Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015774 Sechium edule HOM05D008235 ORTHO05D009358 1.3e-213 746.1 374 100.0
ClCG07G015680 Citrullus lanatus HOM05D008235 ORTHO05D009358 7.5e-137 491.1 386 68.4
MELO3C017713.2 Cucumis melo HOM05D008235 ORTHO05D009358 7.2e-132 474.6 389 66.3
CsaV3_4G003430 Cucumis sativus L. HOM05D008235 ORTHO05D009358 1.8e-130 469.9 389 65.6
QL10p049494 Quercus lobata HOM05D008235 ORTHO05D009358 8.8e-45 185.3 410 37.6
Haze_01504 Corylus avellana HOM05D008235 ORTHO05D009358 2.8e-43 180.3 415 35.4
CANSAT78G2326 Cannabis sativa HOM05D008235 ORTHO05D009358 5.3e-34 149.4 411 33.1
MD04G1040900 Malus domestica HOM05D008235 ORTHO05D009358 9.1e-34 148.7 411 33.1
CiPaw.01G099800 Carya illinoinensis HOM05D008235 ORTHO05D009358 7.2e-31 139.0 325 36.3
Potri.017G029800 Populus trichocarpa HOM05D008235 ORTHO05D009358 3.0e-29 133.7 397 30.7
Dinv22732 Davidia involucrata HOM05D008235 ORTHO05D009358 2.8e-27 127.1 290 34.1
Phvul.011G054200 Phaseolus vulgaris HOM05D008235 ORTHO05D009358 1.6e-25 121.3 407 28.0
Sabra17G0019200 Salix brachista HOM05D008235 ORTHO05D009358 3.5e-25 120.2 289 31.1
Duzib212G0859 Durio zibethinus HOM05D008235 ORTHO05D009358 1.0e-24 118.6 401 29.7
Lalb_Chr22g0352131 Lupinus albus HOM05D008235 ORTHO05D009358 1.3e-24 118.2 395 29.9
Glyma.12G052200 Glycine max HOM05D008235 ORTHO05D009358 1.7e-24 117.9 396 28.0
Duzib268G0443 Durio zibethinus HOM05D008235 ORTHO05D009358 2.2e-24 117.5 278 33.5
Potri.007G128500 Populus trichocarpa HOM05D008235 ORTHO05D009358 2.2e-24 117.5 374 31.8
VMungo1127G1046 Vigna mungo HOM05D008235 ORTHO05D009358 2.2e-24 117.5 406 27.3
Ca_20789_v3 Cicer arietinum L. HOM05D008235 ORTHO05D009358 1.5e-23 114.8 384 27.9
arahy.Tifrunner.gnm1.ann1.TK6P88 Arachis hypogaea HOM05D008235 ORTHO05D009358 1.9e-23 114.4 403 29.3
arahy.Tifrunner.gnm1.ann1.V6VI7P Arachis hypogaea HOM05D008235 ORTHO05D009358 1.9e-23 114.4 401 29.7
Thecc.04G179500 Theobroma cacao HOM05D008235 ORTHO05D009358 1.9e-23 114.4 414 28.7
Lj3g0014084 Lotus japonicus HOM05D008235 ORTHO05D009358 2.5e-23 114.0 404 29.5
CSS0022265 Camellia sinensis var. sinensis HOM05D008235 ORTHO05D009358 5.5e-23 112.8 395 30.6
Sabra07G0105000 Salix brachista HOM05D008235 ORTHO05D009358 4.7e-22 109.8 269 33.5
Manes.04G042909 Manihot esculenta HOM05D008235 ORTHO05D009358 1.0e-21 108.6 411 30.9
Ciclev10019428m.g Citrus clementina HOM05D008235 ORTHO05D009358 5.2e-21 106.3 373 28.7
Actinidia35979 Actinidia chinensis HOM05D008235 ORTHO05D009358 5.7e-20 102.8 407 29.2
