Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015600 Sechium edule HOM05D000926 ORTHO05D000707 8.9e-44 179.9 90 100.0
ClCG06G015310 Citrullus lanatus HOM05D000926 ORTHO05D000707 4.7e-29 131.0 83 74.7
CsaV3_1G003190 Cucumis sativus L. HOM05D000926 ORTHO05D000707 1.2e-27 126.3 86 72.1
TAR629G1973 Trochodendron aralioides HOM05D000926 ORTHO05D000707 8.1e-13 77.0 83 44.6
Duzib084G1204 Durio zibethinus HOM05D000926 ORTHO05D000707 1.1e-12 76.6 79 45.6
Thecc.04G113000 Theobroma cacao HOM05D000926 ORTHO05D000707 2.4e-12 75.5 79 46.8
Lalb_Chr10g0092471 Lupinus albus HOM05D000926 ORTHO05D000707 6.9e-12 73.9 77 41.6
Cfa007731 Carpinus fangiana HOM05D000926 ORTHO05D000707 1.2e-11 73.2 79 43.0
CiPaw.03G080100 Carya illinoinensis HOM05D000926 ORTHO05D000707 4.4e-11 71.2 82 43.9
TAR374G1048 Trochodendron aralioides HOM05D000926 ORTHO05D000707 4.4e-11 71.2 79 46.8
Duzib138G1671 Durio zibethinus HOM05D000926 ORTHO05D000707 5.8e-11 70.9 79 41.8
Gohir.D03G099400 Gossypium hirsutum HOM05D000926 ORTHO05D000707 7.6e-11 70.5 79 43.0
Gorai.003G104400 Gossypium raimondii HOM05D000926 ORTHO05D000707 7.6e-11 70.5 79 43.0
Lalb_Chr10g0092481 Lupinus albus HOM05D000926 ORTHO05D000707 1.3e-10 69.7 81 42.0
Medtr7g018090 Medicago truncatula HOM05D000926 ORTHO05D000707 1.3e-10 69.7 84 39.3
QL02p063891 Quercus lobata HOM05D000926 ORTHO05D000707 1.3e-10 69.7 82 41.5
Gohir.A03G072800 Gossypium hirsutum HOM05D000926 ORTHO05D000707 1.7e-10 69.3 79 43.0
Haze_14349 Corylus avellana HOM05D000926 ORTHO05D000707 2.9e-10 68.6 79 39.2
Manes.05G115600 Manihot esculenta HOM05D000926 ORTHO05D000707 2.9e-10 68.6 82 40.2
Sabra17G0090100 Salix brachista HOM05D000926 ORTHO05D000707 2.9e-10 68.6 78 42.3
CiPaw.03G077200 Carya illinoinensis HOM05D000926 ORTHO05D000707 3.8e-10 68.2 84 41.7
Potri.004G108680 Populus trichocarpa HOM05D000926 ORTHO05D000707 3.8e-10 68.2 79 43.0
Cfa007730 Carpinus fangiana HOM05D000926 ORTHO05D000707 4.9e-10 67.8 83 39.8
THA.LOC109116337 Tarenaya hassleriana HOM05D000926 ORTHO05D000707 4.9e-10 67.8 84 38.1
COL.COLO4_33437 Corchorus olitorius HOM05D000926 ORTHO05D000707 6.4e-10 67.4 81 44.4
Glyma.18G277600 Glycine max HOM05D000926 ORTHO05D000707 6.4e-10 67.4 81 40.7
Manes.01G106100 Manihot esculenta HOM05D000926 ORTHO05D000707 6.4e-10 67.4 83 42.2
Potri.017G107200 Populus trichocarpa HOM05D000926 ORTHO05D000707 6.4e-10 67.4 79 43.0
Aa31LG9G16890 Aethionema arabicum HOM05D000926 ORTHO05D000707 8.4e-10 67.0 77 41.6
Ciclev10013138m.g Citrus clementina HOM05D000926 ORTHO05D000707 8.4e-10 67.0 81 42.0
