Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015494 Sechium edule HOM05D006725 ORTHO05D008223 8.5e-97 357.1 188 100.0
ClCG08G017310 Citrullus lanatus HOM05D006725 ORTHO05D008223 1.2e-79 300.1 183 84.7
CsaV3_2G025320 Cucumis sativus L. HOM05D006725 ORTHO05D008223 8.0e-71 270.8 184 76.6
PGR102G0799 Punica granatum HOM05D006725 ORTHO05D008223 3.3e-56 222.2 163 68.7
RcHm_v2.0_Chr4g0431131 Rosa chinensis HOM05D006725 ORTHO05D008223 4.3e-56 221.9 186 64.5
Dinv14799 Davidia involucrata HOM05D006725 ORTHO05D008223 2.8e-55 219.2 189 61.9
TAR374G1568 Trochodendron aralioides HOM05D006725 ORTHO05D008223 1.4e-54 216.9 184 64.7
Prupe.1G233300 Prunus persica HOM05D006725 ORTHO05D008223 5.2e-54 214.9 188 62.2
MD16G1111700 Malus domestica HOM05D006725 ORTHO05D008223 6.8e-54 214.5 185 63.2
Duzib248G0208 Durio zibethinus HOM05D006725 ORTHO05D008223 1.2e-53 213.8 187 61.0
Thecc.02G274200 Theobroma cacao HOM05D006725 ORTHO05D008223 2.6e-53 212.6 187 60.4
MD13G1112100 Malus domestica HOM05D006725 ORTHO05D008223 7.5e-53 211.1 187 61.5
CiPaw.05G115200 Carya illinoinensis HOM05D006725 ORTHO05D008223 1.3e-52 210.3 187 59.4
Ca_16483_v3 Cicer arietinum L. HOM05D006725 ORTHO05D008223 1.3e-52 210.3 183 61.2
COL.COLO4_23620 Corchorus olitorius HOM05D006725 ORTHO05D008223 2.2e-52 209.5 187 59.4
TWI18G0344 Tripterygium wilfordii HOM05D006725 ORTHO05D008223 2.2e-52 209.5 189 58.2
Nn4g22406 Nelumbo nucifera HOM05D006725 ORTHO05D008223 2.9e-52 209.1 185 60.5
TPR.G22435 Trifolium pratense HOM05D006725 ORTHO05D008223 2.9e-52 209.1 185 60.0
Actinidia08088 Actinidia chinensis HOM05D006725 ORTHO05D008223 3.7e-52 208.8 189 58.7
Glyma.11G248100 Glycine max HOM05D006725 ORTHO05D008223 8.3e-52 207.6 164 63.4
Gohir.D02G152500 Gossypium hirsutum HOM05D006725 ORTHO05D008223 1.4e-51 206.8 174 60.3
CSS0023056 Camellia sinensis var. sinensis HOM05D006725 ORTHO05D008223 2.4e-51 206.1 186 56.5
Gorai.005G171500 Gossypium raimondii HOM05D006725 ORTHO05D008223 7.0e-51 204.5 174 59.8
Potri.008G105700 Populus trichocarpa HOM05D006725 ORTHO05D008223 9.2e-51 204.1 185 58.4
FAN22G0294 Fragaria x ananassa HOM05D006725 ORTHO05D008223 1.6e-50 203.4 196 58.7
FAN12G1259 Fragaria x ananassa HOM05D006725 ORTHO05D008223 2.0e-50 203.0 196 58.7
Phvul.001G259500 Phaseolus vulgaris HOM05D006725 ORTHO05D008223 2.7e-50 202.6 178 59.0
Ciclev10032688m.g Citrus clementina HOM05D006725 ORTHO05D008223 1.0e-49 200.7 185 57.8
Gohir.A03G128700 Gossypium hirsutum HOM05D006725 ORTHO05D008223 1.0e-49 200.7 174 59.2
