Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015508 Sechium edule HOM05D006386 ORTHO05D007575 1.2e-127 459.9 238 100.0
ClCG06G015230 Citrullus lanatus HOM05D006386 ORTHO05D007575 1.2e-100 370.2 240 83.3
CsaV3_1G003130 Cucumis sativus L. HOM05D006386 ORTHO05D007575 1.5e-74 283.5 247 69.6
GSVIVG01008195001 Vitis vinifera HOM05D006386 ORTHO05D007575 1.4e-67 260.4 245 56.7
RcHm_v2.0_Chr7g0184161 Rosa chinensis HOM05D006386 ORTHO05D007575 1.4e-64 250.4 245 53.9
COL.COLO4_08656 Corchorus olitorius HOM05D006386 ORTHO05D007575 7.0e-64 248.1 245 57.1
FAN08G0928 Fragaria x ananassa HOM05D006386 ORTHO05D007575 2.0e-63 246.5 245 53.5
FAN13G1489 Fragaria x ananassa HOM05D006386 ORTHO05D007575 1.0e-62 244.2 245 53.1
FvH4_5g13000 Fragaria vesca HOM05D006386 ORTHO05D007575 1.7e-62 243.4 245 52.7
CANSAT80G2620 Cannabis sativa HOM05D006386 ORTHO05D007575 2.3e-62 243.0 245 54.7
Dinv36853 Davidia involucrata HOM05D006386 ORTHO05D007575 2.3e-62 243.0 245 53.5
Ciclev10021913m.g Citrus clementina HOM05D006386 ORTHO05D007575 2.9e-62 242.7 245 54.3
Duzib068G0691 Durio zibethinus HOM05D006386 ORTHO05D007575 5.0e-62 241.9 245 54.7
Thecc.03G113300 Theobroma cacao HOM05D006386 ORTHO05D007575 6.6e-62 241.5 245 55.1
QL10p021984 Quercus lobata HOM05D006386 ORTHO05D007575 1.1e-61 240.7 249 57.0
FAN18G3466 Fragaria x ananassa HOM05D006386 ORTHO05D007575 2.5e-61 239.6 245 51.8
Gorai.007G040700 Gossypium raimondii HOM05D006386 ORTHO05D007575 2.5e-61 239.6 245 55.9
Cfa019518 Carpinus fangiana HOM05D006386 ORTHO05D007575 5.6e-61 238.4 245 55.9
Gohir.D11G038000 Gossypium hirsutum HOM05D006386 ORTHO05D007575 1.2e-60 237.3 245 55.1
Atru.chr9.671 Acer truncatum HOM05D006386 ORTHO05D007575 2.8e-60 236.1 243 52.3
CSS0007083 Camellia sinensis var. sinensis HOM05D006386 ORTHO05D007575 6.1e-60 235.0 245 53.9
MD14G1218500 Malus domestica HOM05D006386 ORTHO05D007575 6.8e-59 231.5 245 51.4
TWI81G0025 Tripterygium wilfordii HOM05D006386 ORTHO05D007575 6.8e-59 231.5 245 54.7
Gohir.A11G034600 Gossypium hirsutum HOM05D006386 ORTHO05D007575 2.6e-58 229.6 246 54.1
Hund02537 Selenicereus undatus HOM05D006386 ORTHO05D007575 2.6e-58 229.6 241 53.5
CiPaw.16G081700 Carya illinoinensis HOM05D006386 ORTHO05D007575 4.4e-58 228.8 244 53.7
Nitab4.5_0000646g0180 Nicotiana tabacum HOM05D006386 ORTHO05D007575 4.4e-58 228.8 244 49.6
Lj9A435T83 Lonicera japonica HOM05D006386 ORTHO05D007575 5.8e-58 228.4 244 51.2
TAR629G0047 Trochodendron aralioides HOM05D002187 ORTHO05D002243 7.5e-58 228.0 192 62.5
PGSC0003DMG400024511 Solanum tuberosum HOM05D006386 ORTHO05D007575 2.2e-57 226.5 244 49.6