Hma1.2p1_0588F.1_g184540 Hydrangea macrophylla HOM05D000926 ORTHO05D000707 8.4e-10 67.0 79 36.7
Manes.02G062400 Manihot esculenta HOM05D000926 ORTHO05D000707 8.4e-10 67.0 77 41.6
Cpa.g.sc70.7 Carica papaya HOM05D000926 ORTHO05D000707 1.1e-09 66.6 84 41.7
Eucgr.J01436 Eucalyptus grandis HOM05D000926 ORTHO05D000707 1.1e-09 66.6 79 44.3
Aqoxy3G00596 Aquilegia oxysepala HOM05D000926 ORTHO05D000707 1.4e-09 66.2 83 41.0
Glyma.08G254800 Glycine max HOM05D000926 ORTHO05D000707 1.4e-09 66.2 84 39.3
Glyma.19G038700 Glycine max HOM05D000926 ORTHO05D000707 1.4e-09 66.2 78 41.0
Medtr0542s0020 Medicago truncatula HOM05D000926 ORTHO05D000707 1.4e-09 66.2 80 38.8
Potri.017G107300 Populus trichocarpa HOM05D000926 ORTHO05D000707 1.4e-09 66.2 80 41.2
RcHm_v2.0_Chr2g0164101 Rosa chinensis HOM05D000926 ORTHO05D000707 1.4e-09 66.2 80 37.5
Dinv34883 Davidia involucrata HOM05D000926 ORTHO05D000707 1.9e-09 65.9 78 35.9
Eucgr.J01437 Eucalyptus grandis HOM05D000926 ORTHO05D000707 1.9e-09 65.9 79 40.5
Gohir.A07G178200 Gossypium hirsutum HOM05D000926 ORTHO05D000707 1.9e-09 65.9 77 39.0
Potri.004G108440 Populus trichocarpa HOM05D000926 ORTHO05D000707 1.9e-09 65.9 78 39.7
TPR.G3253 Trifolium pratense HOM05D000926 ORTHO05D000707 1.9e-09 65.9 79 38.0
Actinidia17614 Actinidia chinensis HOM05D000926 ORTHO05D000707 2.4e-09 65.5 81 40.7
Ciclev10023021m.g Citrus clementina HOM05D000926 ORTHO05D000707 2.4e-09 65.5 80 37.5
Gohir.D07G185000 Gossypium hirsutum HOM05D000926 ORTHO05D000707 2.4e-09 65.5 77 40.3
Gorai.001G205500 Gossypium raimondii HOM05D000926 ORTHO05D000707 2.4e-09 65.5 77 40.3
Rhsim08G0078900 Rhododendron simsii HOM05D000926 ORTHO05D000707 2.4e-09 65.5 77 37.7
Atru.chr9.649 Acer truncatum HOM05D000926 ORTHO05D000707 3.2e-09 65.1 78 37.2
AUR62023120 Chenopodium quinoa HOM05D000926 ORTHO05D000707 3.2e-09 65.1 84 38.1
Duzib211G0100 Durio zibethinus HOM05D000926 ORTHO05D000707 3.2e-09 65.1 83 41.0
Eucgr.J01435 Eucalyptus grandis HOM05D000926 ORTHO05D000707 3.2e-09 65.1 79 40.5
GSVIVG01036505001 Vitis vinifera HOM05D000926 ORTHO05D000707 3.2e-09 65.1 78 44.9
Eucgr.J01438 Eucalyptus grandis HOM05D000926 ORTHO05D000707 4.2e-09 64.7 79 45.6
FvH4_6g45911 Fragaria vesca HOM05D000926 ORTHO05D000707 5.4e-09 64.3 79 38.0
Hma1.2p1_0595F.1_g186210 Hydrangea macrophylla HOM05D000926 ORTHO05D000707 5.4e-09 64.3 90 37.8
Lj1g0009060 Lotus japonicus HOM05D000926 ORTHO05D000707 5.4e-09 64.3 81 39.5
Phvul.008G023400 Phaseolus vulgaris HOM05D000926 ORTHO05D000707 5.4e-09 64.3 83 36.1
