Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015845 Sechium edule HOM05D006168 ORTHO05D007602 5.9e-71 270.8 140 100.0
ClCG01G014720 Citrullus lanatus HOM05D006168 ORTHO05D007602 5.6e-37 157.9 156 60.3
MELO3C002180.2 Cucumis melo HOM05D006168 ORTHO05D007602 1.3e-36 156.8 153 60.1
Sed0019180 Sechium edule HOM05D006168 ORTHO05D007602 3.1e-35 152.1 155 58.7
CsaV3_1G007610 Cucumis sativus L. HOM05D006168 ORTHO05D007602 1.2e-34 150.2 153 57.5
Gohir.A05G294800 Gossypium hirsutum HOM05D006168 ORTHO05D007602 1.3e-28 130.2 140 54.3
COL.COLO4_12167 Corchorus olitorius HOM05D006168 ORTHO05D007602 3.6e-28 128.6 144 53.5
BolC3t16418H Brassica oleracea HOM05D006168 ORTHO05D007602 6.2e-28 127.9 138 55.8
Duzib114G0883 Durio zibethinus HOM05D006168 ORTHO05D007602 6.2e-28 127.9 140 53.6
Nn3g18550 Nelumbo nucifera HOM05D006168 ORTHO05D007602 1.1e-27 127.1 149 52.3
GSVIVG01024249001 Vitis vinifera HOM05D006168 ORTHO05D007602 1.1e-27 127.1 141 54.6
CiPaw.16G075600 Carya illinoinensis HOM05D006168 ORTHO05D007602 1.4e-27 126.7 140 54.3
Gorai.009G312100 Gossypium raimondii HOM05D006168 ORTHO05D007602 1.8e-27 126.3 135 54.8
Hund08905 Selenicereus undatus HOM05D006168 ORTHO05D007602 1.8e-27 126.3 143 55.2
BraA03t12572Z Brassica rapa HOM05D006168 ORTHO05D007602 2.4e-27 125.9 140 54.3
Aa31LG5G15370 Aethionema arabicum HOM05D006168 ORTHO05D007602 3.1e-27 125.6 140 53.6
Duzib128G1786 Durio zibethinus HOM05D006168 ORTHO05D007602 4.0e-27 125.2 140 52.9
Sabra04G0045100 Salix brachista HOM05D006168 ORTHO05D007602 5.3e-27 124.8 141 53.2
QL10p033704 Quercus lobata HOM05D006168 ORTHO05D007602 6.9e-27 124.4 134 54.5
EL10Ac8g18962 Beta vulgaris HOM05D006168 ORTHO05D007602 9.0e-27 124.0 144 51.4
Thecc.10G078900 Theobroma cacao HOM05D006168 ORTHO05D007602 9.0e-27 124.0 144 52.1
Ah.14g084700 Amaranthus hybridus HOM05D006168 ORTHO05D007602 1.2e-26 123.6 139 55.4
HanXRQChr14g0428251 Helianthus annuus HOM05D006168 ORTHO05D007602 1.2e-26 123.6 131 54.2
Prupe.5G244900 Prunus persica HOM05D006168 ORTHO05D007602 1.5e-26 123.2 150 51.3
AUR62025335 Chenopodium quinoa HOM05D006168 ORTHO05D007602 2.0e-26 122.9 135 55.6
Phvul.L006301 Phaseolus vulgaris HOM05D006168 ORTHO05D007602 2.6e-26 122.5 145 53.1
Potri.004G067300 Populus trichocarpa HOM05D006168 ORTHO05D007602 2.6e-26 122.5 141 51.8
TWI81G0790 Tripterygium wilfordii HOM05D006168 ORTHO05D007602 2.6e-26 122.5 144 52.1
Atru.chr9.17 Acer truncatum HOM05D006168 ORTHO05D007602 4.5e-26 121.7 137 52.6
Cfa017805 Carpinus fangiana HOM05D006168 ORTHO05D007602 4.5e-26 121.7 134 53.7
PGR083G1429 Punica granatum HOM05D006168 ORTHO05D007602 4.5e-26 121.7 149 49.0
VMungo0720G1915 Vigna mungo HOM05D006168 ORTHO05D007602 4.5e-26 121.7 139 53.2
AUR62028326 Chenopodium quinoa HOM05D006168 ORTHO05D007602 5.8e-26 121.3 142 53.5
Glyma.10G174000 Glycine max HOM05D006168 ORTHO05D007602 7.6e-26 120.9 150 52.0
Eucgr.H00657 Eucalyptus grandis HOM05D006168 ORTHO05D007602 2.2e-25 119.4 141 50.4
Glyma.20G216400 Glycine max HOM05D006168 ORTHO05D007602 2.9e-25 119.0 150 51.3
Sp3g03900 Schrenkiella parvula HOM05D006168 ORTHO05D007602 2.9e-25 119.0 137 52.6
AL3G15460 Arabidopsis lyrata HOM05D006168 ORTHO05D007602 3.8e-25 118.6 137 53.3
CARHR079400 Cardamine hirsuta HOM05D006168 ORTHO05D007602 3.8e-25 118.6 138 51.4
Aqoxy2G03978 Aquilegia oxysepala HOM05D006168 ORTHO05D007602 6.4e-25 117.9 138 50.0
