Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015889 Sechium edule HOM05D005019 ORTHO05D006625 0.0e+00 1078.2 571 100.0
ClCG02G012250 Citrullus lanatus HOM05D005019 ORTHO05D006625 1.4e-272 942.6 571 84.9
MELO3C020849.2 Cucumis melo HOM05D005019 ORTHO05D006625 3.0e-270 934.9 571 85.3
CsaV3_2G016400 Cucumis sativus L. HOM05D005019 ORTHO05D006625 3.2e-264 914.8 571 82.8
ClCG07G000610 Citrullus lanatus HOM05D005019 ORTHO05D006625 9.3e-264 913.3 558 86.6
Prupe.8G231800 Prunus persica HOM05D005019 ORTHO05D006625 1.3e-228 796.6 571 72.2
Dinv34572 Davidia involucrata HOM05D005019 ORTHO05D006625 3.6e-223 778.5 504 77.0
Ciclev10019516m.g Citrus clementina HOM05D005019 ORTHO05D006625 8.0e-223 777.3 571 72.0
Cfa002330 Carpinus fangiana HOM05D005019 ORTHO05D006625 5.2e-222 774.6 571 70.4
CANSAT35G0193 Cannabis sativa HOM05D005019 ORTHO05D006625 6.8e-222 774.2 573 72.6
CiPaw.03G257900 Carya illinoinensis HOM05D005019 ORTHO05D006625 8.8e-222 773.9 571 69.7
Prupe.5G054300 Prunus persica HOM05D005019 ORTHO05D006625 8.8e-222 773.9 571 69.9
Gorai.007G378500 Gossypium raimondii HOM05D005019 ORTHO05D006625 4.4e-221 771.5 572 72.2
Gohir.A11G329100 Gossypium hirsutum HOM05D005019 ORTHO05D006625 7.5e-221 770.8 571 72.7
Gohir.D11G348100 Gossypium hirsutum HOM05D005019 ORTHO05D006625 7.5e-221 770.8 572 72.0
Thecc.01G159500 Theobroma cacao HOM05D005019 ORTHO05D006625 1.3e-220 770.0 573 72.3
Dinv22477 Davidia involucrata HOM05D005019 ORTHO05D006625 8.3e-220 767.3 572 69.4
Duzib147G1145 Durio zibethinus HOM05D005019 ORTHO05D006625 1.1e-219 766.9 571 72.5
FvH4_5g20520 Fragaria vesca HOM05D005019 ORTHO05D006625 1.4e-219 766.5 571 69.9
GSVIVG01000726001 Vitis vinifera HOM05D005019 ORTHO05D006625 1.4e-219 766.5 571 69.4
Gohir.D04G014300 Gossypium hirsutum HOM05D005019 ORTHO05D006625 1.8e-219 766.1 572 71.7
Gorai.012G016900 Gossypium raimondii HOM05D005019 ORTHO05D006625 2.4e-219 765.8 572 71.9
Manes.16G024300 Manihot esculenta HOM05D005019 ORTHO05D006625 2.4e-219 765.8 572 70.5
FAN18G2643 Fragaria x ananassa HOM05D005019 ORTHO05D006625 9.1e-219 763.8 571 69.7
Potri.005G218600 Populus trichocarpa HOM05D005019 ORTHO05D006625 2.7e-218 762.3 505 77.0
Lj1C59T1 Lonicera japonica HOM05D005019 ORTHO05D006625 3.8e-217 758.4 571 70.8
Actinidia21157 Actinidia chinensis HOM05D005019 ORTHO05D006625 5.0e-217 758.1 571 69.7
Eucgr.K03309 Eucalyptus grandis HOM05D005019 ORTHO05D006625 6.5e-217 757.7 575 69.4
Cc02_g22310 Coffea canephora HOM05D005019 ORTHO05D006625 1.1e-216 756.9 577 68.3