SalBow1G1369 Salvia bowleyana HOM05D000926 ORTHO05D000707 5.4e-09 64.3 82 41.5
DCAR_010193 Daucus carota HOM05D000926 ORTHO05D000707 7.1e-09 63.9 79 36.7
Nn4g23604 Nelumbo nucifera HOM05D000926 ORTHO05D000707 7.1e-09 63.9 79 40.5
PGR042G0931 Punica granatum HOM05D000926 ORTHO05D000707 7.1e-09 63.9 82 46.3
CiPaw.03G080200 Carya illinoinensis HOM05D000926 ORTHO05D000707 9.3e-09 63.5 77 39.0
EL10Ac2g04400 Beta vulgaris HOM05D000926 ORTHO05D000707 1.2e-08 63.2 84 38.1
MBI15_g03197_MAGBIO Magnolia biondii HOM05D000926 ORTHO05D000707 1.2e-08 63.2 80 40.0
Oeu032854.1 Olea europaea HOM05D000926 ORTHO05D000707 1.2e-08 63.2 79 41.8
PGR004G2735 Punica granatum HOM05D000926 ORTHO05D000707 1.2e-08 63.2 76 38.2
Thecc.03G112300 Theobroma cacao HOM05D000926 ORTHO05D000707 1.2e-08 63.2 80 43.8
Dinv38621 Davidia involucrata HOM05D000926 ORTHO05D000707 1.6e-08 62.8 83 37.3
HanXRQChr09g0263311 Helianthus annuus HOM05D000926 ORTHO05D000707 1.6e-08 62.8 85 40.0
Manes.01G105800 Manihot esculenta HOM05D000926 ORTHO05D000707 1.6e-08 62.8 77 41.6
Actinidia26283 Actinidia chinensis HOM05D000926 ORTHO05D000707 2.1e-08 62.4 78 42.3
Cfa007729 Carpinus fangiana HOM05D000926 ORTHO05D000707 2.1e-08 62.4 78 44.9
Oeu049341.1 Olea europaea HOM05D000926 ORTHO05D000707 2.1e-08 62.4 80 40.0
Potri.017G107400 Populus trichocarpa HOM05D000926 ORTHO05D000707 2.1e-08 62.4 78 37.2
Migut.K00874 Erythranthe guttata HOM05D000926 ORTHO05D000707 2.7e-08 62.0 80 38.8
Manes.02G062600 Manihot esculenta HOM05D000926 ORTHO05D000707 2.7e-08 62.0 81 38.3
Sabra04G0073900 Salix brachista HOM05D000926 ORTHO05D000707 2.7e-08 62.0 79 38.0
Sabra17G0090200 Salix brachista HOM05D000926 ORTHO05D000707 2.7e-08 62.0 80 40.0
CSS0045695 Camellia sinensis var. sinensis HOM05D000926 ORTHO05D000707 3.5e-08 61.6 87 35.6
FAN05G2016 Fragaria x ananassa HOM05D000926 ORTHO05D000707 3.5e-08 61.6 79 35.4
Manes.01G105900 Manihot esculenta HOM05D000926 ORTHO05D000707 3.5e-08 61.6 77 41.6
MSTRG.3384 Avicennia marina HOM05D000926 ORTHO05D000707 4.6e-08 61.2 79 38.0
Aqoxy3G00594 Aquilegia oxysepala HOM05D000926 ORTHO05D000707 6.0e-08 60.8 84 38.1
CSS0017323 Camellia sinensis var. sinensis HOM05D000926 ORTHO05D000707 6.0e-08 60.8 84 36.9
CiPaw.03G080300 Carya illinoinensis HOM05D000926 ORTHO05D000707 6.0e-08 60.8 85 41.2
DCAR_002021 Daucus carota HOM05D000926 ORTHO05D000707 6.0e-08 60.8 79 40.5
DCAR_010990 Daucus carota HOM05D000926 ORTHO05D000707 6.0e-08 60.8 79 41.8
Lju361C12T10 Lonicera japonica HOM05D000926 ORTHO05D000707 6.0e-08 60.8 82 37.8