THA.LOC104819388 Tarenaya hassleriana HOM05D006386 ORTHO05D007575 1.1e-56 224.2 248 51.2
Potri.015G055500 Populus trichocarpa HOM05D006386 ORTHO05D007575 1.4e-56 223.8 245 52.2
AUR62032161 Chenopodium quinoa HOM05D006386 ORTHO05D007575 1.2e-55 220.7 243 48.6
Nn3g17620 Nelumbo nucifera HOM05D006386 ORTHO05D007575 1.2e-55 220.7 241 52.3
Sopen03g033610 Solanum pennellii HOM05D006386 ORTHO05D007575 3.5e-55 219.2 244 48.4
Actinidia36923 Actinidia chinensis HOM05D006386 ORTHO05D007575 4.6e-55 218.8 245 49.4
Eucgr.K02638 Eucalyptus grandis HOM05D006386 ORTHO05D007575 1.7e-54 216.9 244 51.6
Solyc03g114520.3 Solanum lycopersicum HOM05D006386 ORTHO05D007575 2.3e-54 216.5 244 47.5
AL7G44320 Arabidopsis lyrata HOM05D006386 ORTHO05D007575 3.0e-54 216.1 245 51.0
Manes.01G023400 Manihot esculenta HOM05D006386 ORTHO05D007575 3.0e-54 216.1 242 48.8
Nitab4.5_0004342g0080 Nicotiana tabacum HOM05D006386 ORTHO05D007575 3.0e-54 216.1 244 48.0
Glyma.17G083800 Glycine max HOM05D006386 ORTHO05D007575 1.5e-53 213.8 244 50.0
Lalb_Chr13g0302571 Lupinus albus HOM05D006386 ORTHO05D007575 3.3e-53 212.6 243 50.6
PGR044G0997 Punica granatum HOM05D006386 ORTHO05D007575 7.3e-53 211.5 233 51.9
VMungo1215G2864 Vigna mungo HOM05D006386 ORTHO05D007575 1.2e-52 210.7 244 49.2
Sabra15G0080700 Salix brachista HOM05D006386 ORTHO05D007575 2.1e-52 209.9 271 46.1
Sc04g0004070 Simmondsia chinensis HOM05D006386 ORTHO05D007575 4.7e-52 208.8 252 46.8
Phvul.002G142200 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 6.2e-52 208.4 244 49.2
CARHR217490 Cardamine hirsuta HOM05D006386 ORTHO05D007575 1.8e-51 206.8 245 48.6
Cc04_g07860 Coffea canephora HOM05D006386 ORTHO05D007575 5.2e-51 205.3 243 47.3
Prupe.5G212600 Prunus persica HOM05D006386 ORTHO05D007575 5.2e-51 205.3 243 49.8
Ca_21735_v3 Cicer arietinum L. HOM05D006386 ORTHO05D007575 6.8e-51 204.9 241 49.4
Hma1.2p1_0340F.1_g130200 Hydrangea macrophylla HOM05D006386 ORTHO05D007575 6.8e-51 204.9 244 47.5
Phvul.003G180600 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 1.2e-50 204.1 242 48.3
EL10Ac9g20981 Beta vulgaris HOM05D006386 ORTHO05D007575 1.5e-50 203.8 244 47.1
Carub.0007s3127 Capsella rubella HOM05D006386 ORTHO05D007575 2.0e-50 203.4 251 47.0
Lj6g0003397 Lotus japonicus HOM05D006386 ORTHO05D007575 2.0e-50 203.4 244 46.7
AT5G35520 Arabidopsis thaliana HOM05D006386 ORTHO05D007575 2.6e-50 203.0 245 48.6
Medtr4g112610 Medicago truncatula HOM05D006386 ORTHO05D007575 3.4e-50 202.6 248 48.4
TPR.G23873 Trifolium pratense HOM05D006386 ORTHO05D007575 9.8e-50 201.1 246 49.2
