Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015635 Sechium edule HOM05D002815 ORTHO05D003409 1.7e-51 205.7 104 100.0
Oeu030686.2 Olea europaea HOM05D002815 ORTHO05D003409 5.9e-15 84.3 108 50.9
Ca_17698_v3 Cicer arietinum L. HOM05D002815 ORTHO05D003409 3.8e-14 81.6 108 49.1
ClCG01G019280 Citrullus lanatus HOM05D002815 ORTHO05D003409 5.0e-14 81.3 96 51.0
Oeu028529.1 Olea europaea HOM05D002815 ORTHO05D003409 5.0e-14 81.3 108 49.1
Cpa.g.sc196.4 Carica papaya HOM05D002815 ORTHO05D003409 8.5e-14 80.5 108 49.1
Sc07g0001510 Simmondsia chinensis HOM05D002815 ORTHO05D003409 2.5e-13 79.0 108 45.4
Sed0002780 Sechium edule HOM05D002815 ORTHO05D003409 9.4e-13 77.0 108 46.3
TWI53G1894 Tripterygium wilfordii HOM05D002815 ORTHO05D003409 9.4e-13 77.0 108 46.3
Sed0017782 Sechium edule HOM05D002815 ORTHO05D003409 2.1e-12 75.9 76 59.2
AUR62003313 Chenopodium quinoa HOM05D002815 ORTHO05D003409 2.7e-12 75.5 108 42.6
Rhsim08G0007600 Rhododendron simsii HOM05D002815 ORTHO05D003409 2.7e-12 75.5 107 45.8
Lalb_Chr12g0203561 Lupinus albus HOM05D002815 ORTHO05D003409 3.6e-12 75.1 107 46.7
EL10Ac6g14745 Beta vulgaris HOM05D002815 ORTHO05D003409 4.6e-12 74.7 108 43.5
Haze_25031 Corylus avellana HOM05D002815 ORTHO05D003409 4.6e-12 74.7 108 45.4
Lalb_Chr11g0068021 Lupinus albus HOM05D002815 ORTHO05D003409 4.6e-12 74.7 102 48.0
CiPaw.04G092700 Carya illinoinensis HOM05D002815 ORTHO05D003409 7.9e-12 73.9 108 46.3
Ah.02g124410 Amaranthus hybridus HOM05D002815 ORTHO05D003409 1.0e-11 73.6 108 43.5
arahy.Tifrunner.gnm1.ann1.U2FY0G Arachis hypogaea HOM05D002815 ORTHO05D003409 1.0e-11 73.6 108 45.4
BcaB01g05552 Brassica carinata HOM05D002815 ORTHO05D003409 1.0e-11 73.6 108 45.4
C03p04810 Brassica napus HOM05D002815 ORTHO05D003409 1.0e-11 73.6 108 45.4
CiPaw.03G135000 Carya illinoinensis HOM05D002815 ORTHO05D003409 1.0e-11 73.6 108 44.4
PGR102G0114 Punica granatum HOM05D002815 ORTHO05D003409 1.0e-11 73.6 108 41.7
Actinidia12206 Actinidia chinensis HOM05D002815 ORTHO05D003409 1.4e-11 73.2 107 46.7
TWI77G0240 Tripterygium wilfordii HOM05D002815 ORTHO05D003409 1.4e-11 73.2 108 44.4
QL06p032363 Quercus lobata HOM05D002815 ORTHO05D003409 1.8e-11 72.8 108 44.4
BraA03t09780Z Brassica rapa HOM05D002815 ORTHO05D003409 2.3e-11 72.4 108 44.4
Lalb_Chr07g0184831 Lupinus albus HOM05D002815 ORTHO05D003409 2.3e-11 72.4 108 44.4
Nn5g28923 Nelumbo nucifera HOM05D002815 ORTHO05D003409 3.9e-11 71.6 109 45.0