FAN04G2884 Fragaria x ananassa HOM05D005019 ORTHO05D006625 1.1e-216 756.9 571 69.2
FAN20G1740 Fragaria x ananassa HOM05D005019 ORTHO05D006625 1.9e-216 756.1 574 68.1
RcHm_v2.0_Chr6g0289431 Rosa chinensis HOM05D005019 ORTHO05D006625 1.9e-216 756.1 505 75.0
Haze_24536 Corylus avellana HOM05D005019 ORTHO05D006625 5.5e-216 754.6 492 77.0
MD05G1205400 Malus domestica HOM05D005019 ORTHO05D006625 5.5e-216 754.6 577 70.2
FvH4_2g22480 Fragaria vesca HOM05D005019 ORTHO05D006625 1.2e-215 753.4 505 75.0
arahy.Tifrunner.gnm1.ann1.TZR8AU Arachis hypogaea HOM05D005019 ORTHO05D006625 1.6e-215 753.1 501 75.0
MD10G1192400 Malus domestica HOM05D005019 ORTHO05D006625 2.1e-215 752.7 505 75.2
Ca_00175_v3 Cicer arietinum L. HOM05D005019 ORTHO05D006625 2.7e-215 752.3 506 73.7
FAN24G1214 Fragaria x ananassa HOM05D005019 ORTHO05D006625 2.7e-215 752.3 505 74.9
FAN27G0650 Fragaria x ananassa HOM05D005019 ORTHO05D006625 1.0e-214 750.4 505 74.7
TWI31G0602 Tripterygium wilfordii HOM05D005019 ORTHO05D006625 4.0e-214 748.4 574 68.1
Psat1g046760 Pisum sativum HOM05D005019 ORTHO05D006625 6.8e-214 747.7 508 73.6
VMungo0540G2473 Vigna mungo HOM05D005019 ORTHO05D006625 6.8e-214 747.7 509 74.3
PGR044G0331 Punica granatum HOM05D005019 ORTHO05D006625 1.2e-213 746.9 574 68.1
TAR633G0331 Trochodendron aralioides HOM05D005019 ORTHO05D006625 5.7e-213 744.6 564 67.9
Rhsim07G0080400 Rhododendron simsii HOM05D005019 ORTHO05D006625 7.5e-213 744.2 506 74.7
Lj1P543T22 Lonicera japonica HOM05D005019 ORTHO05D006625 9.8e-213 743.8 502 75.1
Glyma.13G255400 Glycine max HOM05D005019 ORTHO05D006625 2.2e-212 742.7 574 68.1
Cpa.g.sc200.5 Carica papaya HOM05D005019 ORTHO05D006625 4.8e-212 741.5 502 73.5
Atru.chr5.1578 Acer truncatum HOM05D005019 ORTHO05D006625 1.1e-211 740.3 571 68.5
Glyma.15G059400 Glycine max HOM05D005019 ORTHO05D006625 1.1e-211 740.3 574 66.9
FAN15G0975 Fragaria x ananassa HOM05D005019 ORTHO05D006625 1.4e-211 740.0 505 74.3
Medtr2g009800 Medicago truncatula HOM05D005019 ORTHO05D006625 7.0e-211 737.6 505 72.3
Sc04g0003030 Simmondsia chinensis HOM05D005019 ORTHO05D006625 9.1e-211 737.3 502 73.7
Phvul.006G200700 Phaseolus vulgaris HOM05D005019 ORTHO05D006625 2.0e-210 736.1 574 67.2
Lalb_Chr19g0134621 Lupinus albus HOM05D005019 ORTHO05D006625 6.6e-209 731.1 506 73.1
Sabra05G0167700 Salix brachista HOM05D005019 ORTHO05D006625 6.6e-209 731.1 493 75.7
Nitab4.5_0010414g0010 Nicotiana tabacum HOM05D005019 ORTHO05D006625 8.0e-207 724.2 505 73.7
Lj1g0019097 Lotus japonicus HOM05D005019 ORTHO05D006625 1.8e-206 723.0 510 72.2