Thhalv10003465m.g Eutrema salsugineum HOM05D006386 ORTHO05D007575 1.3e-49 200.7 242 48.3
Glyma.05G016300 Glycine max HOM05D006386 ORTHO05D007575 1.7e-49 200.3 235 49.4
SalBow1G4471 Salvia bowleyana HOM05D006386 ORTHO05D007575 1.7e-49 200.3 245 44.5
BcaB06g26945 Brassica carinata HOM05D006386 ORTHO05D007575 4.9e-49 198.7 241 49.0
Medtr4g112830 Medicago truncatula HOM05D006386 ORTHO05D007575 6.4e-49 198.4 251 47.8
Sp7g06840 Schrenkiella parvula HOM05D006386 ORTHO05D007575 1.4e-48 197.2 246 49.6
Oeu010193.1 Olea europaea HOM05D006386 ORTHO05D007575 5.4e-48 195.3 241 46.9
vmacro17651 Vaccinium macrocarpon HOM05D006386 ORTHO05D007575 7.0e-48 194.9 178 59.0
HanXRQChr16g0502011 Helianthus annuus HOM05D006386 ORTHO05D007575 1.6e-47 193.7 244 46.7
Lsat_1_v5_gn_4_112761 Lactuca sativa HOM05D006386 ORTHO05D007575 2.1e-47 193.4 245 44.9
arahy.Tifrunner.gnm1.ann1.3Z7JIG Arachis hypogaea HOM05D006386 ORTHO05D007575 3.5e-47 192.6 237 49.8
BcaC02g09476 Brassica carinata HOM05D006386 ORTHO05D007575 1.3e-46 190.7 244 48.4
BolC4t25901H Brassica oleracea HOM05D006386 ORTHO05D007575 2.3e-46 189.9 244 48.4
Aa31LG4G9830 Aethionema arabicum HOM05D006386 ORTHO05D007575 3.0e-46 189.5 244 45.9
C04p43230 Brassica napus HOM05D006386 ORTHO05D007575 3.9e-46 189.1 243 48.1
arahy.Tifrunner.gnm1.ann1.HL5ANR Arachis hypogaea HOM05D006386 ORTHO05D007575 2.5e-45 186.4 237 48.1
MSTRG.4502 Avicennia marina HOM05D006386 ORTHO05D007575 3.6e-44 182.6 239 43.9
Lsat_1_v5_gn_4_112801 Lactuca sativa HOM05D006386 ORTHO05D007575 4.7e-44 182.2 207 47.8
Migut.D01482 Erythranthe guttata HOM05D006386 ORTHO05D007575 5.8e-42 175.3 244 41.0
arahy.Tifrunner.gnm1.ann1.X9R15Y Arachis hypogaea HOM05D006386 ORTHO05D007575 2.2e-41 173.3 260 43.8
Psat4g044400 Pisum sativum HOM05D006386 ORTHO05D007575 2.2e-41 173.3 247 45.3
SGA_v2.0_scaffold42G16024 Striga asiatica HOM05D006386 ORTHO05D007575 6.4e-41 171.8 224 45.5
ECA246G4419 Erigeron canadensis HOM05D006386 ORTHO05D007575 3.2e-40 169.5 243 43.2
CDE02G3865 Ceratophyllum demersum HOM05D006386 ORTHO05D007575 4.1e-40 169.1 211 44.5
Peaxi162Scf00119g00118 Petunia axillaris HOM05D006386 ORTHO05D007575 1.2e-39 167.5 249 41.4
unitig_62.g23762 Utricularia gibba HOM05D006386 ORTHO05D007575 1.6e-39 167.2 239 44.4
PSO017G3209 Papaver somniferum HOM05D006386 ORTHO05D007575 3.5e-39 166.0 208 44.2
ECA232G1078 Erigeron canadensis HOM05D006386 ORTHO05D007575 6.0e-39 165.2 244 42.2
PSO478G3500 Papaver somniferum HOM05D006386 ORTHO05D007575 1.3e-38 164.1 209 45.5