A03p04360 Brassica napus HOM05D002815 ORTHO05D003409 5.1e-11 71.2 108 43.5
Lsat_1_v5_gn_4_141120 Lactuca sativa HOM05D002815 ORTHO05D003409 6.7e-11 70.9 107 45.8
Lalb_Chr13g0296181 Lupinus albus HOM05D002815 ORTHO05D003409 6.7e-11 70.9 107 44.9
vmacro18628 Vaccinium macrocarpon HOM05D002815 ORTHO05D003409 6.7e-11 70.9 108 44.4
ClCG07G009280 Citrullus lanatus HOM05D002815 ORTHO05D003409 8.8e-11 70.5 78 50.0
Lj1g0001740 Lotus japonicus HOM05D002815 ORTHO05D003409 8.8e-11 70.5 108 45.4
unitig_736.g22623 Utricularia gibba HOM05D002815 ORTHO05D003409 1.1e-10 70.1 108 41.7
vmacro22670 Vaccinium macrocarpon HOM05D002815 ORTHO05D003409 1.1e-10 70.1 102 46.1
Actinidia28889 Actinidia chinensis HOM05D002815 ORTHO05D003409 1.5e-10 69.7 107 44.9
Hma1.2p1_0375F.1_g138590 Hydrangea macrophylla HOM05D002815 ORTHO05D003409 1.5e-10 69.7 108 43.5
TAR625G0199 Trochodendron aralioides HOM05D002815 ORTHO05D003409 1.5e-10 69.7 108 44.4
QL93p0275_0003 Quercus lobata HOM05D002815 ORTHO05D003409 2.0e-10 69.3 108 43.5
Sabra07G0068800 Salix brachista HOM05D002815 ORTHO05D003409 2.0e-10 69.3 108 42.6
Sc03g0004290 Simmondsia chinensis HOM05D002815 ORTHO05D003409 2.5e-10 68.9 108 45.4
Gohir.A12G092900 Gossypium hirsutum HOM05D002815 ORTHO05D003409 3.3e-10 68.6 93 46.2
Gohir.D11G056900 Gossypium hirsutum HOM05D002815 ORTHO05D003409 4.3e-10 68.2 108 44.4
Glyma.20G028200 Glycine max HOM05D002815 ORTHO05D003409 5.7e-10 67.8 108 43.5
Glyma.04G220100 Glycine max HOM05D002815 ORTHO05D003409 9.7e-10 67.0 108 43.5
SalBow5G2996 Salvia bowleyana HOM05D002815 ORTHO05D003409 9.7e-10 67.0 76 51.3
MSTRG.3807 Avicennia marina HOM05D002815 ORTHO05D003409 1.3e-09 66.6 76 51.3
CDE02G3240 Ceratophyllum demersum HOM05D002815 ORTHO05D003409 1.3e-09 66.6 108 43.5
Prupe.6G174800 Prunus persica HOM05D002815 ORTHO05D003409 1.3e-09 66.6 107 43.0
VMungo0251G0260 Vigna mungo HOM05D002815 ORTHO05D003409 1.3e-09 66.6 78 47.4
Phvul.002G264400 Phaseolus vulgaris HOM05D002815 ORTHO05D003409 1.7e-09 66.2 76 48.7
Phvul.009G140200 Phaseolus vulgaris HOM05D002815 ORTHO05D003409 1.7e-09 66.2 78 46.2
BcaB05g21510 Brassica carinata HOM05D002815 ORTHO05D003409 2.2e-09 65.9 104 41.3
CsaV3_UNG177370 Cucumis sativus L. HOM05D002815 ORTHO05D003409 2.2e-09 65.9 78 46.2
Manes.12G141500 Manihot esculenta HOM05D002815 ORTHO05D003409 2.2e-09 65.9 78 47.4
SGA_v2.0_scaffold51G18741 Striga asiatica HOM05D002815 ORTHO05D003409 2.2e-09 65.9 78 46.2
GSVIVG01022216001 Vitis vinifera HOM05D002815 ORTHO05D003409 2.8e-09 65.5 108 43.5