PSO063G5228 Papaver somniferum HOM05D006168 ORTHO05D007602 6.4e-25 117.9 135 52.6
Peaxi162Scf00643g00537 Petunia axillaris HOM05D006168 ORTHO05D007602 8.4e-25 117.5 134 52.2
Rhsim12G0137000 Rhododendron simsii HOM05D006168 ORTHO05D007602 1.4e-24 116.7 133 52.6
Lsat_1_v5_gn_2_6441 Lactuca sativa HOM05D006168 ORTHO05D007602 1.9e-24 116.3 142 48.6
Carub.0003s0432 Capsella rubella HOM05D006168 ORTHO05D007602 2.4e-24 115.9 137 52.6
CDE04G1298 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 2.4e-24 115.9 146 48.6
MBI06_g12548_MAGBIO Magnolia biondii HOM05D006168 ORTHO05D007602 2.4e-24 115.9 147 51.0
DCAR_011406 Daucus carota HOM05D006168 ORTHO05D007602 3.2e-24 115.5 137 51.8
ECA238G2000 Erigeron canadensis HOM05D006168 ORTHO05D007602 3.2e-24 115.5 137 49.6
CANSAT35G1332 Cannabis sativa HOM05D006168 ORTHO05D007602 5.5e-24 114.8 128 53.1
ECA238G2968 Erigeron canadensis HOM05D000092 ORTHO05D000042 5.5e-24 114.8 139 49.6
Thhalv10021722m.g Eutrema salsugineum HOM05D006168 ORTHO05D007602 7.1e-24 114.4 137 52.6
THA.LOC104818656 Tarenaya hassleriana HOM05D006168 ORTHO05D007602 9.3e-24 114.0 138 52.9
CDE08G0644 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 1.2e-23 113.6 154 48.7
MD14G1246600 Malus domestica HOM05D006168 ORTHO05D007602 1.2e-23 113.6 144 48.6
Lalb_Chr21g0311691 Lupinus albus HOM05D006168 ORTHO05D007602 1.6e-23 113.2 142 50.7
AT3G05070 Arabidopsis thaliana HOM05D006168 ORTHO05D007602 2.1e-23 112.8 137 51.1
ECA238G0114 Erigeron canadensis HOM05D006168 ORTHO05D007602 2.1e-23 112.8 133 49.6
ECA238G1897 Erigeron canadensis HOM05D006168 ORTHO05D007602 2.1e-23 112.8 133 49.6
A05p42500 Brassica napus HOM05D006168 ORTHO05D007602 2.7e-23 112.5 144 48.6
Solyc06g072170.2 Solanum lycopersicum HOM05D006168 ORTHO05D007602 2.7e-23 112.5 143 49.0
Sopen06g028470 Solanum pennellii HOM05D006168 ORTHO05D007602 2.7e-23 112.5 143 49.0
Ca_09928_v3 Cicer arietinum L. HOM05D006168 ORTHO05D007602 6.0e-23 111.3 167 45.5
Medtr1g077570 Medicago truncatula HOM05D006168 ORTHO05D007602 6.0e-23 111.3 168 45.2
PGSC0003DMG400027059 Solanum tuberosum HOM05D006168 ORTHO05D007602 7.9e-23 110.9 143 48.3
BraA05t23002Z Brassica rapa HOM05D006168 ORTHO05D007602 1.3e-22 110.2 140 49.3
RcHm_v2.0_Chr7g0176961 Rosa chinensis HOM05D006168 ORTHO05D007602 1.8e-22 109.8 147 48.3
Gohir.D05G295400 Gossypium hirsutum HOM05D006168 ORTHO05D007602 3.0e-22 109.0 75 73.3
Manes.02G226600 Manihot esculenta HOM05D006168 ORTHO05D007602 3.0e-22 109.0 75 74.7
C05p62160 Brassica napus HOM05D006168 ORTHO05D007602 3.9e-22 108.6 139 48.9
BolC5t34874H Brassica oleracea HOM05D006168 ORTHO05D007602 3.9e-22 108.6 139 48.9
CSS0046866 Camellia sinensis var. sinensis HOM05D006168 ORTHO05D007602 3.9e-22 108.6 79 72.2
Cc02_g29290 Coffea canephora HOM05D006168 ORTHO05D007602 6.7e-22 107.8 160 45.0
Migut.D02066 Erythranthe guttata HOM05D006168 ORTHO05D007602 1.1e-21 107.1 154 44.8
MD06G1240400 Malus domestica HOM05D006168 ORTHO05D007602 1.1e-21 107.1 158 44.9
TAR629G1867 Trochodendron aralioides HOM05D006168 ORTHO05D007602 1.5e-21 106.7 145 47.6
MSTRG.4316 Avicennia marina HOM05D006168 ORTHO05D007602 5.6e-21 104.8 168 43.5
Haze_18408 Corylus avellana HOM05D006168 ORTHO05D007602 5.6e-21 104.8 67 79.1
Lj5g0014337 Lotus japonicus HOM05D006168 ORTHO05D007602 7.4e-21 104.4 85 68.2
