Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015743 Sechium edule HOM05D006911 ORTHO05D006663 7.6e-46 186.8 94 100.0
Sed0000672 Sechium edule HOM05D006911 ORTHO05D006663 9.9e-30 133.3 86 82.6
ClCG03G007000 Citrullus lanatus HOM05D006911 ORTHO05D006663 2.9e-29 131.7 86 81.4
Thecc.06G153400 Theobroma cacao HOM05D006911 ORTHO05D006663 7.7e-14 80.5 68 58.8
QL05p059038 Quercus lobata HOM05D006911 ORTHO05D006663 1.0e-13 80.1 68 60.3
Ciclev10017350m.g Citrus clementina HOM05D006911 ORTHO05D006663 3.8e-13 78.2 73 61.6
COL.COLO4_38300 Corchorus olitorius HOM05D006911 ORTHO05D006663 5.0e-13 77.8 77 55.8
Gohir.A10G039300 Gossypium hirsutum HOM05D006911 ORTHO05D006663 1.9e-12 75.9 70 55.7
Gohir.A06G197500 Gossypium hirsutum HOM05D006911 ORTHO05D006663 2.5e-12 75.5 68 61.8
Gohir.D05G152400 Gossypium hirsutum HOM05D006911 ORTHO05D006663 2.5e-12 75.5 77 51.9
Gorai.010G239100 Gossypium raimondii HOM05D006911 ORTHO05D006663 2.5e-12 75.5 68 63.2
Gohir.A05G149800 Gossypium hirsutum HOM05D006911 ORTHO05D006663 3.2e-12 75.1 68 54.4
Gohir.D10G040100 Gossypium hirsutum HOM05D006911 ORTHO05D006663 4.2e-12 74.7 70 55.7
Gorai.011G042200 Gossypium raimondii HOM05D006911 ORTHO05D006663 4.2e-12 74.7 70 55.7
Gohir.D06G205000 Gossypium hirsutum HOM05D006911 ORTHO05D006663 5.5e-12 74.3 68 61.8
PGR083G1670 Punica granatum HOM05D006911 ORTHO05D006663 5.5e-12 74.3 69 58.0
Potri.004G131200 Populus trichocarpa HOM05D006911 ORTHO05D006663 1.2e-11 73.2 85 51.8
TWI09G0032 Tripterygium wilfordii HOM05D006911 ORTHO05D006663 1.6e-11 72.8 83 48.2
Lj4g0007682 Lotus japonicus HOM05D006911 ORTHO05D006663 2.1e-11 72.4 76 56.6
COL.COLO4_24713 Corchorus olitorius HOM05D006911 ORTHO05D006663 3.6e-11 71.6 78 50.0
Potri.011G079900 Populus trichocarpa HOM05D006911 ORTHO05D006663 4.6e-11 71.2 72 55.6
Manes.15G119700 Manihot esculenta HOM05D006911 ORTHO05D006663 1.4e-10 69.7 50 72.0
RcHm_v2.0_Chr7g0229651 Rosa chinensis HOM05D006911 ORTHO05D006663 1.8e-10 69.3 70 57.1
RcHm_v2.0_Chr5g0013541 Rosa chinensis HOM05D006911 ORTHO05D006663 3.0e-10 68.6 70 55.7
Glyma.08G083800 Glycine max HOM05D006911 ORTHO05D006663 3.9e-10 68.2 62 56.5
Manes.17G067900 Manihot esculenta HOM05D006911 ORTHO05D006663 5.1e-10 67.8 50 70.0
CiPaw.09G126200 Carya illinoinensis HOM05D006911 ORTHO05D006663 1.1e-09 66.6 74 54.1
Gorai.009G156500 Gossypium raimondii HOM05D006911 ORTHO05D006663 1.1e-09 66.6 64 53.1
MD05G1287000 Malus domestica HOM05D006911 ORTHO05D006663 1.1e-09 66.6 69 56.5
FAN21G0769 Fragaria x ananassa HOM05D006911 ORTHO05D006663 1.5e-09 66.2 70 54.3
Lalb_Chr07g0188701 Lupinus albus HOM05D006911 ORTHO05D006663 2.5e-09 65.5 83 47.0
Medtr5g091310 Medicago truncatula HOM05D006911 ORTHO05D006663 5.7e-09 64.3 48 64.6
TPR.G4919 Trifolium pratense HOM05D006911 ORTHO05D006663 1.3e-08 63.2 68 52.9
FvH4_3g05900 Fragaria vesca HOM05D006911 ORTHO05D006663 2.8e-08 62.0 66 54.5
Medtr4g094635 Medicago truncatula HOM05D006911 ORTHO05D006663 2.8e-08 62.0 72 51.4
SalBow6G3836 Salvia bowleyana HOM05D006911 ORTHO05D006663 2.8e-08 62.0 91 48.4
Prupe.4G077900 Prunus persica HOM05D006911 ORTHO05D006663 3.7e-08 61.6 69 53.6
Glyma.05G129200 Glycine max HOM05D006911 ORTHO05D006663 8.2e-08 60.5 74 47.3
Medtr4g094630 Medicago truncatula HOM05D006911 ORTHO05D006663 8.2e-08 60.5 65 52.3
SalBow7G2931 Salvia bowleyana HOM05D006911 ORTHO05D006663 1.1e-07 60.1 91 47.3
Nn4g26517 Nelumbo nucifera HOM05D006911 ORTHO05D006663 4.1e-07 58.2 68 50.0
Oeu052383.1 Olea europaea HOM05D006911 ORTHO05D006663 4.1e-07 58.2 92 42.4
MBI10_g27413_MAGBIO Magnolia biondii HOM05D006911 ORTHO05D006663 5.3e-07 57.8 48 60.4
Nn3g20669 Nelumbo nucifera HOM05D006911 ORTHO05D006663 5.3e-07 57.8 77 44.2
Migut.M00927 Erythranthe guttata HOM05D006911 ORTHO05D006663 6.9e-07 57.4 92 42.4
CiPaw.04G139200 Carya illinoinensis HOM05D006911 ORTHO05D006663 2.0e-06 55.8 70 47.1
RcHm_v2.0_Chr2g0151771 Rosa chinensis HOM05D006911 ORTHO05D006663 2.0e-06 55.8 88 44.3
Lalb_Chr04g0248851 Lupinus albus HOM05D006911 ORTHO05D006663 2.6e-06 55.5 62 48.4
CSS0014266 Camellia sinensis var. sinensis HOM05D006911 ORTHO05D006663 4.5e-06 54.7 51 60.8
CSS0033096 Camellia sinensis var. sinensis HOM05D006911 ORTHO05D006663 4.5e-06 54.7 51 60.8
Migut.H01374 Erythranthe guttata HOM05D006911 ORTHO05D006663 4.5e-06 54.7 92 40.2
Oeu040961.1 Olea europaea HOM05D006911 ORTHO05D006663 4.5e-06 54.7 38 68.4
Cc09_g08880 Coffea canephora HOM05D006911 ORTHO05D006663 5.9e-06 54.3 52 57.7
COL.COLO4_07174 Corchorus olitorius HOM05D006911 ORTHO05D006663 5.9e-06 54.3 68 45.6


User provided reference genes

Program Settings