ORTHO05D009155 3.3e-55 219.2 235 53.2
Sp3g17910 Schrenkiella parvula HOM05D007059 ORTHO05D009155 3.3e-55 219.2 157 70.1
TWI77G0260 Tripterygium wilfordii HOM05D007059 ORTHO05D009155 5.7e-55 218.4 203 59.6
Zm00001eb259420 Zea mays HOM05D007059 ORTHO05D009155 7.4e-55 218.0 126 81.0
CsaV3_5G013210 Cucumis sativus L. HOM05D007059 ORTHO05D009155 9.7e-55 217.6 168 72.0
Carub.0003s1980 Capsella rubella HOM05D007059 ORTHO05D009155 2.2e-54 216.5 161 68.9
Oeu027905.1 Olea europaea HOM05D007059 ORTHO05D009155 8.2e-54 214.5 149 71.8
Haze_11738 Corylus avellana HOM05D007059 ORTHO05D009155 3.4e-52 209.1 212 56.1
Pp3c2_14430 Physcomitrium patens HOM05D007059 ORTHO05D009155 3.8e-51 205.7 180 60.6
Hund08500 Selenicereus undatus HOM05D007059 ORTHO05D009155 8.5e-51 204.5 216 53.7
SMO114G0039 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 2.5e-50 203.0 125 76.8
AagrBONN_evm.TU.Sc2ySwM_344.1288 Anthoceros agrestis HOM05D007059 ORTHO05D009155 1.6e-49 200.3 157 62.4
Migut.E00613 Erythranthe guttata HOM05D007059 ORTHO05D009155 1.1e-47 194.1 209 51.2
Pp3c10_16080 Physcomitrium patens HOM05D007059 ORTHO05D009155 2.0e-47 193.4 167 59.3
THA.LOC104801903 Tarenaya hassleriana HOM05D007059 ORTHO05D009155 2.6e-47 193.0 171 62.0
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 6.3e-46 188.3 111 80.2
Mapoly0055s0010 Marchantia polymorpha HOM05D007059 ORTHO05D009155 1.8e-45 186.8 155 58.1
SGA_v2.0_scaffold88G27235 Striga asiatica HOM05D007059 ORTHO05D009155 3.5e-44 182.6 142 63.4
Actinidia13703 Actinidia chinensis HOM05D007059 ORTHO05D009155 2.6e-39 166.4 170 56.5
Dinv01917 Davidia involucrata HOM05D007059 ORTHO05D009155 9.1e-37 157.9 230 45.7
PGR031G0357 Punica granatum HOM05D007059 ORTHO05D009155 5.9e-36 155.2 232 45.3
CDE04G0067 Ceratophyllum demersum HOM05D007059 ORTHO05D009155 3.8e-35 152.5 130 62.3
CBR_g48375 Chara braunii HOM05D007059 ORTHO05D009155 3.8e-35 152.5 183 44.8
Actinidia14379 Actinidia chinensis HOM05D007059 ORTHO05D009155 1.4e-21 107.5 56 87.5
BolC5t33201H Brassica oleracea HOM05D007059 ORTHO05D009155 2.7e-20 103.2 84 64.3
AT3G19900 Arabidopsis thaliana HOM05D007059 ORTHO05D009155 5.0e-19 99.0 90 60.0
SEGI_27177 Sequoiadendron giganteum HOM05D007059 ORTHO05D009155 5.0e-19 99.0 61 73.8
SMO364G0884 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 1.0e-16 91.3 65 69.2
Cre01.g007050 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D009155 1.8e-16 90.5 112 43.8
Cre03.g197850 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D034487 1.6e-12 77.4 113 34.5
BraA05t21808Z Brassica rapa HOM05D007059 ORTHO05D040342 9.5e-10 68.2 45 73.3
MCO14G049 Micromonas commoda HOM05D007059 ORTHO05D009155 2.8e-09 66.6 101 36.6
A05p29230 Brassica napus HOM05D007059 ORTHO05D040342 8.0e-09 65.1 45 71.1


User provided reference genes

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