Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015656 Sechium edule HOM05D005518 ORTHO05D001269 0.0e+00 1103.2 583 100.0
ClCG03G003580 Citrullus lanatus HOM05D005518 ORTHO05D001269 1.1e-238 830.1 618 74.8
CsaV3_1G009430 Cucumis sativus L. HOM05D005518 ORTHO05D001269 6.2e-231 804.3 586 75.4
Sed0017473 Sechium edule HOM05D005518 ORTHO05D001269 8.1e-223 777.3 586 75.4
MELO3C002344.2 Cucumis melo HOM05D005518 ORTHO05D001269 1.1e-219 766.9 583 72.4
RcHm_v2.0_Chr7g0190821 Rosa chinensis HOM05D005518 ORTHO05D001269 1.3e-140 504.2 595 55.1
Prupe.5G155700 Prunus persica HOM05D005518 ORTHO05D001269 6.6e-140 501.9 595 55.1
CiPaw.12G036400 Carya illinoinensis HOM05D005518 ORTHO05D001269 3.1e-137 493.0 591 54.7
FAN13G1318 Fragaria x ananassa HOM05D005518 ORTHO05D001269 1.7e-135 487.3 595 53.4
FAN04G1413 Fragaria x ananassa HOM05D005518 ORTHO05D001269 3.5e-133 479.6 595 52.9
Sabra12G0068800 Salix brachista HOM05D005518 ORTHO05D001269 6.6e-132 475.3 597 51.8
FvH4_5g07650 Fragaria vesca HOM05D005518 ORTHO05D001269 1.5e-131 474.2 595 52.6
FAN08G0706 Fragaria x ananassa HOM05D005518 ORTHO05D001269 2.5e-131 473.4 592 52.7
RcHm_v2.0_Chr1g0380401 Rosa chinensis HOM05D005518 ORTHO05D001269 9.6e-131 471.5 596 52.7
Cpa.g.sc4.97 Carica papaya HOM05D005518 ORTHO05D001269 3.1e-129 466.5 599 53.1
FAN25G1054 Fragaria x ananassa HOM05D005518 ORTHO05D001269 5.2e-129 465.7 587 52.6
Thecc.03G124400 Theobroma cacao HOM05D005518 ORTHO05D001269 2.9e-127 459.9 595 51.3
CANSAT80G2082 Cannabis sativa HOM05D005518 ORTHO05D001269 2.4e-126 456.8 600 52.3
CiPaw.11G011000 Carya illinoinensis HOM05D005518 ORTHO05D001269 7.8e-125 451.8 596 52.3
QL10p004779 Quercus lobata HOM05D005518 ORTHO05D001269 5.1e-124 449.1 608 52.0
Potri.012G094200 Populus trichocarpa HOM05D005518 ORTHO05D001269 1.9e-123 447.2 590 49.8
Eucgr.K02750 Eucalyptus grandis HOM05D005518 ORTHO05D001269 3.3e-123 446.4 592 50.7
Duzib205G1346 Durio zibethinus HOM05D005518 ORTHO05D001269 4.3e-123 446.0 591 49.7
GSVIVG01003640001 Vitis vinifera HOM05D005518 ORTHO05D001269 9.6e-123 444.9 601 49.9
Dinv04847 Davidia involucrata HOM05D005518 ORTHO05D001269 2.6e-120 436.8 609 49.9
Potri.015G091500 Populus trichocarpa HOM05D005518 ORTHO05D001269 3.4e-120 436.4 590 49.2
Sabra15G0113400 Salix brachista HOM05D005518 ORTHO05D001269 1.6e-117 427.6 611 47.6
Atru.chr9.1022 Acer truncatum HOM05D005518 ORTHO05D001269 2.1e-114 417.2 595 49.2
COL.COLO4_16831 Corchorus olitorius HOM05D005518 ORTHO05D001269 2.6e-112 410.2 577 48.7
