Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 5.5e-116 421.0 218 100.0
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 2.1e-91 339.3 219 80.8
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 1.7e-88 329.7 219 80.4
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 5.1e-77 291.6 231 70.6
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 5.8e-73 278.1 218 67.4
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 5.4e-71 271.6 219 67.1
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 7.1e-71 271.2 218 65.6
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 6.0e-70 268.1 218 65.1
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 6.0e-70 268.1 218 64.7
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 1.0e-69 267.3 219 67.6
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.7e-69 266.5 218 64.7
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.7e-69 266.5 218 64.7
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 3.0e-69 265.8 218 65.6
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 3.0e-69 265.8 219 64.4
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 5.1e-69 265.0 218 65.1
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 5.1e-69 265.0 218 65.1
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 7.3e-68 261.2 169 76.9
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 7.3e-68 261.2 220 65.0
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 9.6e-68 260.8 206 66.5
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 1.3e-67 260.4 222 63.5
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 1.3e-67 260.4 221 62.9
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 2.1e-67 259.6 218 66.5
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 3.6e-67 258.8 220 62.3
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 6.2e-67 258.1 220 62.3
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 8.1e-67 257.7 221 66.5
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 1.4e-66 256.9 219 62.1
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 1.8e-66 256.5 221 61.1
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 3.1e-66 255.8 221 62.9
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 5.3e-66 255.0 220 64.5
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 5.3e-66 255.0 219 61.6
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 9.0e-66 254.2 218 61.9
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 1.2e-65 253.8 236 61.0
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 1.5e-65 253.4 206 67.5
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 1.5e-65 253.4 225 61.8
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 2.6e-65 252.7 222 63.5
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 5.8e-65 251.5 218 64.2
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 5.8e-65 251.5 221 61.5
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 5.8e-65 251.5 222 63.5
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 9.9e-65 250.8 234 61.5
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 9.9e-65 250.8 222 62.6
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 1.3e-64 250.4 192 69.8
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 1.3e-64 250.4 221 62.4
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 1.3e-64 250.4 221 62.4
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 1.7e-64 250.0 158 78.5
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 1.7e-64 250.0 221 62.0
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 2.2e-64 249.6 149 81.2
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 2.9e-64 249.2 232 61.2
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 4.9e-64 248.4 219 62.6
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 6.4e-64 248.1 226 59.7
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 6.4e-64 248.1 219 60.3
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 1.4e-63 246.9 218 63.8
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 1.9e-63 246.5 218 62.8
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 3.2e-63 245.7 226 62.8
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 5.4e-63 245.0 208 61.1
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 7.1e-63 244.6 218 62.4
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 9.3e-63 244.2 227 62.1
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 1.2e-62 243.8 218 61.0
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 3.5e-62 242.3 149 79.2
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 3.5e-62 242.3 220 62.3
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 4.6e-62 241.9 218 61.0
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 4.6e-62 241.9 226 60.2
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 6.0e-62 241.5 155 75.5
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 6.0e-62 241.5 227 56.8
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 1.0e-61 240.7 218 60.1
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.3e-61 240.4 149 77.9
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 1.8e-61 240.0 147 77.6
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 1.8e-61 240.0 218 60.6
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 1.8e-61 240.0 152 75.0
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 3.9e-61 238.8 174 67.8
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 1.5e-60 236.9 152 76.3
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 7.4e-60 234.6 218 61.5
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 2.1e-59 233.0 145 81.4
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 3.6e-59 232.3 159 70.4
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 6.2e-59 231.5 152 77.6
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 1.4e-58 230.3 152 73.0
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 5.3e-58 228.4 150 72.7
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 2.0e-57 226.5 130 85.4
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 3.4e-57 225.7 206 59.2
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 4.5e-57 225.3 167 68.9
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 7.6e-57 224.6 222 59.9
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 2.9e-56 222.6 211 62.1
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 1.4e-55 220.3 151 71.5
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 6.0e-54 214.9 200 62.0
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 1.3e-53 213.8 151 67.5
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 3.0e-53 212.6 154 68.2
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 3.0e-53 212.6 222 56.8
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 3.0e-53 212.6 128 79.7
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 1.5e-52 210.3 182 61.0
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 2.5e-52 209.5 150 68.0
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 2.5e-52 209.5 150 68.0
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 2.5e-52 209.5 202 56.4
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 5.6e-52 208.4 155 67.7
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 2.8e-51 206.1 177 57.1
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 3.7e-51 205.7 151 65.6
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 6.2e-51 204.9 240 51.7
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 6.2e-51 204.9 152 67.1
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 1.4e-50 203.8 154 66.9
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 5.8e-49 198.4 156 60.9
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 3.2e-47 192.6 109 86.2
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 6.7e-45 184.9 109 81.7
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 3.3e-44 182.6 154 57.8
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 1.8e-42 176.8 110 80.0
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 1.1e-39 167.5 175 57.7
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 1.2e-33 147.5 153 53.6
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 1.1e-31 141.0 159 53.5
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 4.2e-31 139.0 156 55.1
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 7.2e-31 138.3 72 90.3
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 7.2e-31 138.3 153 52.3
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 2.1e-30 136.7 169 50.9
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 4.6e-30 135.6 100 62.0
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 2.0e-28 130.2 174 39.7
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 4.7e-22 109.0 68 75.0
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 4.7e-22 109.0 68 75.0
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 3.8e-16 89.4 58 69.0
QL06p051391 Quercus lobata HOM05D006610 ORTHO05D008447 1.4e-13 80.9 120 42.5
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 3.3e-12 76.3 52 69.2


User provided reference genes

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