Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015612 Sechium edule HOM05D005967 ORTHO05D005174 7.7e-65 250.4 129 100.0
CsaV3_1G034090 Cucumis sativus L. HOM05D005967 ORTHO05D005174 5.7e-44 181.0 127 78.7
MELO3C020645.2 Cucumis melo HOM05D005967 ORTHO05D005174 2.0e-41 172.6 129 76.0
ClCG03G001590 Citrullus lanatus HOM05D005967 ORTHO05D005174 4.2e-31 138.3 103 74.8
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 8.9e-21 104.0 144 45.1
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 6.4e-19 97.8 149 43.0
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 1.8e-18 96.3 157 42.0
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 1.6e-17 93.2 159 40.3
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 2.0e-17 92.8 177 36.2
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 5.9e-17 91.3 155 41.3
Dinv12413 Davidia involucrata HOM05D005967 ORTHO05D005174 1.7e-16 89.7 149 42.3
Duzib168G1635 Durio zibethinus HOM05D005967 ORTHO05D005174 1.5e-15 86.7 166 38.6
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 1.9e-15 86.3 164 40.9
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 4.3e-15 85.1 93 54.8
Prupe.6G078900 Prunus persica HOM05D005967 ORTHO05D005174 4.3e-15 85.1 91 57.1
CiPaw.14G068900 Carya illinoinensis HOM05D005967 ORTHO05D005174 9.5e-15 84.0 76 57.9
Gohir.D07G102400 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.2e-14 83.6 74 56.8
Gorai.001G110300 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.6e-14 83.2 85 51.8
Potri.001G239000 Populus trichocarpa HOM05D005967 ORTHO05D005174 2.8e-14 82.4 153 39.9
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 3.6e-14 82.0 80 56.2
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 4.7e-14 81.6 158 36.7
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 4.7e-14 81.6 67 64.2
FAN16G3022 Fragaria x ananassa HOM05D005967 ORTHO05D005174 6.2e-14 81.3 111 49.5
FAN21G3710 Fragaria x ananassa HOM05D005967 ORTHO05D005174 6.2e-14 81.3 111 49.5
Ciclev10029478m.g Citrus clementina HOM05D005967 ORTHO05D005174 1.4e-13 80.1 158 34.2
COL.COLO4_18500 Corchorus olitorius HOM05D005967 ORTHO05D005174 1.4e-13 80.1 74 58.1
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.4e-13 80.1 165 34.5
Gohir.D03G126300 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.8e-13 79.7 80 57.5
FAN11G1916 Fragaria x ananassa HOM05D005967 ORTHO05D005174 2.3e-13 79.3 97 51.5
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 3.1e-13 79.0 90 50.0
FAN25G3118 Fragaria x ananassa HOM05D005967 ORTHO05D005174 5.2e-13 78.2 111 48.6
CiPaw.13G095300 Carya illinoinensis HOM05D005967 ORTHO05D005174 8.9e-13 77.4 167 32.9
FvH4_3g35950 Fragaria vesca HOM05D005967 ORTHO05D005174 8.9e-13 77.4 97 50.5
MD11G1110400 Malus domestica HOM05D005967 ORTHO05D005174 8.9e-13 77.4 165 37.6
Nn2g10378 Nelumbo nucifera HOM05D005967 ORTHO05D005174 1.2e-12 77.0 79 53.2
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 1.2e-12 77.0 153 35.3