PGR044G0025 Punica granatum HOM05D005518 ORTHO05D001269 2.6e-112 410.2 592 48.6
Gorai.006G270900 Gossypium raimondii HOM05D005518 ORTHO05D001269 5.8e-112 409.1 601 48.4
Lalb_Chr08g0237001 Lupinus albus HOM05D005518 ORTHO05D001269 2.2e-111 407.1 589 48.6
Gohir.D09G246400 Gossypium hirsutum HOM05D005518 ORTHO05D001269 5.5e-110 402.5 601 48.1
Manes.06G116500 Manihot esculenta HOM05D005518 ORTHO05D001269 5.5e-110 402.5 595 47.2
Lj1g0006481 Lotus japonicus HOM05D005518 ORTHO05D001269 6.0e-109 399.1 588 49.5
Glyma.06G172500 Glycine max HOM05D005518 ORTHO05D001269 1.0e-108 398.3 589 48.0
Lalb_Chr11g0069691 Lupinus albus HOM05D005518 ORTHO05D001269 1.8e-108 397.5 588 47.1
TWI14G0969 Tripterygium wilfordii HOM05D005518 ORTHO05D001269 5.1e-108 396.0 597 47.6
FAN18G1514 Fragaria x ananassa HOM05D000557 ORTHO05D001269 1.1e-107 394.8 567 48.9
Gohir.A11G035500 Gossypium hirsutum HOM05D005518 ORTHO05D001269 1.1e-107 394.8 598 47.0
Ciclev10019441m.g Citrus clementina HOM05D005518 ORTHO05D001269 2.5e-107 393.7 601 47.6
Gohir.A09G245800 Gossypium hirsutum HOM05D005518 ORTHO05D001269 1.6e-106 391.0 601 48.6
Actinidia16187 Actinidia chinensis HOM05D005518 ORTHO05D001269 2.1e-106 390.6 604 45.7
CSS0041106 Camellia sinensis var. sinensis HOM05D005518 ORTHO05D001269 2.1e-106 390.6 605 46.4
Gorai.007G042000 Gossypium raimondii HOM05D005518 ORTHO05D001269 8.1e-106 388.7 596 46.3
Haze_07258 Corylus avellana HOM05D005518 ORTHO05D001269 1.8e-105 387.5 514 52.1
TAR626G1948 Trochodendron aralioides HOM05D005518 ORTHO05D001269 4.0e-105 386.3 613 47.0
Dinv11102 Davidia involucrata HOM05D005518 ORTHO05D001269 1.5e-104 384.4 612 46.1
Gohir.D11G039100 Gossypium hirsutum HOM05D005518 ORTHO05D001269 5.8e-104 382.5 596 45.8
Manes.14G054500 Manihot esculenta HOM05D005518 ORTHO05D001269 2.3e-100 370.5 590 45.1
Medtr3g075070 Medicago truncatula HOM05D005518 ORTHO05D001269 2.1e-98 364.0 592 46.1
Glyma.04G193600 Glycine max HOM05D005518 ORTHO05D001269 2.8e-98 363.6 586 46.2
arahy.Tifrunner.gnm1.ann1.QFFJ7D Arachis hypogaea HOM05D005518 ORTHO05D001269 5.3e-97 359.4 604 44.0
TPR.G26139 Trifolium pratense HOM05D005518 ORTHO05D001269 6.9e-97 359.0 591 46.0
Psat5g139920 Pisum sativum HOM05D005518 ORTHO05D001269 4.5e-96 356.3 584 45.5
TWI23G0187 Tripterygium wilfordii HOM05D005518 ORTHO05D001269 1.3e-95 354.8 622 43.6
Duzib084G0018 Durio zibethinus HOM05D005518 ORTHO05D001269 1.1e-94 351.7 733 38.6
Actinidia36793 Actinidia chinensis HOM05D005518 ORTHO05D001269 3.2e-94 350.1 614 42.7
MD06G1148700 Malus domestica HOM05D005518 ORTHO05D001269 1.2e-93 348.2 592 44.9
