Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015724 Sechium edule HOM05D000358 ORTHO05D009346 8.3e-91 337.0 171 100.0
CsaV3_6G037210 Cucumis sativus L. HOM05D000358 ORTHO05D009346 5.2e-61 238.0 175 72.6
Dinv32921 Davidia involucrata HOM05D000358 ORTHO05D002525 2.4e-50 202.6 165 63.6
TAR636G2394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 2.7e-49 199.1 174 63.2
TAR375G0394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 4.6e-49 198.4 174 62.6
FvH4_2g23371 Fragaria vesca HOM05D000358 ORTHO05D009346 6.0e-49 198.0 154 63.6
RcHm_v2.0_Chr6g0290831 Rosa chinensis HOM05D000358 ORTHO05D009346 6.0e-49 198.0 174 60.9
Manes.05G077400 Manihot esculenta HOM05D000358 ORTHO05D009346 7.3e-47 191.0 174 59.8
Ciclev10022514m.g Citrus clementina HOM05D000358 ORTHO05D009346 9.6e-47 190.7 179 56.4
Sabra05G0160900 Salix brachista HOM05D000358 ORTHO05D009346 9.6e-47 190.7 167 58.7
CSS0040373 Camellia sinensis var. sinensis HOM05D000358 ORTHO05D009346 2.1e-46 189.5 170 58.8
CANSAT25G1780 Cannabis sativa HOM05D000358 ORTHO05D009346 2.8e-46 189.1 155 65.2
MBI04_g20822_MAGBIO Magnolia biondii HOM05D000358 ORTHO05D009346 3.6e-46 188.7 173 56.6
Prupe.8G239600 Prunus persica HOM05D000358 ORTHO05D009346 6.2e-46 188.0 174 59.2
Atru.chr5.1460 Acer truncatum HOM05D000358 ORTHO05D009346 1.4e-45 186.8 162 57.4
Aqoxy2G03373 Aquilegia oxysepala HOM05D000358 ORTHO05D009346 1.8e-45 186.4 172 58.7
GSVIVG01001163001 Vitis vinifera HOM05D000358 ORTHO05D009346 3.1e-45 185.7 154 62.3
MD11G1284000 Malus domestica HOM05D000358 ORTHO05D009346 4.0e-45 185.3 166 60.8
Potri.005G210700 Populus trichocarpa HOM05D000358 ORTHO05D009346 1.2e-44 183.7 158 60.1
CiPaw.07G090600 Carya illinoinensis HOM05D000358 ORTHO05D009346 7.6e-44 181.0 169 60.4
Lj1A47T39 Lonicera japonica HOM05D000358 ORTHO05D009346 1.3e-43 180.3 169 56.8
TWI14G1410 Tripterygium wilfordii HOM05D000358 ORTHO05D009346 1.3e-43 180.3 173 56.1
Glyma.03G155200 Glycine max HOM05D000358 ORTHO05D009346 3.8e-43 178.7 153 58.8
Cpa.g.sc52.51 Carica papaya HOM05D000358 ORTHO05D009346 6.4e-43 177.9 155 58.7
Duzib133G0337 Durio zibethinus HOM05D000358 ORTHO05D009346 6.4e-43 177.9 172 56.4
Rhsim13G0026100 Rhododendron simsii HOM05D000358 ORTHO05D009346 8.4e-43 177.6 106 77.4
Hund09500 Selenicereus undatus HOM05D000358 ORTHO05D009346 1.9e-42 176.4 174 54.0
Thecc.01G276900 Theobroma cacao HOM05D000358 ORTHO05D009346 1.9e-42 176.4 174 55.2
Nitab4.5_0004318g0030 Nicotiana tabacum HOM05D000358 ORTHO05D009346 3.2e-42 175.6 173 53.8
Gorai.007G137700 Gossypium raimondii HOM05D000358 ORTHO05D009346 2.7e-41 172.6 161 55.9
Nitab4.5_0005971g0010 Nicotiana tabacum HOM05D000358 ORTHO05D009346 2.7e-41 172.6 172 53.5
HanXRQChr15g0466741 Helianthus annuus HOM05D000358 ORTHO05D009346 3.5e-41 172.2 114 71.1
Peaxi162Scf00641g00315 Petunia axillaris HOM05D000358 ORTHO05D009346 3.5e-41 172.2 142 58.5
Gohir.D11G128700 Gossypium hirsutum HOM05D000358 ORTHO05D009346 6.0e-41 171.4 148 59.5
PGR044G2401 Punica granatum HOM05D000358 ORTHO05D009346 7.8e-41 171.0 119 68.1