THA.LOC104825521 Tarenaya hassleriana HOM05D006725 ORTHO05D008223 1.7e-49 199.9 194 58.8
Glyma.18G009100 Glycine max HOM05D006725 ORTHO05D008223 2.3e-49 199.5 143 67.8
CANSAT56G1091 Cannabis sativa HOM05D006725 ORTHO05D008223 6.6e-49 198.0 174 60.3
Aqoxy5G03519 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 8.6e-49 197.6 188 58.0
Manes.13G015700 Manihot esculenta HOM05D006725 ORTHO05D008223 1.1e-48 197.2 162 63.6
QL03p054759 Quercus lobata HOM05D006725 ORTHO05D008223 3.3e-48 195.7 182 57.7
Sopen05g009780 Solanum pennellii HOM05D006725 ORTHO05D008223 3.3e-48 195.7 174 60.3
Atru.chr11.2260 Acer truncatum HOM05D006725 ORTHO05D008223 4.3e-48 195.3 187 58.3
MELO3C010728.2 Cucumis melo HOM05D006725 ORTHO05D008223 5.6e-48 194.9 130 76.9
Atru.chr11.2245 Acer truncatum HOM05D006725 ORTHO05D008223 7.3e-48 194.5 187 58.3
Solyc05g014650.2 Solanum lycopersicum HOM05D006725 ORTHO05D008223 1.2e-47 193.7 174 59.8
Cfa009314 Carpinus fangiana HOM05D006725 ORTHO05D008223 2.8e-47 192.6 184 59.2
Medtr3g085720 Medicago truncatula HOM05D006725 ORTHO05D008223 2.8e-47 192.6 174 57.5
arahy.Tifrunner.gnm1.ann1.245RAI Arachis hypogaea HOM05D006725 ORTHO05D008223 1.1e-46 190.7 182 58.2
vmacro01086 Vaccinium macrocarpon HOM05D006725 ORTHO05D008223 1.4e-46 190.3 174 56.9
HPP92_021374 Vanilla planifolia HOM05D006725 ORTHO05D008223 1.8e-46 189.9 151 60.3
Peaxi162Scf00128g00835 Petunia axillaris HOM05D006725 ORTHO05D008223 2.3e-46 189.5 189 57.7
Rhsim12G0035000 Rhododendron simsii HOM05D006725 ORTHO05D008223 8.9e-46 187.6 223 47.5
EL10Ac6g13437 Beta vulgaris HOM05D006725 ORTHO05D008223 1.5e-45 186.8 182 53.3
Lsat_1_v5_gn_4_2821 Lactuca sativa HOM05D006725 ORTHO05D008223 9.8e-45 184.1 183 53.6
Haze_12368 Corylus avellana HOM05D006725 ORTHO05D008223 2.9e-44 182.6 221 50.2
Eucgr.B03461 Eucalyptus grandis HOM05D006725 ORTHO05D008223 4.9e-44 181.8 195 52.8
Aqoxy5G03514 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 1.1e-43 180.6 155 60.6
HanXRQChr17g0569291 Helianthus annuus HOM05D006725 ORTHO05D008223 1.1e-43 180.6 190 53.2
PSO782G3390 Papaver somniferum HOM05D006725 ORTHO05D008223 1.1e-43 180.6 190 53.7
Lj3g0011418 Lotus japonicus HOM05D006725 ORTHO05D008223 1.9e-43 179.9 184 53.3
PSO063G2169 Papaver somniferum HOM05D006725 ORTHO05D008223 1.9e-43 179.9 194 55.2
unitig_749.g13304 Utricularia gibba HOM05D006725 ORTHO05D008223 3.2e-43 179.1 136 64.0
AUR62005570 Chenopodium quinoa HOM05D006725 ORTHO05D008223 1.6e-42 176.8 214 48.1
Psat5g094640 Pisum sativum HOM05D006725 ORTHO05D008223 3.5e-42 175.6 140 61.4