DCAR_007472 Daucus carota HOM05D005518 ORTHO05D001269 2.1e-93 347.4 604 44.2
Nn1g07622 Nelumbo nucifera HOM05D005518 ORTHO05D001269 2.1e-93 347.4 617 44.4
Rhsim12G0172400 Rhododendron simsii HOM05D005518 ORTHO05D001269 3.6e-93 346.7 614 43.6
arahy.Tifrunner.gnm1.ann1.P5I184 Arachis hypogaea HOM05D001134 ORTHO05D001269 8.2e-90 335.5 560 43.9
Phvul.009G168300 Phaseolus vulgaris HOM05D005518 ORTHO05D001269 2.4e-89 334.0 596 43.3
SGA_v2.0_scaffold37G14614 Striga asiatica HOM05D005518 ORTHO05D001269 3.8e-87 326.6 621 42.2
PSO782G5170 Papaver somniferum HOM05D005518 ORTHO05D001269 1.1e-86 325.1 626 43.1
PGSC0003DMG400015252 Solanum tuberosum HOM05D005518 ORTHO05D001269 4.2e-86 323.2 601 41.8
Migut.D01234 Erythranthe guttata HOM05D005518 ORTHO05D001269 6.1e-85 319.3 608 42.9
vmacro16655 Vaccinium macrocarpon HOM05D005518 ORTHO05D001269 1.0e-84 318.5 623 41.7
MSTRG.22916 Avicennia marina HOM05D005518 ORTHO05D001269 3.9e-84 316.6 608 41.3
Lj9A476T55 Lonicera japonica HOM05D005518 ORTHO05D001269 1.1e-81 308.5 588 41.3
Sopen03g030200 Solanum pennellii HOM05D005518 ORTHO05D001269 3.1e-81 307.0 604 41.1
Lj5C99T12 Lonicera japonica HOM05D005518 ORTHO05D001269 5.3e-81 306.2 636 39.0
MBI14_g12740_MAGBIO Magnolia biondii HOM05D005518 ORTHO05D001269 1.2e-80 305.1 646 39.3
VMungo1309G2768 Vigna mungo HOM05D005518 ORTHO05D001269 3.4e-80 303.5 585 41.2
Peaxi162Scf00089g00324 Petunia axillaris HOM05D005518 ORTHO05D001269 5.9e-80 302.8 604 41.1
AUR62029840 Chenopodium quinoa HOM05D005518 ORTHO05D001269 2.2e-79 300.8 617 41.3
Hund02416 Selenicereus undatus HOM05D005518 ORTHO05D001269 5.0e-79 299.7 594 41.1
Solyc03g111030.3 Solanum lycopersicum HOM05D005518 ORTHO05D001269 6.5e-79 299.3 606 40.8
AUR62025869 Chenopodium quinoa HOM05D005518 ORTHO05D001269 7.9e-77 292.4 599 40.7
Nitab4.5_0005327g0060 Nicotiana tabacum HOM05D005518 ORTHO05D001269 1.8e-76 291.2 604 39.7
PSO063G3591 Papaver somniferum HOM05D005518 ORTHO05D001269 5.2e-76 289.7 624 39.9
Nitab4.5_0001664g0120 Nicotiana tabacum HOM05D005518 ORTHO05D001269 7.4e-75 285.8 599 40.2
Cc04_g10180 Coffea canephora HOM05D005518 ORTHO05D001269 2.2e-74 284.3 644 39.4
MSTRG.9316 Avicennia marina HOM05D005518 ORTHO05D001269 1.1e-73 282.0 612 38.6
Lsat_1_v5_gn_1_29580 Lactuca sativa HOM05D005518 ORTHO05D001269 4.1e-73 280.0 626 37.4
Oeu055998.1 Olea europaea HOM05D005518 ORTHO05D001269 1.0e-71 275.4 597 41.0
Sc04g0000850 Simmondsia chinensis HOM05D005518 ORTHO05D001269 3.8e-71 273.5 594 38.7