PSO761G0166 Papaver somniferum HOM05D000358 ORTHO05D009346 1.7e-40 169.9 163 54.0
MSTRG.12558 Avicennia marina HOM05D000358 ORTHO05D009346 2.3e-40 169.5 119 67.2
Sopen09g027050 Solanum pennellii HOM05D000358 ORTHO05D009346 2.3e-40 169.5 174 54.0
Gohir.A11G123500 Gossypium hirsutum HOM05D000358 ORTHO05D009346 3.0e-40 169.1 172 54.7
Phvul.001G152500 Phaseolus vulgaris HOM05D000358 ORTHO05D009346 3.0e-40 169.1 165 54.5
Actinidia09124 Actinidia chinensis HOM05D000358 ORTHO05D009346 3.9e-40 168.7 106 71.7
Eucgr.K03368 Eucalyptus grandis HOM05D000358 ORTHO05D009346 3.9e-40 168.7 173 54.9
Lj1g0011093 Lotus japonicus HOM05D000358 ORTHO05D009346 3.9e-40 168.7 176 51.7
arahy.Tifrunner.gnm1.ann1.1D6AAZ Arachis hypogaea HOM05D000358 ORTHO05D009346 5.1e-40 168.3 122 65.6
arahy.Tifrunner.gnm1.ann1.M7C8NM Arachis hypogaea HOM05D000358 ORTHO05D009346 5.1e-40 168.3 122 65.6
Lsat_1_v5_gn_9_3480 Lactuca sativa HOM05D000358 ORTHO05D009346 6.6e-40 167.9 166 53.6
Medtr7g095090 Medicago truncatula HOM05D000358 ORTHO05D009346 6.6e-40 167.9 168 57.1
ECA247G2961 Erigeron canadensis HOM05D000358 ORTHO05D009346 8.7e-40 167.5 157 53.5
ClCG07G000330 Citrullus lanatus HOM05D000358 ORTHO05D009346 1.1e-39 167.2 153 63.4
AUR62028609 Chenopodium quinoa HOM05D000358 ORTHO05D009346 1.9e-39 166.4 171 52.6
TPR.G35683 Trifolium pratense HOM05D000358 ORTHO05D009346 1.9e-39 166.4 128 67.2
Zm00001eb054110 Zea mays HOM05D000358 ORTHO05D009346 1.9e-39 166.4 112 67.0
PSO210G0760 Papaver somniferum HOM05D000358 ORTHO05D009346 2.5e-39 166.0 163 52.8
Cc01_g19380 Coffea canephora HOM05D000358 ORTHO05D009346 3.3e-39 165.6 106 70.8
EL10Ac5g10557 Beta vulgaris HOM05D000358 ORTHO05D009346 5.6e-39 164.9 179 52.0
Migut.N02045 Erythranthe guttata HOM05D000358 ORTHO05D009346 9.6e-39 164.1 146 56.8
SalBow6G4489 Salvia bowleyana HOM05D000358 ORTHO05D009346 1.3e-38 163.7 152 55.3
SGA_v2.0_scaffold81G26022 Striga asiatica HOM05D000358 ORTHO05D009346 2.1e-38 162.9 137 60.6
Carub.0006s3438 Capsella rubella HOM05D000358 ORTHO05D009346 1.1e-37 160.6 111 65.8
THA.LOC104801239 Tarenaya hassleriana HOM05D000358 ORTHO05D009346 1.1e-37 160.6 126 58.7
Sp6g02670 Schrenkiella parvula HOM05D000358 ORTHO05D009346 1.8e-37 159.8 115 62.6
CARHR251060 Cardamine hirsuta HOM05D000358 ORTHO05D009346 2.4e-37 159.5 111 64.0
A09p02150 Brassica napus HOM05D000358 ORTHO05D009346 3.1e-37 159.1 107 64.5
BraA09t35864Z Brassica rapa HOM05D000358 ORTHO05D009346 4.0e-37 158.7 109 63.3
AL6G50280 Arabidopsis lyrata HOM05D000358 ORTHO05D009346 1.2e-36 157.1 149 53.7
BcaC04g24011 Brassica carinata HOM05D000358 ORTHO05D009346 1.2e-36 157.1 109 63.3
HPP92_009591 Vanilla planifolia HOM05D002842 ORTHO05D003177 1.2e-36 157.1 160 51.2
Solyc09g065300.4 Solanum lycopersicum HOM05D000358 ORTHO05D009346 1.5e-36 156.8 173 53.2
AT4G02725 Arabidopsis thaliana HOM05D000358 ORTHO05D009346 2.0e-36 156.4 105 65.7
BolC9t53153H Brassica oleracea HOM05D000358 ORTHO05D009346 2.6e-36 156.0 109 63.3
Thhalv10029025m.g Eutrema salsugineum HOM05D000358 ORTHO05D009346 4.4e-36 155.2 111 62.2
COL.COLO4_09074 Corchorus olitorius HOM05D000358 ORTHO05D009346 9.9e-36 154.1 187 50.3