PGR042G1069 Punica granatum HOM05D000926 ORTHO05D000707 6.0e-08 60.8 78 39.7
Sc10g0000430 Simmondsia chinensis HOM05D000926 ORTHO05D000707 6.0e-08 60.8 78 37.2
ATR0691G108 Amborella trichopoda HOM05D000926 ORTHO05D000707 7.8e-08 60.5 77 37.7
Hma1.2p1_2231F.1_g317580 Hydrangea macrophylla HOM05D000926 ORTHO05D000707 7.8e-08 60.5 82 37.8
Aqoxy3G03797 Aquilegia oxysepala HOM05D000926 ORTHO05D000707 1.0e-07 60.1 80 42.5
ECA232G0239 Erigeron canadensis HOM05D000926 ORTHO05D000707 1.0e-07 60.1 82 39.0
arahy.Tifrunner.gnm1.ann1.DUC516 Arachis hypogaea HOM05D000926 ORTHO05D000707 1.3e-07 59.7 84 36.9
HanXRQChr14g0439481 Helianthus annuus HOM05D000926 ORTHO05D000707 1.3e-07 59.7 88 43.2
Migut.H00567 Erythranthe guttata HOM05D000926 ORTHO05D000707 1.7e-07 59.3 80 38.8
Psat3g193960 Pisum sativum HOM05D000926 ORTHO05D000707 1.7e-07 59.3 80 33.8
TPR.G3243 Trifolium pratense HOM05D000926 ORTHO05D000707 1.7e-07 59.3 84 34.5
Hma1.2p1_0588F.1_g184550 Hydrangea macrophylla HOM05D000926 ORTHO05D000707 2.3e-07 58.9 80 37.5
Nn3g17603 Nelumbo nucifera HOM05D000926 ORTHO05D000707 2.3e-07 58.9 78 35.9
Potri.004G108800 Populus trichocarpa HOM05D000926 ORTHO05D000707 2.3e-07 58.9 80 37.5
Sabra04G0073800 Salix brachista HOM05D000926 ORTHO05D000707 2.3e-07 58.9 80 35.0
MELO3C018927.2 Cucumis melo HOM05D000926 ORTHO05D000707 3.0e-07 58.5 82 37.8
PSO063G3264 Papaver somniferum HOM05D000926 ORTHO05D000707 3.0e-07 58.5 91 36.3
PSO782G3113 Papaver somniferum HOM05D000926 ORTHO05D000707 3.0e-07 58.5 91 36.3
RcHm_v2.0_Chr2g0164151 Rosa chinensis HOM05D000926 ORTHO05D000707 3.0e-07 58.5 83 37.3
Sabra04G0074000 Salix brachista HOM05D000926 ORTHO05D000707 3.0e-07 58.5 78 37.2
CAN.G982.28 Capsicum annuum HOM05D019957 ORTHO05D000707 3.9e-07 58.2 86 36.0
MD17G1069200 Malus domestica HOM05D000926 ORTHO05D000707 3.9e-07 58.2 80 38.8
Psat3g193240 Pisum sativum HOM05D000926 ORTHO05D000707 3.9e-07 58.2 82 36.6
Ah.16g100760 Amaranthus hybridus HOM05D000926 ORTHO05D000707 5.1e-07 57.8 84 41.7
Carub.0004s0440 Capsella rubella HOM05D000926 ORTHO05D000707 5.1e-07 57.8 85 38.8
AUR62009442 Chenopodium quinoa HOM05D000926 ORTHO05D000368 5.1e-07 57.8 82 35.4
HanXRQChr09g0263271 Helianthus annuus HOM05D000926 ORTHO05D000707 5.1e-07 57.8 83 42.2
Psat1g064600 Pisum sativum HOM05D000926 ORTHO05D000707 5.1e-07 57.8 77 40.3
THA.LOC104803603 Tarenaya hassleriana HOM05D000926 ORTHO05D000707 5.1e-07 57.8 81 34.6
Aqoxy7G03167 Aquilegia oxysepala HOM05D000926 ORTHO05D000707 6.6e-07 57.4 87 39.1
MD09G1078900 Malus domestica HOM05D000926 ORTHO05D000707 6.6e-07 57.4 80 37.5
