Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015511 Sechium edule HOM05D005900 ORTHO05D007306 2.1e-124 449.1 242 100.0
CsaV3_4G033440 Cucumis sativus L. HOM05D005900 ORTHO05D007306 1.4e-83 313.5 247 71.7
ClCG11G017800 Citrullus lanatus HOM05D005900 ORTHO05D007306 7.3e-77 291.2 246 67.9
MELO3C032361.2 Cucumis melo HOM05D005900 ORTHO05D007306 1.4e-46 190.7 181 65.7
Oeu055297.1 Olea europaea HOM05D005900 ORTHO05D007306 2.2e-44 183.3 231 51.5
CSS0005312 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 2.8e-44 183.0 237 49.8
Sabra01G0047700 Salix brachista HOM05D005900 ORTHO05D007306 6.5e-41 171.8 230 49.6
Hma1.2p1_1494F.1_g286930 Hydrangea macrophylla HOM05D005900 ORTHO05D007306 1.1e-40 171.0 243 48.6
CANSAT80G1771 Cannabis sativa HOM05D005900 ORTHO05D007306 4.7e-39 165.6 235 45.5
Dinv16498 Davidia involucrata HOM05D005900 ORTHO05D007306 1.4e-38 164.1 219 48.9
CANSAT80G1963 Cannabis sativa HOM05D005900 ORTHO05D007306 1.8e-38 163.7 230 45.7
Dinv35828 Davidia involucrata HOM05D005900 ORTHO05D007306 1.8e-38 163.7 233 45.5
MSTRG.22403 Avicennia marina HOM05D005900 ORTHO05D007306 2.3e-38 163.3 239 47.3
GSVIVG01001102001 Vitis vinifera HOM05D005900 ORTHO05D007306 5.1e-38 162.2 238 45.4
Nitab4.5_0000191g0220 Nicotiana tabacum HOM05D005900 ORTHO05D007306 8.8e-38 161.4 232 46.6
Nitab4.5_0000059g0460 Nicotiana tabacum HOM05D005900 ORTHO05D007306 1.1e-37 161.0 232 47.0
Atru.chr12.1436 Acer truncatum HOM05D005900 ORTHO05D007306 1.5e-37 160.6 230 47.8
Potri.001G068500 Populus trichocarpa HOM05D005900 ORTHO05D007306 4.4e-37 159.1 230 47.0
Migut.C01115 Erythranthe guttata HOM05D005900 ORTHO05D007306 7.4e-37 158.3 232 46.6
PGSC0003DMG400008953 Solanum tuberosum HOM05D005900 ORTHO05D007306 9.7e-37 157.9 232 46.6
DCAR_030841 Daucus carota HOM05D005900 ORTHO05D007306 3.7e-36 156.0 199 46.7
Solyc09g009850.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 6.3e-36 155.2 232 48.3
SGA_v2.0_scaffold154G37193 Striga asiatica HOM05D005900 ORTHO05D007306 6.3e-36 155.2 232 45.7
Cc04_g15880 Coffea canephora HOM05D005900 ORTHO05D007306 7.0e-35 151.8 246 41.5
Migut.C00405 Erythranthe guttata HOM05D005900 ORTHO05D007306 7.0e-35 151.8 231 48.1
vmacro15379 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 7.0e-35 151.8 273 41.4
Oeu001539.2 Olea europaea HOM05D005900 ORTHO05D007306 9.1e-35 151.4 294 41.5
Hund20854 Selenicereus undatus HOM05D005900 ORTHO05D007306 9.1e-35 151.4 227 47.1
Sopen09g004610 Solanum pennellii HOM05D005900 ORTHO05D007306 1.2e-34 151.0 232 46.1
TAR371G1211 Trochodendron aralioides HOM05D005900 ORTHO05D007306 1.2e-34 151.0 248 45.6
Ciclev10005823m.g Citrus clementina HOM05D005900 ORTHO05D007306 2.6e-34 149.8 232 46.1
SGA_v2.0_scaffold28G11983 Striga asiatica HOM05D005900 ORTHO05D007306 5.9e-34 148.7 232 44.4
TAR629G1598 Trochodendron aralioides HOM05D005900 ORTHO05D007306 5.9e-34 148.7 235 45.1
QL03p048972 Quercus lobata HOM05D005900 ORTHO05D007306 1.0e-33 147.9 244 43.0
Peaxi162Scf00698g00117 Petunia axillaris HOM05D005900 ORTHO05D007306 1.7e-33 147.1 231 43.3
RcHm_v2.0_Chr4g0428761 Rosa chinensis HOM05D005900 ORTHO05D007306 1.7e-33 147.1 238 43.3
PGR102G3094 Punica granatum HOM05D005900 ORTHO05D007306 2.2e-33 146.7 232 44.8
PGSC0003DMG400022718 Solanum tuberosum HOM05D005900 ORTHO05D007306 8.5e-33 144.8 234 43.6
MBI11_g07033_MAGBIO Magnolia biondii HOM05D005900 ORTHO05D007306 1.5e-32 144.1 243 43.6
Peaxi162Scf00079g01513 Petunia axillaris HOM05D005900 ORTHO05D007306 1.5e-32 144.1 259 42.9