A04p09730 Brassica napus HOM05D006386 ORTHO05D007575 3.0e-38 162.9 238 44.1
BraA04t16635Z Brassica rapa HOM05D006386 ORTHO05D007575 1.1e-37 161.0 244 43.0
ATR0730G046 Amborella trichopoda HOM05D006386 ORTHO05D007575 2.4e-35 153.3 243 40.3
SHI18989 Sapria himalayana HOM05D006386 ORTHO05D007575 3.1e-35 152.9 179 45.3
MD06G1208100 Malus domestica HOM05D006386 ORTHO05D007575 3.4e-34 149.4 238 42.4
MSTRG.4503 Avicennia marina HOM05D006386 ORTHO05D007575 4.9e-33 145.6 174 45.4
Aqoxy6G00629 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 6.4e-33 145.2 237 39.2
Actinidia33576 Actinidia chinensis HOM05D006386 ORTHO05D007575 5.4e-32 142.1 260 38.5
HPP92_015441 Vanilla planifolia HOM05D006386 ORTHO05D007575 7.8e-31 138.3 205 40.5
CAN.G982.14 Capsicum annuum HOM05D006386 ORTHO05D007575 1.8e-27 127.1 138 50.0
Nitab4.5_0005402g0030 Nicotiana tabacum HOM05D002295 ORTHO05D007575 3.1e-27 126.3 213 39.0
arahy.Tifrunner.gnm1.ann1.7DA3AY Arachis hypogaea HOM05D006386 ORTHO05D007575 9.0e-27 124.8 240 40.0
MBI10_g16789_MAGBIO Magnolia biondii HOM05D006386 ORTHO05D007575 1.5e-26 124.0 171 42.1
Aqoxy3G00630 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 9.3e-24 114.8 239 35.1
Cpa.g.sc53.22 Carica papaya HOM05D006386 ORTHO05D007575 5.1e-22 109.0 145 47.6
Cpa.g.sc53.23 Carica papaya HOM05D006386 ORTHO05D007575 5.6e-21 105.5 76 67.1
Os02g0620100 Oryza sativa ssp. japonica HOM05D006386 ORTHO05D007575 5.6e-21 105.5 246 32.1
Zm00001eb433940 Zea mays HOM05D006386 ORTHO05D007575 3.6e-20 102.8 213 32.9
MELO3C028557.2 Cucumis melo HOM05D006386 ORTHO05D007575 8.1e-20 101.7 60 85.0
TWI81G0622 Tripterygium wilfordii HOM05D006386 ORTHO05D007575 9.0e-19 98.2 146 46.6
Zm00001eb065850 Zea mays HOM05D006386 ORTHO05D007575 1.3e-17 94.4 196 33.2
AUR62036917 Chenopodium quinoa HOM05D006386 ORTHO05D007575 1.7e-17 94.0 135 40.7
Actinidia27067 Actinidia chinensis HOM05D006386 ORTHO05D007575 1.9e-13 80.5 58 67.2
DCAR_029598 Daucus carota HOM05D006386 ORTHO05D007575 1.9e-13 80.5 139 38.1
MELO3C027390.2 Cucumis melo HOM05D006386 ORTHO05D007575 2.4e-11 73.6 58 67.2
Ca_24277_v3 Cicer arietinum L. HOM05D006386 ORTHO05D007575 9.0e-11 71.6 107 45.8
Gorai.N008500 Gossypium raimondii HOM05D006386 ORTHO05D007575 1.0e-09 68.2 38 71.1
Gorai.007G248400 Gossypium raimondii HOM05D006386 ORTHO05D007575 3.8e-09 66.2 37 70.3
Rhsim08G0139600 Rhododendron simsii HOM05D006386 ORTHO05D007575 2.5e-08 63.5 39 74.4
Aqoxy6G02623 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 4.2e-08 62.8 105 39.0


User provided reference genes

Program Settings