Medtr6g016480 Medicago truncatula HOM05D000926 ORTHO05D000707 6.6e-07 57.4 77 41.6
Nitab4.5_0002171g0020 Nicotiana tabacum HOM05D000926 ORTHO05D000707 6.6e-07 57.4 78 33.3
HPP92_005300 Vanilla planifolia HOM05D000926 ORTHO05D000707 6.6e-07 57.4 79 38.0
Dinv33888 Davidia involucrata HOM05D000926 ORTHO05D000707 8.7e-07 57.0 85 35.3
ECA232G3566 Erigeron canadensis HOM05D000926 ORTHO05D000707 8.7e-07 57.0 85 40.0
Lalb_Chr21g0318771 Lupinus albus HOM05D000926 ORTHO05D000707 8.7e-07 57.0 80 35.0
Oeu032853.1 Olea europaea HOM05D000926 ORTHO05D000707 8.7e-07 57.0 79 35.4
Psat3g193320 Pisum sativum HOM05D000926 ORTHO05D000707 8.7e-07 57.0 78 32.1
Sp4g03730 Schrenkiella parvula HOM05D000926 ORTHO05D000707 8.7e-07 57.0 84 41.7
Thecc.04G112900 Theobroma cacao HOM05D000926 ORTHO05D000707 8.7e-07 57.0 79 39.2
MSTRG.2959 Avicennia marina HOM05D000926 ORTHO05D000707 1.1e-06 56.6 81 34.6
CAN.G497.35 Capsicum annuum HOM05D000926 ORTHO05D000707 1.1e-06 56.6 79 35.4
CiPaw.08G003900 Carya illinoinensis HOM05D000926 ORTHO05D000707 1.1e-06 56.6 89 34.8
Ah.16g100770 Amaranthus hybridus HOM05D000926 ORTHO05D000707 1.5e-06 56.2 89 34.8
DCAR_002020 Daucus carota HOM05D000926 ORTHO05D000707 1.5e-06 56.2 80 40.0
Eucgr.J01439 Eucalyptus grandis HOM05D000926 ORTHO05D000707 1.5e-06 56.2 87 31.0
THA.LOC104805541 Tarenaya hassleriana HOM05D000926 ORTHO05D000707 1.5e-06 56.2 89 39.3
Lsat_1_v5_gn_4_174621 Lactuca sativa HOM05D000926 ORTHO05D000707 1.9e-06 55.8 88 36.4
Psat1g064720 Pisum sativum HOM05D000926 ORTHO05D000707 1.9e-06 55.8 78 42.3
Psat1g064800 Pisum sativum HOM05D000926 ORTHO05D000707 2.5e-06 55.5 78 42.3
Prupe.3G245300 Prunus persica HOM05D000926 ORTHO05D000707 2.5e-06 55.5 82 35.4
Solyc02g089450.1 Solanum lycopersicum HOM05D000926 ORTHO05D000707 2.5e-06 55.5 79 38.0
MELO3C018921.2 Cucumis melo HOM05D000926 ORTHO05D000707 3.3e-06 55.1 79 38.0
Gohir.D06G106200 Gossypium hirsutum HOM05D000926 ORTHO05D000707 3.3e-06 55.1 79 39.2
Solyc02g089460.1 Solanum lycopersicum HOM05D000926 ORTHO05D000707 3.3e-06 55.1 80 40.0
AT2G24762 Arabidopsis thaliana HOM05D000926 ORTHO05D000707 4.3e-06 54.7 85 40.0
AUR62023119 Chenopodium quinoa HOM05D000926 ORTHO05D000707 4.3e-06 54.7 79 36.7
Ca_15794_v3 Cicer arietinum L. HOM05D000926 ORTHO05D000707 4.3e-06 54.7 86 38.4
FAN02G4043 Fragaria x ananassa HOM05D000926 ORTHO05D000707 4.3e-06 54.7 79 34.2
Lj1g0010988 Lotus japonicus HOM05D000926 ORTHO05D000707 4.3e-06 54.7 85 34.1
Lalb_Chr14g0375401 Lupinus albus HOM05D000926 ORTHO05D000707 4.3e-06 54.7 86 37.2