RcHm_v2.0_Chr5g0064301 Rosa chinensis HOM05D005967 ORTHO05D005174 3.4e-12 75.5 105 48.6
Atru.chr3.3892 Acer truncatum HOM05D005967 ORTHO05D005174 5.8e-12 74.7 101 50.5
Thecc.09G322800 Theobroma cacao HOM05D005967 ORTHO05D005174 5.8e-12 74.7 91 45.1
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 5.8e-12 74.7 102 45.1
DCAR_005974 Daucus carota HOM05D005967 ORTHO05D005174 9.8e-12 73.9 77 50.6
Gohir.A03G037600 Gossypium hirsutum HOM05D005967 ORTHO05D005174 9.8e-12 73.9 143 40.6
MD03G1095400 Malus domestica HOM05D005967 ORTHO05D005174 9.8e-12 73.9 122 43.4
Sabra16G0144100 Salix brachista HOM05D005967 ORTHO05D005174 1.3e-11 73.6 83 51.8
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 2.2e-11 72.8 60 58.3
Dinv16991 Davidia involucrata HOM05D005967 ORTHO05D005174 2.2e-11 72.8 92 53.3
Dinv42940 Davidia involucrata HOM05D005967 ORTHO05D005174 2.2e-11 72.8 92 53.3
Dinv43160 Davidia involucrata HOM05D005967 ORTHO05D005174 2.2e-11 72.8 92 53.3
Duzib093G0486 Durio zibethinus HOM05D005967 ORTHO05D005174 2.9e-11 72.4 86 47.7
Gohir.D01G212200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.9e-11 72.4 114 36.8
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 3.7e-11 72.0 114 39.5
CANSAT54G2543 Cannabis sativa HOM05D005967 ORTHO05D005174 4.9e-11 71.6 123 39.0
Glyma.13G335500 Glycine max HOM05D005967 ORTHO05D005174 4.9e-11 71.6 69 47.8
Gohir.A01G222700 Gossypium hirsutum HOM05D005967 ORTHO05D005174 8.3e-11 70.9 81 44.4
Potri.006G084700 Populus trichocarpa HOM05D005967 ORTHO05D005174 1.1e-10 70.5 76 55.3
CSS0050430 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 1.4e-10 70.1 82 56.1
Glyma.15G038800 Glycine max HOM05D005967 ORTHO05D005174 1.4e-10 70.1 71 53.5
Manes.09G089000 Manihot esculenta HOM05D005967 ORTHO05D005174 1.4e-10 70.1 111 40.5
Duzib106G1613 Durio zibethinus HOM05D005967 ORTHO05D005174 1.9e-10 69.7 101 40.6
VMungo1080G1048 Vigna mungo HOM05D005967 ORTHO05D005174 1.9e-10 69.7 79 48.1
Aqoxy4G02913 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 4.1e-10 68.6 89 48.3
Nn5g26925 Nelumbo nucifera HOM05D005967 ORTHO05D005174 5.4e-10 68.2 90 50.0
Oeu019207.1 Olea europaea HOM05D005967 ORTHO05D005174 5.4e-10 68.2 131 41.2
TWI79G0544 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 9.2e-10 67.4 79 54.4
Eucgr.B02374 Eucalyptus grandis HOM05D005967 ORTHO05D005174 1.6e-09 66.6 76 50.0
Phvul.L004943 Phaseolus vulgaris HOM05D005967 ORTHO05D005174 1.6e-09 66.6 104 38.5
Prupe.6G254000 Prunus persica HOM05D005967 ORTHO05D005174 1.6e-09 66.6 103 37.9
Thecc.05G040600 Theobroma cacao HOM05D005967 ORTHO05D005174 1.6e-09 66.6 101 42.6
Sabra06G0064300 Salix brachista HOM05D000729 ORTHO05D001063 4.6e-09 65.1 105 44.8
DCAR_005325 Daucus carota HOM05D005967 ORTHO05D005174 7.8e-09 64.3 77 49.4
MBI05_g30241_MAGBIO Magnolia biondii HOM05D005967 ORTHO05D005174 7.8e-09 64.3 87 42.5
Cfa017389 Carpinus fangiana HOM05D005967 ORTHO05D005174 1.0e-08 63.9 66 51.5