Hund03546 Selenicereus undatus HOM05D002815 ORTHO05D003409 3.7e-09 65.1 108 41.7
TPR.G7302 Trifolium pratense HOM05D002815 ORTHO05D003409 3.7e-09 65.1 45 64.4
Gorai.007G062100 Gossypium raimondii HOM05D002815 ORTHO05D003409 4.8e-09 64.7 107 43.9
Psat7g052080 Pisum sativum HOM05D002815 ORTHO05D003409 4.8e-09 64.7 44 65.9
Sabra05G0068800 Salix brachista HOM05D002815 ORTHO05D003409 4.8e-09 64.7 107 43.0
arahy.Tifrunner.gnm1.ann1.438YJL Arachis hypogaea HOM05D002815 ORTHO05D003409 6.3e-09 64.3 108 39.8
Gohir.A11G053400 Gossypium hirsutum HOM05D002815 ORTHO05D003409 6.3e-09 64.3 108 43.5
VMungo1309G2726 Vigna mungo HOM05D002815 ORTHO05D003409 6.3e-09 64.3 78 44.9
Ciclev10025987m.g Citrus clementina HOM05D002815 ORTHO05D003409 8.2e-09 63.9 108 42.6
AL6G20450 Arabidopsis lyrata HOM05D002815 ORTHO05D003409 1.1e-08 63.5 108 41.7
Glyma.05G183300 Glycine max HOM05D002815 ORTHO05D003409 1.1e-08 63.5 108 38.0
Carub.0006s0847 Capsella rubella HOM05D002815 ORTHO05D003409 1.4e-08 63.2 108 41.7
Cc07_g16040 Coffea canephora HOM05D002815 ORTHO05D003409 1.4e-08 63.2 108 41.7
Thhalv10013514m.g Eutrema salsugineum HOM05D002815 ORTHO05D003409 1.4e-08 63.2 108 41.7
MBI02_g13021_MAGBIO Magnolia biondii HOM05D002815 ORTHO05D003409 1.4e-08 63.2 108 39.8
Aqoxy2G03268 Aquilegia oxysepala HOM05D002815 ORTHO05D003409 1.8e-08 62.8 109 39.4
Duzib147G1220 Durio zibethinus HOM05D002815 ORTHO05D003409 1.8e-08 62.8 47 66.0
Gohir.D11G226300 Gossypium hirsutum HOM05D002815 ORTHO05D003409 1.8e-08 62.8 47 66.0
Gorai.007G244200 Gossypium raimondii HOM05D002815 ORTHO05D003409 1.8e-08 62.8 47 66.0
Potri.005G083700 Populus trichocarpa HOM05D002815 ORTHO05D003409 1.8e-08 62.8 76 51.3
Potri.007G082000 Populus trichocarpa HOM05D002815 ORTHO05D003409 1.8e-08 62.8 78 43.6
Thecc.01G111500 Theobroma cacao HOM05D002815 ORTHO05D003409 1.8e-08 62.8 47 66.0
AT5G10010 Arabidopsis thaliana HOM05D002815 ORTHO05D003409 2.4e-08 62.4 108 42.6
arahy.Tifrunner.gnm1.ann1.HMT8RT Arachis hypogaea HOM05D002815 ORTHO05D003409 3.1e-08 62.0 127 38.6
Dinv42702 Davidia involucrata HOM05D002815 ORTHO05D003409 3.1e-08 62.0 108 35.2
Migut.H02424 Erythranthe guttata HOM05D002815 ORTHO05D003409 3.1e-08 62.0 78 50.0
Glyma.08G141100 Glycine max HOM05D002815 ORTHO05D003409 4.1e-08 61.6 77 44.2
CSS0001160 Camellia sinensis var. sinensis HOM05D002815 ORTHO05D003409 5.3e-08 61.2 105 43.8
CSS0027096 Camellia sinensis var. sinensis HOM05D002815 ORTHO05D003409 5.3e-08 61.2 105 43.8
