Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015488 Sechium edule HOM05D006105 ORTHO05D006345 4.7e-228 794.3 425 100.0
Sed0005720 Sechium edule HOM05D006105 ORTHO05D006345 5.0e-137 491.9 446 62.8
MELO3C025628.2 Cucumis melo HOM05D006105 ORTHO05D006345 3.7e-132 475.7 453 60.7
CsaV3_4G033280 Cucumis sativus L. HOM05D006105 ORTHO05D006345 3.7e-132 475.7 439 61.0
ClCG11G017660 Citrullus lanatus HOM05D006105 ORTHO05D006345 1.3e-129 467.2 445 60.4
QL08p027367 Quercus lobata HOM05D006105 ORTHO05D006345 6.1e-42 176.0 408 41.9
Prupe.4G171200 Prunus persica HOM05D006105 ORTHO05D006345 2.3e-41 174.1 466 35.4
Haze_09360 Corylus avellana HOM05D006105 ORTHO05D006345 6.3e-39 166.0 418 36.6
CiPaw.11G164300 Carya illinoinensis HOM05D006105 ORTHO05D006345 1.4e-38 164.9 414 35.7
Actinidia35226 Actinidia chinensis HOM05D006105 ORTHO05D006345 2.4e-38 164.1 418 36.8
Cfa019604 Carpinus fangiana HOM05D006105 ORTHO05D006345 3.1e-38 163.7 409 37.2
CiPaw.12G115300 Carya illinoinensis HOM05D006105 ORTHO05D006345 9.0e-38 162.2 452 34.7
GSVIVG01014239001 Vitis vinifera HOM05D006105 ORTHO05D006345 9.0e-38 162.2 401 35.7
Duzib213G0100 Durio zibethinus HOM05D006105 ORTHO05D006345 1.2e-37 161.8 465 37.6
Ciclev10010617m.g Citrus clementina HOM05D006105 ORTHO05D006345 1.5e-37 161.4 451 33.9
Actinidia18787 Actinidia chinensis HOM05D006105 ORTHO05D006345 3.4e-37 160.2 418 35.4
MD03G1238800 Malus domestica HOM05D006105 ORTHO05D006345 2.5e-35 154.1 476 38.2
CSS0026032 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 3.2e-35 153.7 405 37.3
Duzib268G0903 Durio zibethinus HOM05D006105 ORTHO05D006345 4.2e-35 153.3 430 37.9
FAN21G1974 Fragaria x ananassa HOM05D006105 ORTHO05D006345 4.6e-34 149.8 467 34.5
CSS0022090 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 6.1e-34 149.4 410 36.8
COL.COLO4_17616 Corchorus olitorius HOM05D006105 ORTHO05D006345 7.9e-34 149.1 472 37.1
TWI39G0145 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 1.0e-33 148.7 401 39.4
Dinv14962 Davidia involucrata HOM05D006105 ORTHO05D006345 5.1e-33 146.4 401 36.4
FAN25G1303 Fragaria x ananassa HOM05D006105 ORTHO05D006345 7.4e-32 142.5 471 34.6
MD11G1258600 Malus domestica HOM05D006105 ORTHO05D006345 1.3e-31 141.7 477 36.3
Thecc.07G103600 Theobroma cacao HOM05D006105 ORTHO05D006345 2.8e-31 140.6 445 35.7
TWI38G0440 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 1.1e-30 138.7 411 39.2
Cpa.g.sc131.73 Carica papaya HOM05D006105 ORTHO05D006345 2.4e-30 137.5 419 32.5
Glyma.12G228100 Glycine max HOM05D006105 ORTHO05D006345 3.1e-30 137.1 407 36.4
Hma1.2p1_0688F.1_g203660 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 6.9e-30 136.0 393 34.4
Manes.03G103501 Manihot esculenta HOM05D006105 ORTHO05D006345 6.9e-30 136.0 448 39.1
Potri.001G375600 Populus trichocarpa HOM05D006105 ORTHO05D006345 6.9e-30 136.0 453 31.8
Gorai.004G029900 Gossypium raimondii HOM05D006105 ORTHO05D006345 9.1e-30 135.6 418 35.6
Gohir.D08G032500 Gossypium hirsutum HOM05D006105 ORTHO05D006345 1.2e-29 135.2 420 35.5
FAN16G1829 Fragaria x ananassa HOM05D006105 ORTHO05D006345 1.3e-28 131.7 472 33.1
Lj8A152T79 Lonicera japonica HOM05D006105 ORTHO05D006345 1.3e-28 131.7 361 35.7
RcHm_v2.0_Chr5g0031561 Rosa chinensis HOM05D006105 ORTHO05D006345 1.7e-28 131.3 469 33.3
Actinidia07497 Actinidia chinensis HOM05D006105 ORTHO05D006345 3.8e-28 130.2 403 33.3
TAR629G1657 Trochodendron aralioides HOM05D006105 ORTHO05D006345 3.8e-28 130.2 412 39.6
Gohir.A08G021700 Gossypium hirsutum HOM05D006105 ORTHO05D006345 5.0e-28 129.8 419 37.0
CsaV3_4G008420 Cucumis sativus L. HOM05D006105 ORTHO05D006345 8.5e-28 129.0 425 34.1