Ca_28209_v3 Cicer arietinum L. HOM05D005967 ORTHO05D005174 1.0e-08 63.9 110 42.7
Lj3g0014047 Lotus japonicus HOM05D005967 ORTHO05D005174 1.0e-08 63.9 61 57.4
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 1.7e-08 63.2 97 40.2
Gohir.D04G121000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.7e-08 63.2 81 43.2
Gorai.012G103600 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.7e-08 63.2 81 43.2
Oeu054156.1 Olea europaea HOM05D005967 ORTHO05D005174 1.7e-08 63.2 80 50.0
VMungo1309G2816 Vigna mungo HOM05D005967 ORTHO05D005174 3.9e-08 62.0 65 49.2
EL10As1g23034 Beta vulgaris HOM05D005967 ORTHO05D005174 6.6e-08 61.2 88 45.5
Peaxi162Scf00679g00042 Petunia axillaris HOM05D005967 ORTHO05D014046 8.6e-08 60.8 87 41.4
Actinidia23945 Actinidia chinensis HOM05D005967 ORTHO05D005174 1.1e-07 60.5 68 52.9
TAR636G2062 Trochodendron aralioides HOM05D000645 ORTHO05D000494 1.1e-07 60.5 142 33.1
MSTRG.5669 Avicennia marina HOM05D005967 ORTHO05D005174 1.5e-07 60.1 104 39.4
Migut.J00334 Erythranthe guttata HOM05D005967 ORTHO05D005174 1.9e-07 59.7 78 46.2
TPR.G5598 Trifolium pratense HOM05D005967 ORTHO05D005174 1.9e-07 59.7 98 35.7
SGA_v2.0_scaffold126G33790 Striga asiatica HOM05D005967 ORTHO05D005174 2.5e-07 59.3 78 42.3
Peaxi162Scf00832g00006 Petunia axillaris HOM05D030065 ORTHO05D005174 3.3e-07 58.9 94 45.7
CiPaw.09G192100 Carya illinoinensis HOM05D005967 ORTHO05D005174 4.3e-07 58.5 81 39.5
Hma1.2p1_1829F.1_g304460 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 4.3e-07 58.5 120 34.2
TWI53G1171 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 4.3e-07 58.5 95 43.2
Oeu036150.1 Olea europaea HOM05D005967 ORTHO05D005174 5.6e-07 58.2 80 41.2
Oeu036152.1 Olea europaea HOM05D005967 ORTHO05D005174 5.6e-07 58.2 80 41.2
Nitab4.5_0004094g0010 Nicotiana tabacum HOM05D005967 ORTHO05D005174 7.3e-07 57.8 67 46.3
Oeu038352.1 Olea europaea HOM05D005967 ORTHO05D005174 7.3e-07 57.8 64 46.9
Oeu007791.1 Olea europaea HOM05D005967 ORTHO05D005174 9.5e-07 57.4 76 42.1
Oeu011403.1 Olea europaea HOM05D005967 ORTHO05D005174 9.5e-07 57.4 83 43.4
Migut.N02671 Erythranthe guttata HOM05D005967 ORTHO05D005174 1.2e-06 57.0 75 50.7
Rhsim01G0227100 Rhododendron simsii HOM05D005967 ORTHO05D005174 1.2e-06 57.0 71 46.5
Rhsim05G0192000 Rhododendron simsii HOM05D005967 ORTHO05D005174 1.2e-06 57.0 79 40.5
MSTRG.19086 Avicennia marina HOM05D005967 ORTHO05D005174 3.6e-06 55.5 78 43.6
Eucgr.A01260 Eucalyptus grandis HOM05D005967 ORTHO05D005174 6.2e-06 54.7 87 40.2
Gohir.A04G082200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 6.2e-06 54.7 75 41.3
Lj3g0001714 Lotus japonicus HOM05D005967 ORTHO05D005174 6.2e-06 54.7 56 53.6
Psat0s8791g0040 Pisum sativum HOM05D005967 ORTHO05D005174 6.2e-06 54.7 69 49.3
QL08p052941 Quercus lobata HOM05D005304 ORTHO05D004438 8.1e-06 54.3 55 52.7
TPR.G14476 Trifolium pratense HOM05D005967 ORTHO05D005174 8.1e-06 54.3 113 36.3


User provided reference genes

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