SGA_v2.0_scaffold46G17392 Striga asiatica HOM05D006725 ORTHO05D008223 3.5e-42 175.6 203 46.8
Carub.0002s1395 Capsella rubella HOM05D006725 ORTHO05D008223 7.8e-42 174.5 192 53.1
Lalb_Chr11g0075681 Lupinus albus HOM05D006725 ORTHO05D008223 1.0e-41 174.1 179 54.7
arahy.Tifrunner.gnm1.ann1.ZVR9LL Arachis hypogaea HOM05D006725 ORTHO05D008223 1.3e-41 173.7 147 60.5
AL2G26280 Arabidopsis lyrata HOM05D006725 ORTHO05D008223 1.7e-41 173.3 188 53.7
Hund06064 Selenicereus undatus HOM05D006725 ORTHO05D008223 3.0e-41 172.6 183 52.5
Migut.K00702 Erythranthe guttata HOM05D006725 ORTHO05D008223 2.5e-40 169.5 179 48.6
ATR0609G130 Amborella trichopoda HOM05D006725 ORTHO05D008223 7.3e-40 167.9 143 57.3
Lj3A1064T102 Lonicera japonica HOM05D006725 ORTHO05D008223 7.3e-40 167.9 173 52.0
SalBow2G1482 Salvia bowleyana HOM05D006725 ORTHO05D008223 1.2e-39 167.2 193 48.7
AT1G67620 Arabidopsis thaliana HOM05D006725 ORTHO05D008223 1.6e-39 166.8 188 51.6
Os12g0241100 Oryza sativa ssp. japonica HOM05D006725 ORTHO05D008223 3.6e-39 165.6 158 53.8
Sabra08G0079700 Salix brachista HOM05D006725 ORTHO05D008223 3.6e-39 165.6 192 50.5
Zm00001eb133570 Zea mays HOM05D006725 ORTHO05D008223 3.6e-39 165.6 174 50.0
Nitab4.5_0000581g0080 Nicotiana tabacum HOM05D006725 ORTHO05D008223 4.7e-39 165.2 183 51.9
DCAR_007015 Daucus carota HOM05D006725 ORTHO05D008223 8.1e-39 164.5 170 51.8
CARHR060190 Cardamine hirsuta HOM05D006725 ORTHO05D008223 1.8e-38 163.3 186 51.6
Thhalv10019173m.g Eutrema salsugineum HOM05D006725 ORTHO05D008223 1.8e-38 163.3 195 51.8
GSVIVG01010346001 Vitis vinifera HOM05D006725 ORTHO05D008223 1.2e-37 160.6 105 75.2
BcaB03g15182 Brassica carinata HOM05D006725 ORTHO05D008223 4.4e-37 158.7 189 50.8
A07p34140 Brassica napus HOM05D006725 ORTHO05D008223 8.3e-36 154.5 193 50.8
BraA07t31044Z Brassica rapa HOM05D006725 ORTHO05D008223 1.9e-35 153.3 200 49.5
BolC6t39176H Brassica oleracea HOM05D006725 ORTHO05D008223 2.4e-35 152.9 189 49.7
BraA07t31040Z Brassica rapa HOM05D006725 ORTHO05D008223 2.4e-35 152.9 202 50.0
BcaC08g46171 Brassica carinata HOM05D006725 ORTHO05D008223 7.1e-35 151.4 189 49.2
C06p42630 Brassica napus HOM05D006725 ORTHO05D008223 7.1e-35 151.4 189 49.2
Aa31LG4G12010 Aethionema arabicum HOM05D006725 ORTHO05D008223 7.8e-34 147.9 181 47.5
CDE09G0294 Ceratophyllum demersum HOM05D006725 ORTHO05D008223 3.9e-33 145.6 106 67.9
Sc04g0004650 Simmondsia chinensis HOM05D006725 ORTHO05D008223 1.2e-29 134.0 152 49.3
Cc11_g16590 Coffea canephora HOM05D006725 ORTHO05D008223 1.7e-25 120.2 83 66.3
AUR62024160 Chenopodium quinoa HOM05D006725 ORTHO05D008223 2.8e-23 112.8 117 50.4