Medtr2g101620 Medicago truncatula HOM05D005019 ORTHO05D006625 4.0e-206 721.8 505 70.5
Psat1g214520 Pisum sativum HOM05D005019 ORTHO05D006625 5.2e-206 721.5 505 71.1
PGSC0003DMG400023686 Solanum tuberosum HOM05D005019 ORTHO05D006625 5.2e-206 721.5 506 72.9
TPR.G9511 Trifolium pratense HOM05D005019 ORTHO05D006625 6.8e-206 721.1 505 71.1
Gohir.A05G401500 Gossypium hirsutum HOM05D005019 ORTHO05D006625 1.2e-205 720.3 572 68.9
Nitab4.5_0008299g0020 Nicotiana tabacum HOM05D005019 ORTHO05D006625 1.2e-205 720.3 505 72.7
Peaxi162Scf00045g00177 Petunia axillaris HOM05D005019 ORTHO05D006625 7.5e-205 717.6 503 71.8
Lalb_Chr03g0030271 Lupinus albus HOM05D005019 ORTHO05D006625 1.7e-204 716.5 506 71.1
Nitab4.5_0003006g0020 Nicotiana tabacum HOM05D005019 ORTHO05D006625 2.2e-204 716.1 505 72.7
Migut.N02183 Erythranthe guttata HOM05D005019 ORTHO05D006625 2.8e-204 715.7 505 70.9
Nn7g37931 Nelumbo nucifera HOM05D005019 ORTHO05D006625 4.1e-203 711.8 492 71.3
Sopen10g030790 Solanum pennellii HOM05D005019 ORTHO05D006625 9.2e-203 710.7 506 71.7
Oeu018172.1 Olea europaea HOM05D005019 ORTHO05D006625 1.6e-202 709.9 571 67.4
Nitab4.5_0001370g0040 Nicotiana tabacum HOM05D005019 ORTHO05D006625 2.7e-202 709.1 503 72.4
Ah.02g113910 Amaranthus hybridus HOM05D005019 ORTHO05D006625 1.0e-201 707.2 580 64.3
Solyc10g080180.3 Solanum lycopersicum HOM05D005019 ORTHO05D006625 1.5e-200 703.4 504 71.4
DCAR_002684 Daucus carota HOM05D005019 ORTHO05D006625 1.9e-200 703.0 505 70.7
EL10Ac5g11096 Beta vulgaris HOM05D005019 ORTHO05D006625 4.3e-200 701.8 504 69.4
SalBow3G3235 Salvia bowleyana HOM05D005019 ORTHO05D006625 6.1e-199 698.0 508 68.7
HanXRQChr14g0454081 Helianthus annuus HOM05D005019 ORTHO05D006625 1.4e-198 696.8 571 66.7
GSVIVG01003806001 Vitis vinifera HOM05D005019 ORTHO05D006625 1.8e-198 696.4 572 66.1
ECA247G2036 Erigeron canadensis HOM05D005019 ORTHO05D006625 4.0e-198 695.3 504 71.0
SalBow6G4122 Salvia bowleyana HOM05D005019 ORTHO05D006625 6.8e-198 694.5 506 69.8
RcHm_v2.0_Chr7g0205871 Rosa chinensis HOM05D005019 ORTHO05D006625 7.5e-197 691.0 429 79.5
AUR62037688 Chenopodium quinoa HOM05D005019 ORTHO05D006625 1.3e-196 690.3 510 69.0
AUR62008493 Chenopodium quinoa HOM05D005019 ORTHO05D006625 2.9e-196 689.1 505 69.5
HPP92_026109 Vanilla planifolia HOM05D005019 ORTHO05D006625 8.3e-196 687.6 506 68.4
PSO210G0391 Papaver somniferum HOM05D005019 ORTHO05D006625 1.9e-195 686.4 571 62.9
PSO210G5187 Papaver somniferum HOM05D005019 ORTHO05D006625 3.2e-195 685.6 571 62.7