Eucgr.B02910 Eucalyptus grandis HOM05D005900 ORTHO05D007306 1.9e-32 143.7 252 42.1
Solyc01g008760.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 7.2e-32 141.7 229 43.2
Haze_24259 Corylus avellana HOM05D005900 ORTHO05D007306 1.2e-31 141.0 240 44.6
TWI36G0396 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 8.0e-31 138.3 204 43.6
FAN07G0479 Fragaria x ananassa HOM05D005900 ORTHO05D007306 1.0e-30 137.9 232 40.5
Cfa011664 Carpinus fangiana HOM05D005900 ORTHO05D007306 1.8e-30 137.1 240 44.2
Eucgr.E01503 Eucalyptus grandis HOM05D005900 ORTHO05D007306 1.8e-30 137.1 247 42.1
FvH4_4g22530 Fragaria vesca HOM05D005900 ORTHO05D007306 3.0e-30 136.3 233 42.5
FAN12G4206 Fragaria x ananassa HOM05D005900 ORTHO05D007306 3.0e-30 136.3 233 42.5
FAN17G1441 Fragaria x ananassa HOM05D005900 ORTHO05D007306 3.0e-30 136.3 149 53.0
PSO170G6181 Papaver somniferum HOM05D005900 ORTHO05D007306 3.0e-30 136.3 179 46.9
Rhsim12G0016500 Rhododendron simsii HOM05D005900 ORTHO05D007306 4.0e-30 136.0 246 42.7
Cfa010215 Carpinus fangiana HOM05D005900 ORTHO05D007306 6.7e-30 135.2 238 45.0
Sc06g0007790 Simmondsia chinensis HOM05D005900 ORTHO05D007306 8.8e-30 134.8 240 43.3
TWI18G0365 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 8.8e-30 134.8 222 41.0
SalBow2G0170 Salvia bowleyana HOM05D005900 ORTHO05D007306 1.1e-29 134.4 217 44.2
Lsat_1_v5_gn_2_95001 Lactuca sativa HOM05D005900 ORTHO05D007306 3.3e-29 132.9 194 43.8
AUR62006518 Chenopodium quinoa HOM05D005900 ORTHO05D007306 9.7e-29 131.3 228 42.5
PSO017G3279 Papaver somniferum HOM05D005900 ORTHO05D007306 1.7e-28 130.6 179 44.7
COL.COLO4_27171 Corchorus olitorius HOM05D005900 ORTHO05D007306 2.2e-28 130.2 232 42.7
CiPaw.05G100400 Carya illinoinensis HOM05D005900 ORTHO05D007306 3.7e-28 129.4 222 43.2
Cpa.g.sc36.199 Carica papaya HOM05D005900 ORTHO05D007306 4.8e-28 129.0 217 42.4
CDE09G0879 Ceratophyllum demersum HOM05D005900 ORTHO05D007306 4.8e-28 129.0 209 39.2
AUR62025013 Chenopodium quinoa HOM05D005900 ORTHO05D007306 6.3e-28 128.6 228 40.8
vmacro01013 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 1.8e-27 127.1 290 36.9
CiPaw.03G184600 Carya illinoinensis HOM05D005900 ORTHO05D007306 2.4e-27 126.7 173 48.0
Os01g0259900 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 5.3e-27 125.6 242 40.9
arahy.Tifrunner.gnm1.ann1.UQH0GN Arachis hypogaea HOM05D005900 ORTHO05D007306 1.2e-26 124.4 245 39.6
arahy.Tifrunner.gnm1.ann1.5NZU5R Arachis hypogaea HOM05D005900 ORTHO05D007306 3.5e-26 122.9 241 38.2
Ca_13888_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 3.5e-26 122.9 205 37.6
Gohir.A01G020300 Gossypium hirsutum HOM05D005900 ORTHO05D007306 4.5e-26 122.5 190 43.7
Ca_23210_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 5.9e-26 122.1 226 36.3
Prupe.1G213900 Prunus persica HOM05D005900 ORTHO05D007306 5.9e-26 122.1 226 37.6
ECA238G4295 Erigeron canadensis HOM05D005900 ORTHO05D007306 1.0e-25 121.3 181 47.0
Psat4g204640 Pisum sativum HOM05D005900 ORTHO05D007306 2.2e-25 120.2 205 39.0
Os08g0422600 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 2.9e-25 119.8 228 40.4
Thecc.02G191100 Theobroma cacao HOM05D005900 ORTHO05D007306 2.9e-25 119.8 241 39.0
EL10Ac1g01696 Beta vulgaris HOM05D005900 ORTHO05D007306 5.0e-25 119.0 238 39.5
Zm00001eb127900 Zea mays HOM05D005900 ORTHO05D007306 5.0e-25 119.0 234 38.9
Gorai.002G021100 Gossypium raimondii HOM05D005900 ORTHO05D007306 1.5e-24 117.5 215 40.9
Gohir.D01G018900 Gossypium hirsutum HOM05D005900 ORTHO05D007306 5.5e-24 115.5 215 40.5