BcaB05g23661 Brassica carinata HOM05D000358 ORTHO05D009346 1.3e-35 153.7 173 48.0
BcaC03g16171 Brassica carinata HOM05D000358 ORTHO05D009346 1.1e-34 150.6 165 47.3
A02p24950 Brassica napus HOM05D000358 ORTHO05D009346 1.1e-34 150.6 165 47.3
C02p39090 Brassica napus HOM05D000358 ORTHO05D009346 1.1e-34 150.6 165 47.3
BolC2t09919H Brassica oleracea HOM05D000358 ORTHO05D009346 1.1e-34 150.6 165 47.3
BraA02t07485Z Brassica rapa HOM05D000358 ORTHO05D009346 1.1e-34 150.6 165 47.3
Os03g0701300 Oryza sativa ssp. japonica HOM05D000358 ORTHO05D009346 5.4e-34 148.3 100 67.0
Aa31LG5G2370 Aethionema arabicum HOM05D000358 ORTHO05D009346 6.0e-33 144.8 98 66.3
vmacro02584 Vaccinium macrocarpon HOM05D000358 ORTHO05D009346 6.0e-33 144.8 134 57.5
CDE02G2742 Ceratophyllum demersum HOM05D006420 ORTHO05D008009 1.0e-32 144.1 97 69.1
Lalb_Chr01g0020121 Lupinus albus HOM05D000358 ORTHO05D009346 3.9e-32 142.1 99 66.7
C09p02250 Brassica napus HOM05D000358 ORTHO05D009346 8.7e-32 141.0 172 44.8
Hma1.2p1_0822F.1_g224410 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 8.7e-32 141.0 95 72.6
Mapoly0004s0031 Marchantia polymorpha HOM05D000358 ORTHO05D009346 5.6e-31 138.3 136 52.9
Pp3c26_14500 Physcomitrium patens HOM05D000358 ORTHO05D009346 7.3e-31 137.9 110 55.5
PGSC0003DMG400019331 Solanum tuberosum HOM05D000358 ORTHO05D009346 7.3e-31 137.9 146 54.1
VMungo1383G1528 Vigna mungo HOM05D000358 ORTHO05D009346 7.3e-31 137.9 177 46.9
Hma1.2p1_0822F.1_g224420 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 1.6e-30 136.7 88 73.9
SMO340G0322 Selaginella moellendorffii HOM05D000104 ORTHO05D004059 2.1e-30 136.3 120 54.2
SMO180G0003 Selaginella moellendorffii HOM05D000358 ORTHO05D009346 3.1e-29 132.5 94 63.8
Sc17g0001440 Simmondsia chinensis HOM05D000358 ORTHO05D009346 9.0e-29 131.0 140 51.4
ATR0332G065 Amborella trichopoda HOM05D000358 ORTHO05D009346 1.1e-26 124.0 127 49.6
Psat3g063840 Pisum sativum HOM05D000358 ORTHO05D009346 1.9e-26 123.2 92 65.2
Atru.BG.13.p Acer truncatum HOM05D000358 ORTHO05D009346 7.1e-26 121.3 103 58.3
Haze_04693 Corylus avellana HOM05D000358 ORTHO05D009346 7.1e-26 121.3 147 49.7
MELO3C014393.2 Cucumis melo HOM05D000358 ORTHO05D009346 1.3e-24 117.1 93 69.9
AagrBONN_evm.TU.Sc2ySwM_362.2722 Anthoceros agrestis HOM05D000358 ORTHO05D009346 2.8e-22 109.4 76 61.8
unitig_899.g15068 Utricularia gibba HOM05D000454 ORTHO05D000591 2.6e-20 102.8 71 64.8
Eucgr.L00778 Eucalyptus grandis HOM05D000358 ORTHO05D009346 5.8e-20 101.7 74 63.5
Eucgr.C01960 Eucalyptus grandis HOM05D000358 ORTHO05D009346 5.3e-13 78.6 63 58.7
QL12p021343 Quercus lobata HOM05D000358 ORTHO05D009346 6.9e-13 78.2 103 51.5
Ah.11g050550 Amaranthus hybridus HOM05D000358 ORTHO05D009346 1.2e-12 77.4 160 36.2
FAN20G1711 Fragaria x ananassa HOM05D000358 ORTHO05D009346 1.5e-12 77.0 154 35.1
Nn1g02275 Nelumbo nucifera HOM05D000358 ORTHO05D009346 1.3e-11 73.9 101 49.5
Oeu029468.1 Olea europaea HOM05D000358 ORTHO05D009346 2.3e-08 63.2 100 42.0


User provided reference genes

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