CAN.G352.49 Capsicum annuum HOM05D005518 ORTHO05D001269 1.1e-70 271.9 559 38.8
HanXRQChr02g0035181 Helianthus annuus HOM05D005518 ORTHO05D001269 1.2e-69 268.5 608 37.8
THA.LOC104825006 Tarenaya hassleriana HOM05D005518 ORTHO05D001269 2.0e-67 261.2 627 38.8
AL8G24460 Arabidopsis lyrata HOM05D005518 ORTHO05D001269 4.4e-67 260.0 647 36.3
AT5G50350 Arabidopsis thaliana HOM05D005518 ORTHO05D001269 1.7e-66 258.1 647 35.5
EL10As4g23466 Beta vulgaris HOM05D005518 ORTHO05D001269 3.7e-66 256.9 594 39.2
MD14G1162500 Malus domestica HOM05D005518 ORTHO05D001269 1.4e-65 255.0 342 55.6
HanXRQChr04g0100301 Helianthus annuus HOM05D005518 ORTHO05D001269 7.0e-65 252.7 704 36.2
CDE06G2288 Ceratophyllum demersum HOM05D005518 ORTHO05D005913 1.6e-64 251.5 581 39.2
ECA247G0960 Erigeron canadensis HOM05D005518 ORTHO05D001269 5.0e-63 246.5 669 36.0
THA.LOC104803143 Tarenaya hassleriana HOM05D005518 ORTHO05D001269 8.0e-61 239.2 685 35.6
Oeu023474.2 Olea europaea HOM05D005518 ORTHO05D001269 1.0e-60 238.8 603 37.8
SalBow1G4741 Salvia bowleyana HOM05D005518 ORTHO05D001269 6.8e-60 236.1 599 37.4
ATR0751G048 Amborella trichopoda HOM05D005518 ORTHO05D001269 2.6e-59 234.2 682 33.7
A03p27800 Brassica napus HOM05D005518 ORTHO05D001269 2.6e-59 234.2 645 34.3
CARHR258130 Cardamine hirsuta HOM05D005518 ORTHO05D001269 1.8e-57 228.0 638 35.3
Thhalv10013029m.g Eutrema salsugineum HOM05D005518 ORTHO05D001269 1.8e-57 228.0 669 33.9
Aqoxy4G02270 Aquilegia oxysepala HOM05D005518 ORTHO05D001269 3.1e-57 227.3 617 36.0
BcaB01g02898 Brassica carinata HOM05D004180 ORTHO05D001269 3.1e-57 227.3 636 34.0
CDE03G0480 Ceratophyllum demersum HOM05D005518 ORTHO05D001269 4.1e-57 226.9 590 35.6
Sp6g12480 Schrenkiella parvula HOM05D005518 ORTHO05D001269 2.2e-55 221.1 655 33.7
Oeu006376.1 Olea europaea HOM05D005518 ORTHO05D001269 8.5e-55 219.2 364 40.7
BraA03t11991Z Brassica rapa HOM05D005518 ORTHO05D001269 1.9e-54 218.0 645 33.2
Os06g0609800 Oryza sativa ssp. japonica HOM05D005518 ORTHO05D001269 1.9e-54 218.0 558 35.3
Carub.0008s1043 Capsella rubella HOM05D005518 ORTHO05D001269 2.5e-54 217.6 693 32.9
BolC3t15674H Brassica oleracea HOM05D005518 ORTHO05D001269 5.5e-54 216.5 636 33.0
Aa31LG3G5820 Aethionema arabicum HOM05D005518 ORTHO05D001269 1.2e-53 215.3 678 32.4
C03p33530 Brassica napus HOM05D005518 ORTHO05D001269 1.6e-53 214.9 636 33.0
BcaC01g04812 Brassica carinata HOM05D005518 ORTHO05D001269 3.6e-53 213.8 636 33.2
Zm00001eb388520 Zea mays HOM05D005518 ORTHO05D001269 6.8e-52 209.5 635 33.2