BcaB04g19282 Brassica carinata HOM05D006168 ORTHO05D007602 9.6e-21 104.0 81 70.4
ATR0124G011 Amborella trichopoda HOM05D006168 ORTHO05D007602 1.3e-20 103.6 151 43.7
Dinv03501 Davidia involucrata HOM05D006168 ORTHO05D007602 2.1e-20 102.8 80 68.8
Dinv03506 Davidia involucrata HOM05D006168 ORTHO05D007602 2.1e-20 102.8 80 68.8
Psat6g054520 Pisum sativum HOM05D006168 ORTHO05D007602 4.8e-20 101.7 150 45.3
SalBow8G4549 Salvia bowleyana HOM05D006168 ORTHO05D007602 8.1e-20 100.9 126 50.8
HPP92_020852 Vanilla planifolia HOM05D006168 ORTHO05D007602 8.1e-20 100.9 78 70.5
Ciclev10022597m.g Citrus clementina HOM05D006168 ORTHO05D007602 1.8e-19 99.8 75 68.0
unitig_21.g20432 Utricularia gibba HOM05D006168 ORTHO05D007602 2.4e-19 99.4 156 44.9
BcaC05g29992 Brassica carinata HOM05D006168 ORTHO05D007602 3.1e-19 99.0 139 44.6
FAN04G0186 Fragaria x ananassa HOM05D006168 ORTHO05D007602 3.1e-19 99.0 150 44.0
CAN.G65.65 Capsicum annuum HOM05D006168 ORTHO05D007602 4.0e-19 98.6 86 62.8
FvH4_5g18550 Fragaria vesca HOM05D006168 ORTHO05D007602 4.0e-19 98.6 151 43.7
FAN18G0639 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.0e-19 98.6 151 43.7
vmacro16399 Vaccinium macrocarpon HOM05D006168 ORTHO05D007602 4.0e-19 98.6 169 40.2
FAN08G3581 Fragaria x ananassa HOM05D006168 ORTHO05D007602 9.0e-19 97.4 150 43.3
SEGI_05677 Sequoiadendron giganteum HOM05D006168 ORTHO05D007602 1.5e-18 96.7 143 43.4
SGA_v2.0_scaffold387G50509 Striga asiatica HOM05D006168 ORTHO05D007602 4.5e-18 95.1 157 41.4
Oeu034422.1 Olea europaea HOM05D006168 ORTHO05D007602 1.0e-17 94.0 136 44.9
Pp3c19_22150 Physcomitrium patens HOM05D006168 ORTHO05D007602 1.7e-17 93.2 72 66.7
Nitab4.5_0000477g0160 Nicotiana tabacum HOM05D006168 ORTHO05D007602 8.4e-17 90.9 70 68.6
Nitab4.5_0002771g0020 Nicotiana tabacum HOM05D006168 ORTHO05D007602 1.9e-16 89.7 68 69.1
Zm00001eb228960 Zea mays HOM05D006168 ORTHO05D007602 1.9e-16 89.7 79 58.2
Os06g0730800 Oryza sativa ssp. japonica HOM05D006168 ORTHO05D007602 7.9e-15 84.3 76 57.9
Cre12.g518300 Chlamydomonas reinhardtii HOM05D006168 ORTHO05D007602 6.7e-14 81.3 119 48.7
BcaC01g04336 Brassica carinata HOM05D006168 ORTHO05D007602 1.5e-13 80.1 90 53.3
Mapoly0133s0024 Marchantia polymorpha HOM05D006168 ORTHO05D007602 1.3e-12 77.0 68 58.8
AagrBONN_evm.TU.Sc2ySwM_368.389 Anthoceros agrestis HOM05D006168 ORTHO05D007602 2.1e-12 76.3 72 59.7
TPR.G8871 Trifolium pratense HOM05D006168 ORTHO05D007602 2.1e-12 76.3 55 70.9
arahy.Tifrunner.gnm1.ann1.52MA05 Arachis hypogaea HOM05D006168 ORTHO05D007602 2.8e-12 75.9 125 44.0
RcHm_v2.0_Chr5g0006211 Rosa chinensis HOM05D006168 ORTHO05D007602 2.8e-12 75.9 138 37.7
SMO147G0110 Selaginella moellendorffii HOM05D006168 ORTHO05D007602 6.3e-12 74.7 109 45.0
FAN25G2877 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.2e-10 70.5 147 34.0
Potri.017G154100 Populus trichocarpa HOM05D006168 ORTHO05D007602 5.9e-10 68.2 77 54.5
CBR_g57849 Chara braunii HOM05D006168 ORTHO05D007602 1.0e-09 67.4 79 48.1
FAN21G2556 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.0e-09 67.4 147 33.3
FvH4_3g03920 Fragaria vesca HOM05D006168 ORTHO05D007602 2.2e-09 66.2 142 34.5
FAN11G1802 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.9e-09 65.9 142 34.5
FAN16G2203 Fragaria x ananassa HOM05D006168 ORTHO05D007602 5.0e-09 65.1 153 34.0


User provided reference genes

Program Settings