TAR365G0029 Trochodendron aralioides HOM05D008235 ORTHO05D009358 7.5e-20 102.4 427 28.3
CSS0049607 Camellia sinensis var. sinensis HOM05D008235 ORTHO05D009358 2.8e-19 100.5 300 31.0
Glyma.11G127600 Glycine max HOM05D008235 ORTHO05D009358 3.7e-19 100.1 376 26.1
Gohir.D10G129000 Gossypium hirsutum HOM05D008235 ORTHO05D009358 6.3e-19 99.4 258 29.8
Gorai.011G142400 Gossypium raimondii HOM05D008235 ORTHO05D009358 6.3e-19 99.4 258 29.8
Manes.11G121000 Manihot esculenta HOM05D008235 ORTHO05D009358 8.3e-19 99.0 379 30.6
Actinidia34601 Actinidia chinensis HOM05D008235 ORTHO05D009358 1.1e-18 98.6 404 28.0
Gohir.A10G137600 Gossypium hirsutum HOM05D008235 ORTHO05D009358 1.4e-18 98.2 284 28.2
COL.COLO4_07668 Corchorus olitorius HOM05D008235 ORTHO05D009358 4.1e-18 96.7 280 31.4
TAR636G0036 Trochodendron aralioides HOM05D008235 ORTHO05D009358 4.1e-18 96.7 316 29.4
Glyma.13G344300 Glycine max HOM05D008235 ORTHO05D009358 7.0e-18 95.9 272 27.6
Dinv44188 Davidia involucrata HOM05D008235 ORTHO05D009358 7.7e-17 92.4 396 26.8
Gorai.005G128900 Gossypium raimondii HOM05D008235 ORTHO05D009358 2.3e-16 90.9 372 29.6
Gohir.A03G088800 Gossypium hirsutum HOM05D008235 ORTHO05D009358 8.6e-16 89.0 384 28.1
Gohir.D02G114100 Gossypium hirsutum HOM05D008235 ORTHO05D009358 1.5e-15 88.2 381 28.9
vmacro00622 Vaccinium macrocarpon HOM05D008235 ORTHO05D009358 2.3e-13 80.9 296 29.7
GSVIVG01010760001 Vitis vinifera HOM05D008235 ORTHO05D009358 2.0e-12 77.8 274 32.1
Nn1g09629 Nelumbo nucifera HOM05D008235 ORTHO05D009358 2.2e-11 74.3 443 27.3
Rhsim09G0027400 Rhododendron simsii HOM05D008235 ORTHO05D009358 8.3e-11 72.4 287 29.3
RhsimUnG0195000 Rhododendron simsii HOM05D008235 ORTHO05D009358 8.3e-11 72.4 287 29.3
Eucgr.A00083 Eucalyptus grandis HOM05D008235 ORTHO05D009358 1.6e-09 68.2 266 28.6
Cc03_g12910 Coffea canephora HOM05D008235 ORTHO05D009358 5.9e-09 66.2 390 24.9
THA.LOC104800392 Tarenaya hassleriana HOM05D009929 ORTHO05D009358 2.9e-08 63.9 252 26.6
Psat7g208600 Pisum sativum HOM05D008235 ORTHO05D009358 6.6e-08 62.8 80 40.0
Medtr4g067260 Medicago truncatula HOM05D008235 ORTHO05D009358 2.5e-07 60.8 411 25.8
TPR.G34237 Trifolium pratense HOM05D008235 ORTHO05D009358 3.6e-06 57.0 374 25.1
Ah.13g072860 Amaranthus hybridus HOM05D019141 ORTHO05D009358 4.7e-06 56.6 298 26.8
ATR0824G133 Amborella trichopoda HOM05D008235 ORTHO05D009358 4.7e-06 56.6 68 39.7
AUR62002309 Chenopodium quinoa HOM05D019141 ORTHO05D009358 8.0e-06 55.8 326 26.7


User provided reference genes

Program Settings