Lj3g0021746 Lotus japonicus HOM05D005900 ORTHO05D007306 5.5e-24 115.5 243 39.1
MD16G1142000 Malus domestica HOM05D005900 ORTHO05D007306 9.4e-24 114.8 225 42.2
Sp2g27740 Schrenkiella parvula HOM05D005900 ORTHO05D007306 2.1e-23 113.6 224 37.5
MD13G1131700 Malus domestica HOM05D005900 ORTHO05D007306 2.7e-23 113.2 215 42.3
Lalb_Chr15g0079851 Lupinus albus HOM05D005900 ORTHO05D007306 3.6e-23 112.8 239 38.1
VMungo0331G1117 Vigna mungo HOM05D005900 ORTHO05D007306 1.4e-22 110.9 237 39.7
BcaC03g18270 Brassica carinata HOM05D005900 ORTHO05D007306 2.6e-21 106.7 194 40.2
BcaB07g29751 Brassica carinata HOM05D005900 ORTHO05D007306 3.4e-21 106.3 204 38.7
THA.LOC104799437 Tarenaya hassleriana HOM05D005900 ORTHO05D007306 3.4e-21 106.3 200 40.5
A02p43400 Brassica napus HOM05D005900 ORTHO05D007306 7.5e-21 105.1 195 39.5
BcaC08g46818 Brassica carinata HOM05D005900 ORTHO05D007306 1.3e-20 104.4 141 44.0
C02p63500 Brassica napus HOM05D005900 ORTHO05D007306 1.3e-20 104.4 195 40.0
C03p61480 Brassica napus HOM05D005900 ORTHO05D007306 1.7e-20 104.0 228 36.0
BraA02t09265Z Brassica rapa HOM05D005900 ORTHO05D007306 1.7e-20 104.0 195 39.0
Aa31LG1G17260 Aethionema arabicum HOM05D005900 ORTHO05D007306 3.7e-20 102.8 224 38.4
Glyma.13G175800 Glycine max HOM05D005900 ORTHO05D007306 6.3e-20 102.1 231 38.1
BolC2t12415H Brassica oleracea HOM05D005900 ORTHO05D007306 8.3e-20 101.7 195 40.0
BolC6t39862H Brassica oleracea HOM05D005900 ORTHO05D007306 1.1e-19 101.3 154 40.9
Duzib052G0736 Durio zibethinus HOM05D005900 ORTHO05D007306 1.1e-19 101.3 250 38.4
Glyma.07G200400 Glycine max HOM05D005900 ORTHO05D007306 1.4e-19 100.9 234 37.6
Thhalv10004934m.g Eutrema salsugineum HOM05D005900 ORTHO05D007306 3.1e-19 99.8 210 37.6
CSS0033783 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 4.1e-19 99.4 180 43.3
VMungo0251G3272 Vigna mungo HOM05D005900 ORTHO05D007306 1.2e-18 97.8 235 35.3
Cc04_g15860 Coffea canephora HOM05D005900 ORTHO05D007306 2.0e-18 97.1 86 52.3
Medtr8g012410 Medicago truncatula HOM05D005900 ORTHO05D007306 2.0e-18 97.1 208 33.7
Phvul.002G231200 Phaseolus vulgaris HOM05D005900 ORTHO05D007306 2.7e-18 96.7 238 34.9
Aqoxy4G02969 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 3.5e-18 96.3 191 38.2
Ca_13890_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 1.3e-17 94.4 91 48.4
TPR.G16445 Trifolium pratense HOM05D005900 ORTHO05D007306 1.3e-17 94.4 239 33.5
BcaB04g19984 Brassica carinata HOM05D005900 ORTHO05D007306 3.8e-17 92.8 156 40.4
Lj6g0004130 Lotus japonicus HOM05D005900 ORTHO05D007306 4.2e-16 89.4 241 34.0
unitig_747.g21266 Utricularia gibba HOM05D005900 ORTHO05D007306 6.1e-15 85.5 208 34.6
AL8G42100 Arabidopsis lyrata HOM05D005900 ORTHO05D007306 5.2e-14 82.4 233 32.6
ATR0582G041 Amborella trichopoda HOM05D005900 ORTHO05D007306 8.8e-14 81.6 250 32.8
Manes.08G100300 Manihot esculenta HOM05D005900 ORTHO05D007306 3.4e-13 79.7 233 32.6
Atru.chr12.1335 Acer truncatum HOM05D005900 ORTHO05D007306 1.7e-12 77.4 74 52.7
Aqoxy83s001 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 4.9e-12 75.9 148 38.5
Aqoxy4G03322 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 1.4e-11 74.3 147 38.1
AT5G64680 Arabidopsis thaliana HOM05D005900 ORTHO05D007306 1.4e-11 74.3 151 33.8
Carub.0008s2548 Capsella rubella HOM05D005900 ORTHO05D007306 3.5e-10 69.7 178 34.8
Aqoxy2G04193 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 6.6e-09 65.5 132 37.9
Nn3g20876 Nelumbo nucifera HOM05D005900 ORTHO05D007306 8.9e-06 55.1 37 64.9


User provided reference genes

Program Settings