MSTRG.12540 Avicennia marina HOM05D005019 ORTHO05D006625 2.0e-194 682.9 575 61.6
Lsat_1_v5_gn_9_9921 Lactuca sativa HOM05D005019 ORTHO05D006625 2.3e-193 679.5 575 64.7
SGA_v2.0_scaffold80G25914 Striga asiatica HOM05D005019 ORTHO05D006625 3.9e-193 678.7 513 66.9
Aa31LG11G14850 Aethionema arabicum HOM05D005019 ORTHO05D006625 8.6e-193 677.6 506 68.4
CSS0021329 Camellia sinensis var. sinensis HOM05D005019 ORTHO05D006625 1.1e-192 677.2 575 65.4
Aqoxy6G01670 Aquilegia oxysepala HOM05D005019 ORTHO05D006625 3.6e-191 672.2 505 68.5
THA.LOC104806394 Tarenaya hassleriana HOM05D005019 ORTHO05D006625 1.1e-190 670.6 508 67.5
Lsat_1_v5_gn_8_3120 Lactuca sativa HOM05D005019 ORTHO05D006625 2.3e-190 669.5 506 68.0
Aqoxy5G00344 Aquilegia oxysepala HOM05D005019 ORTHO05D006625 4.0e-190 668.7 503 68.6
vmacro14869 Vaccinium macrocarpon HOM05D005019 ORTHO05D006625 4.0e-190 668.7 496 67.9
AT5G14050 Arabidopsis thaliana HOM05D005019 ORTHO05D006625 2.2e-188 662.9 511 67.7
ATR0564G197 Amborella trichopoda HOM05D005019 ORTHO05D006625 2.9e-188 662.5 588 59.7
Thhalv10013183m.g Eutrema salsugineum HOM05D005019 ORTHO05D006625 2.9e-188 662.5 511 67.7
Carub.0006s1224 Capsella rubella HOM05D005019 ORTHO05D006625 4.9e-188 661.8 513 66.9
CARHR199310 Cardamine hirsuta HOM05D005019 ORTHO05D006625 8.3e-188 661.0 578 61.8
Lj6g0023367 Lotus japonicus HOM05D005019 ORTHO05D006625 7.1e-187 657.9 506 67.6
AL6G24710 Arabidopsis lyrata HOM05D005019 ORTHO05D006625 3.5e-186 655.6 505 66.9
AUR62021601 Chenopodium quinoa HOM05D005019 ORTHO05D006625 3.0e-185 652.5 484 69.2
Hund02608 Selenicereus undatus HOM05D005019 ORTHO05D006625 3.0e-185 652.5 509 66.4
Sp6g29950 Schrenkiella parvula HOM05D005019 ORTHO05D006625 1.5e-184 650.2 507 66.7
AUR62025557 Chenopodium quinoa HOM05D005019 ORTHO05D006625 2.1e-183 646.4 560 61.2
MBI12_g17287_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D006625 2.3e-182 642.9 504 66.9
Thecc.05G016300 Theobroma cacao HOM05D005019 ORTHO05D006625 4.9e-180 635.2 423 75.2
Zm00001eb227850 Zea mays HOM05D005019 ORTHO05D006625 1.2e-173 614.0 576 60.1
SHI13722 Sapria himalayana HOM05D005019 ORTHO05D006625 2.9e-172 609.4 511 62.0
Os07g0603200 Oryza sativa ssp. japonica HOM05D005019 ORTHO05D006625 8.7e-169 597.8 512 60.4
unitig_8.g4702 Utricularia gibba HOM05D005019 ORTHO05D006625 5.6e-168 595.1 505 58.8
Ciclev10006829m.g Citrus clementina HOM05D005019 ORTHO05D006625 2.8e-167 592.8 505 64.8
CDE04G3201 Ceratophyllum demersum HOM05D005019 ORTHO05D006625 2.2e-164 583.2 445 67.0