CSS0040133 Camellia sinensis var. sinensis HOM05D005518 ORTHO05D001269 1.1e-49 202.2 261 46.4
Actinidia25603 Actinidia chinensis HOM05D005518 ORTHO05D001269 1.4e-44 185.3 536 35.6
vmacro16713 Vaccinium macrocarpon HOM05D005518 ORTHO05D001269 4.4e-43 180.3 262 45.0
Ca_25438_v3 Cicer arietinum L. HOM05D005518 ORTHO05D001269 4.1e-41 173.7 195 51.8
Duzib068G1391 Durio zibethinus HOM05D005518 ORTHO05D001269 9.2e-41 172.6 259 46.7
CSS0031701 Camellia sinensis var. sinensis HOM05D005518 ORTHO05D001269 1.0e-39 169.1 350 43.1
MD14G1162600 Malus domestica HOM05D005518 ORTHO05D001269 1.0e-39 169.1 199 51.3
Sc22g0004150 Simmondsia chinensis HOM05D005518 ORTHO05D001269 6.8e-36 156.4 333 39.0
Migut.I00490 Erythranthe guttata HOM05D005518 ORTHO05D001269 6.6e-31 139.8 535 33.8
Ca_16087_v3 Cicer arietinum L. HOM05D005518 ORTHO05D001269 6.8e-28 129.8 178 55.1
Actinidia08857 Actinidia chinensis HOM05D005518 ORTHO05D001269 2.6e-27 127.9 301 39.9
unitig_22.g5764 Utricularia gibba HOM05D005518 ORTHO05D001269 4.1e-25 120.6 617 29.2
SEGI_40207 Sequoiadendron giganteum HOM05D005518 ORTHO05D001269 5.4e-25 120.2 648 30.2
HPP92_027039 Vanilla planifolia HOM05D005518 ORTHO05D001269 2.1e-24 118.2 346 37.3
vmacro16712 Vaccinium macrocarpon HOM05D005518 ORTHO05D001269 2.5e-22 111.3 262 41.2
SEGI_11479 Sequoiadendron giganteum HOM05D005518 ORTHO05D001269 3.6e-21 107.5 361 28.0
arahy.Tifrunner.gnm1.ann1.QJ9WGP Arachis hypogaea HOM05D001134 ORTHO05D001035 6.0e-16 90.1 104 57.7
COL.COLO4_28923 Corchorus olitorius HOM05D007286 ORTHO05D008955 2.3e-15 88.2 616 27.3
Cfa018874 Carpinus fangiana HOM05D005518 ORTHO05D001269 3.9e-15 87.4 91 61.5
Sc22g0004140 Simmondsia chinensis HOM05D005518 ORTHO05D001269 5.1e-15 87.0 107 54.2
MBI19_g06405_MAGBIO Magnolia biondii HOM05D007286 ORTHO05D008955 9.6e-14 82.8 613 27.2
Rhsim07G0072400 Rhododendron simsii HOM05D007286 ORTHO05D008955 2.4e-09 68.2 452 25.7
Eucgr.G02637 Eucalyptus grandis HOM05D007286 ORTHO05D008955 3.0e-07 61.2 578 24.9
RcHm_v2.0_Chr1g0331161 Rosa chinensis HOM05D007286 ORTHO05D008955 3.0e-07 61.2 447 27.5
TAR555G0002 Trochodendron aralioides HOM05D007286 ORTHO05D008955 5.1e-07 60.5 619 25.7
PGSC0003DMG401027501 Solanum tuberosum HOM05D007286 ORTHO05D008955 1.9e-06 58.5 598 23.9
Ciclev10000662m.g Citrus clementina HOM05D007286 ORTHO05D008955 4.3e-06 57.4 622 25.6
Actinidia12136 Actinidia chinensis HOM05D007286 ORTHO05D008955 9.6e-06 56.2 326 25.5
ATR0307G001 Amborella trichopoda HOM05D007286 ORTHO05D008955 9.6e-06 56.2 635 26.1


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