Nitab4.5_0000240g0060 Nicotiana tabacum HOM05D006725 ORTHO05D008223 1.1e-22 110.9 83 65.1
VMungo1383G0611 Vigna mungo HOM05D006725 ORTHO05D008223 1.1e-22 110.9 179 42.5
ECA234G0356 Erigeron canadensis HOM05D006725 ORTHO05D008223 1.4e-22 110.5 86 62.8
arahy.Tifrunner.gnm1.ann1.GPZA99 Arachis hypogaea HOM05D006725 ORTHO05D008223 1.8e-22 110.2 132 49.2
SalBow3G4645 Salvia bowleyana HOM05D006725 ORTHO05D008223 1.2e-21 107.5 82 61.0
RcHm_v2.0_Chr1g0343341 Rosa chinensis HOM05D006725 ORTHO05D008223 2.6e-21 106.3 72 70.8
RcHm_v2.0_Chr7g0198741 Rosa chinensis HOM05D006725 ORTHO05D008223 1.3e-20 104.0 76 65.8
FvH4_4g24330 Fragaria vesca HOM05D006725 ORTHO05D008223 6.4e-20 101.7 100 58.0
SMO141G0262 Selaginella moellendorffii HOM05D006725 ORTHO05D008223 2.4e-19 99.8 105 41.9
Pp3c8_14070 Physcomitrium patens HOM05D006725 ORTHO05D008223 5.4e-19 98.6 111 39.6
Actinidia30676 Actinidia chinensis HOM05D006725 ORTHO05D008223 1.2e-18 97.4 104 51.0
MBI08_g41741_MAGBIO Magnolia biondii HOM05D006725 ORTHO05D008223 2.1e-18 96.7 55 81.8
SalBow1G8122 Salvia bowleyana HOM05D004872 ORTHO05D006050 2.1e-18 96.7 71 60.6
CBR_g17596 Chara braunii HOM05D006725 ORTHO05D008223 6.0e-18 95.1 107 41.1
CAN.G1081.11 Capsicum annuum HOM05D006725 ORTHO05D008223 2.3e-17 93.2 101 55.4
CAN.G3094.2 Capsicum annuum HOM05D006725 ORTHO05D008223 2.3e-17 93.2 101 55.4
CAN.G1081.12 Capsicum annuum HOM05D006725 ORTHO05D008223 3.9e-17 92.4 71 59.2
CAN.G3094.1 Capsicum annuum HOM05D006725 ORTHO05D008223 3.9e-17 92.4 71 59.2
CDE02G2623 Ceratophyllum demersum HOM05D006725 ORTHO05D008223 2.5e-16 89.7 97 53.6
Atru.chr7.1050 Acer truncatum HOM05D006725 ORTHO05D008223 7.3e-16 88.2 68 60.3
Oeu041686.1 Olea europaea HOM05D006725 ORTHO05D008223 3.6e-15 85.9 88 54.5
Cpa.g.sc351.2 Carica papaya HOM05D006725 ORTHO05D008223 1.4e-14 84.0 179 35.2
Hma1.2p1_0167F.1_g073800 Hydrangea macrophylla HOM05D006725 ORTHO05D008223 1.7e-12 77.0 52 63.5
MCO03G004 Micromonas commoda HOM05D006725 ORTHO05D008223 2.2e-12 76.6 129 31.8
RcHm_v2.0_Chr1g0366581 Rosa chinensis HOM05D006725 ORTHO05D008223 3.2e-11 72.8 52 69.2
RcHm_v2.0_Chr3g0456071 Rosa chinensis HOM05D006725 ORTHO05D008223 5.4e-11 72.0 51 68.6
RcHm_v2.0_Chr7g0183971 Rosa chinensis HOM05D006725 ORTHO05D008223 7.1e-11 71.6 52 67.3
MBI08_g41742_MAGBIO Magnolia biondii HOM05D006725 ORTHO05D008223 2.7e-10 69.7 89 46.1
SpUn0282_0010 Schrenkiella parvula HOM05D006725 ORTHO05D008223 6.9e-06 55.1 50 58.0


User provided reference genes

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