Hma1.2p1_1029F.1_g249600 Hydrangea macrophylla HOM05D005019 ORTHO05D006625 3.2e-163 579.3 351 79.8
SEGI_19346 Sequoiadendron giganteum HOM05D005019 ORTHO05D006625 5.4e-163 578.6 506 59.5
HPP92_022900 Vanilla planifolia HOM05D005019 ORTHO05D006625 5.1e-161 572.0 385 71.4
Mapoly0051s0055 Marchantia polymorpha HOM05D005019 ORTHO05D006625 1.9e-139 500.4 441 56.2
CDE02G2819 Ceratophyllum demersum HOM05D005019 ORTHO05D006625 3.2e-139 499.6 490 59.8
AagrBONN_evm.TU.Sc2ySwM_362.2571 Anthoceros agrestis HOM05D005019 ORTHO05D006625 7.2e-139 498.4 486 54.3
SMO356G0724 Selaginella moellendorffii HOM05D005019 ORTHO05D006625 1.4e-129 467.6 510 49.8
QL02p075842 Quercus lobata HOM05D005019 ORTHO05D006625 8.2e-127 458.4 504 52.6
Rhsim01G0269300 Rhododendron simsii HOM05D005019 ORTHO05D006625 8.2e-119 431.8 258 78.7
CBR_g21842 Chara braunii HOM05D005019 ORTHO05D006625 5.3e-118 429.1 521 43.0
Pp3c26_4890 Physcomitrium patens HOM05D005019 ORTHO05D006625 5.7e-112 409.1 444 49.3
Actinidia24938 Actinidia chinensis HOM05D005019 ORTHO05D006625 8.8e-105 385.2 453 51.9
AUR62008687 Chenopodium quinoa HOM05D005019 ORTHO05D006625 3.7e-103 379.8 479 46.6
CSS0011909 Camellia sinensis var. sinensis HOM05D005019 ORTHO05D006625 1.2e-98 364.8 503 44.7
MBI17_g40264_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D006625 8.3e-95 352.1 321 60.4
AagrBONN_evm.TU.Sc2ySwM_228.5554 Anthoceros agrestis HOM05D005019 ORTHO05D006625 5.2e-89 332.8 306 55.6
Cre06.g255950 Chlamydomonas reinhardtii HOM05D005019 ORTHO05D006625 7.8e-85 318.9 471 39.3
MBI17_g13392_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D012924 8.3e-79 298.9 381 48.3
MCO01G264 Micromonas commoda HOM05D005019 ORTHO05D006625 2.1e-74 284.3 456 37.3
PRCOL_00000196 Prasinoderma coloniale HOM05D005019 ORTHO05D006625 3.3e-67 260.4 326 42.0
BcaNung06034 Brassica carinata HOM05D005019 ORTHO05D006625 2.1e-66 257.7 242 59.9
TAR383G0651 Trochodendron aralioides HOM05D005019 ORTHO05D006625 2.9e-47 194.1 581 30.3
BcaB01g06348 Brassica carinata HOM05D005019 ORTHO05D006625 4.9e-39 166.8 240 43.3
MD05G1205300 Malus domestica HOM05D005019 ORTHO05D048639 1.4e-33 148.7 173 53.2
Cfa024923 Carpinus fangiana HOM05D005019 ORTHO05D126389 3.1e-33 147.5 537 24.0
QL02p076237 Quercus lobata HOM05D005019 ORTHO05D006625 7.4e-19 99.8 92 65.2
Zm00001eb227870 Zea mays HOM05D005019 ORTHO05D048639 2.1e-13 81.6 83 55.4
CSS0008724 Camellia sinensis var. sinensis HOM05D006140 ORTHO05D007834 8.5e-07 59.7 54 59.3


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