AUR62016270 Chenopodium quinoa HOM05D002815 ORTHO05D003409 9.1e-08 60.5 108 38.9
Duzib187G1281 Durio zibethinus HOM05D002815 ORTHO05D003409 9.1e-08 60.5 81 44.4
Nn1g05194 Nelumbo nucifera HOM05D002815 ORTHO05D003409 9.1e-08 60.5 78 44.9
Aqoxy5G01953 Aquilegia oxysepala HOM05D002815 ORTHO05D003409 1.2e-07 60.1 108 39.8
COL.COLO4_11025 Corchorus olitorius HOM05D002815 ORTHO05D003409 1.2e-07 60.1 81 46.9
CsaV3_6G045970 Cucumis sativus L. HOM05D002815 ORTHO05D003409 1.2e-07 60.1 110 42.7
Dinv19499 Davidia involucrata HOM05D002815 ORTHO05D003409 1.2e-07 60.1 78 44.9
Gohir.A11G198500 Gossypium hirsutum HOM05D002815 ORTHO05D003409 1.5e-07 59.7 47 63.8
Thhalv10015997m.g Eutrema salsugineum HOM05D002815 ORTHO05D003409 2.6e-07 58.9 109 40.4
Rhsim05G0107000 Rhododendron simsii HOM05D002815 ORTHO05D003409 2.6e-07 58.9 81 45.7
Gohir.D12G093900 Gossypium hirsutum HOM05D002815 ORTHO05D003409 4.5e-07 58.2 47 63.8
Gorai.008G102000 Gossypium raimondii HOM05D002815 ORTHO05D003409 4.5e-07 58.2 47 63.8
HanXRQChr10g0305391 Helianthus annuus HOM05D002815 ORTHO05D003409 5.9e-07 57.8 108 40.7
Lsat_1_v5_gn_4_140960 Lactuca sativa HOM05D002815 ORTHO05D003409 5.9e-07 57.8 108 38.9
Lj2A562T47 Lonicera japonica HOM05D002815 ORTHO05D003409 5.9e-07 57.8 78 42.3
SEGI_12429 Sequoiadendron giganteum HOM05D002815 ORTHO05D003409 5.9e-07 57.8 109 35.8
Lj4g0018156 Lotus japonicus HOM05D002815 ORTHO05D003409 7.7e-07 57.4 78 41.0
arahy.Tifrunner.gnm1.ann1.32ZMRL Arachis hypogaea HOM05D002815 ORTHO05D003409 1.0e-06 57.0 124 35.5
CANSAT01G1961 Cannabis sativa HOM05D002815 ORTHO05D003409 1.0e-06 57.0 78 41.0
RhsimUnG0215100 Rhododendron simsii HOM05D002815 ORTHO05D003409 1.3e-06 56.6 81 44.4
Lj1g0003133 Lotus japonicus HOM05D002815 ORTHO05D003409 1.7e-06 56.2 108 38.0
Rhsim10G0013400 Rhododendron simsii HOM05D002815 ORTHO05D003409 1.7e-06 56.2 81 44.4
Sp6g33390 Schrenkiella parvula HOM05D002815 ORTHO05D003409 2.9e-06 55.5 81 45.7
C02p04200 Brassica napus HOM05D002815 ORTHO05D003409 5.0e-06 54.7 74 43.2
Solyc04g054180.4 Solanum lycopersicum HOM05D002815 ORTHO05D003409 6.5e-06 54.3 69 47.8
Sopen04g023640 Solanum pennellii HOM05D002815 ORTHO05D003409 6.5e-06 54.3 45 60.0
A02p00280 Brassica napus HOM05D002815 ORTHO05D003409 8.5e-06 53.9 78 42.3
BraA02t05013Z Brassica rapa HOM05D002815 ORTHO05D003409 8.5e-06 53.9 78 42.3


User provided reference genes

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