PGR044G0045 Punica granatum HOM05D000926 ORTHO05D000707 4.3e-06 54.7 82 39.0
Sopen02g034200 Solanum pennellii HOM05D000926 ORTHO05D000707 4.3e-06 54.7 80 41.2
PGSC0003DMG400001479 Solanum tuberosum HOM05D000926 ORTHO05D000707 4.3e-06 54.7 84 34.5
PGSC0003DMG400029541 Solanum tuberosum HOM05D000926 ORTHO05D000707 4.3e-06 54.7 84 34.5
AL6G36590 Arabidopsis lyrata HOM05D000926 ORTHO05D000707 5.6e-06 54.3 81 34.6
Cc07_g04740 Coffea canephora HOM05D000926 ORTHO05D000707 5.6e-06 54.3 84 35.7
Gohir.D07G082400 Gossypium hirsutum HOM05D000926 ORTHO05D000707 5.6e-06 54.3 78 34.6
Gorai.001G088000 Gossypium raimondii HOM05D000926 ORTHO05D000707 5.6e-06 54.3 78 34.6
Nitab4.5_0001110g0150 Nicotiana tabacum HOM05D000926 ORTHO05D000707 5.6e-06 54.3 83 36.1
Nitab4.5_0005612g0020 Nicotiana tabacum HOM05D000926 ORTHO05D000707 5.6e-06 54.3 91 34.1
Peaxi162Scf00479g00093 Petunia axillaris HOM05D000926 ORTHO05D000707 5.6e-06 54.3 87 33.3
SalBow1G7500 Salvia bowleyana HOM05D000926 ORTHO05D000707 5.6e-06 54.3 77 37.7
Sopen02g034220 Solanum pennellii HOM05D000926 ORTHO05D000707 5.6e-06 54.3 85 31.8
MSTRG.2960 Avicennia marina HOM05D000926 ORTHO05D000707 7.3e-06 53.9 79 36.7
FAN05G2979 Fragaria x ananassa HOM05D000926 ORTHO05D000707 7.3e-06 53.9 83 34.9
Gohir.A13G211500 Gossypium hirsutum HOM05D000926 ORTHO05D000707 7.3e-06 53.9 90 32.2
PGSC0003DMG400001477 Solanum tuberosum HOM05D000926 ORTHO05D000707 7.3e-06 53.9 80 37.5
Aa31LG11G4120 Aethionema arabicum HOM05D000926 ORTHO05D000707 9.6e-06 53.5 81 33.3
Aqoxy3G03796 Aquilegia oxysepala HOM05D000926 ORTHO05D000707 9.6e-06 53.5 78 41.0
AL4G15740 Arabidopsis lyrata HOM05D000926 ORTHO05D000707 9.6e-06 53.5 89 39.3
EL10Ac2g04399 Beta vulgaris HOM05D000926 ORTHO05D000707 9.6e-06 53.5 78 32.1
ClCG07G016190 Citrullus lanatus HOM05D000926 ORTHO05D000707 9.6e-06 53.5 79 34.2
DCAR_026290 Daucus carota HOM05D000926 ORTHO05D000707 9.6e-06 53.5 77 36.4
Migut.H00568 Erythranthe guttata HOM05D000926 ORTHO05D000707 9.6e-06 53.5 80 33.8
FAN17G1743 Fragaria x ananassa HOM05D000926 ORTHO05D000707 9.6e-06 53.5 88 38.6
Gohir.D13G215500 Gossypium hirsutum HOM05D000926 ORTHO05D000707 9.6e-06 53.5 90 32.2
Gorai.013G245900 Gossypium raimondii HOM05D000926 ORTHO05D000707 9.6e-06 53.5 90 32.2
TPR.G15947 Trifolium pratense HOM05D000926 ORTHO05D000707 9.6e-06 53.5 78 42.3
TPR.G38905 Trifolium pratense HOM05D000926 ORTHO05D000707 9.6e-06 53.5 82 39.0


User provided reference genes

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