FvH4_3g18750 Fragaria vesca HOM05D006105 ORTHO05D006345 1.4e-27 128.3 470 32.3
ClCG07G009910 Citrullus lanatus HOM05D006105 ORTHO05D006345 1.2e-26 125.2 424 33.7
Rhsim04G0024000 Rhododendron simsii HOM05D006105 ORTHO05D006345 1.2e-26 125.2 466 31.1
Lalb_Chr25g0286021 Lupinus albus HOM05D006105 ORTHO05D006345 1.6e-26 124.8 414 33.6
Glyma.13G271900 Glycine max HOM05D006105 ORTHO05D006345 2.1e-26 124.4 430 35.8
Nn1g09023 Nelumbo nucifera HOM05D006105 ORTHO05D006345 2.1e-26 124.4 434 32.0
FAN11G0448 Fragaria x ananassa HOM05D006105 ORTHO05D006345 2.7e-26 124.0 471 32.1
Lj3g0024128 Lotus japonicus HOM05D006105 ORTHO05D006345 2.7e-26 124.0 405 36.8
Hma1.2p1_0416F.1_g148610 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 1.0e-25 122.1 403 33.7
MELO3C016090.2 Cucumis melo HOM05D006105 ORTHO05D006345 2.3e-25 120.9 425 33.6
Rhsim06G0204700 Rhododendron simsii HOM05D006105 ORTHO05D006345 6.7e-25 119.4 429 33.3
Dinv18338 Davidia involucrata HOM05D006105 ORTHO05D006345 4.4e-24 116.7 290 35.9
Sed0026435 Sechium edule HOM05D006105 ORTHO05D006345 1.3e-23 115.2 410 32.2
Gorai.002G064700 Gossypium raimondii HOM05D006105 ORTHO05D006345 1.7e-23 114.8 410 32.0
Sabra16G0247400 Salix brachista HOM05D006105 ORTHO05D006345 2.2e-23 114.4 453 30.2
VMungo1080G1877 Vigna mungo HOM05D006105 ORTHO05D006345 3.7e-23 113.6 408 34.1
Phvul.005G068000 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 4.8e-23 113.2 412 33.5
ECA234G3938 Erigeron canadensis HOM05D006105 ORTHO05D006345 1.8e-22 111.3 428 32.2
Oeu005394.1 Olea europaea HOM05D006105 ORTHO05D006345 1.8e-22 111.3 348 34.5
PSO675G6909 Papaver somniferum HOM05D006105 ORTHO05D006345 9.1e-22 109.0 463 29.4
HanXRQChr10g0304731 Helianthus annuus HOM05D006105 ORTHO05D006345 1.5e-21 108.2 432 32.9
Atru.chr2.2260 Acer truncatum HOM05D006105 ORTHO05D006345 2.6e-21 107.5 348 33.0
Sopen12g005900 Solanum pennellii HOM05D006105 ORTHO05D006345 4.5e-21 106.7 439 31.2
arahy.Tifrunner.gnm1.ann1.KE6FEG Arachis hypogaea HOM05D006105 ORTHO05D006345 7.7e-21 105.9 399 30.6
MSTRG.14216 Avicennia marina HOM05D006105 ORTHO05D006345 7.7e-21 105.9 437 29.5
PGSC0003DMG400015376 Solanum tuberosum HOM05D006105 ORTHO05D006345 1.7e-20 104.8 353 32.6
MBI07_g17039_MAGBIO Magnolia biondii HOM05D006105 ORTHO05D006345 2.2e-20 104.4 403 31.5
Peaxi162Scf00000g02515 Petunia axillaris HOM05D006105 ORTHO05D006345 2.9e-20 104.0 328 34.5
Nitab4.5_0005445g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.1e-19 102.1 422 31.3
CSS0004572 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 1.5e-19 101.7 228 39.5
Glyma.06G232600 Glycine max HOM05D006105 ORTHO05D006345 1.5e-19 101.7 395 30.6
Aqoxy1G02199 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 7.2e-19 99.4 420 30.2
AUR62037870 Chenopodium quinoa HOM05D006105 ORTHO05D006345 1.2e-18 98.6 340 30.6
Gohir.A01G059000 Gossypium hirsutum HOM05D006105 ORTHO05D006345 2.7e-18 97.4 258 33.7
Gohir.D01G045100 Gossypium hirsutum HOM05D006105 ORTHO05D006345 3.6e-18 97.1 410 29.8
PSO541G5705 Papaver somniferum HOM05D006105 ORTHO05D006345 4.7e-18 96.7 461 29.5
Sc03g0010360 Simmondsia chinensis HOM05D006105 ORTHO05D006345 4.7e-18 96.7 364 32.4
Dinv17387 Davidia involucrata HOM05D006105 ORTHO05D006345 6.1e-18 96.3 431 33.4
TAR629G0423 Trochodendron aralioides HOM05D000109 ORTHO05D000965 3.0e-17 94.0 420 34.3
DCAR_019586 Daucus carota HOM05D006105 ORTHO05D006345 1.1e-16 92.0 450 30.7
TPR.G9213 Trifolium pratense HOM05D006105 ORTHO05D006345 5.7e-16 89.7 467 28.7
DCAR_013141 Daucus carota HOM05D006105 ORTHO05D006345 1.7e-15 88.2 434 28.6
Medtr2g078220 Medicago truncatula HOM05D006105 ORTHO05D006345 3.7e-15 87.0 438 28.3
TAR627G0886 Trochodendron aralioides HOM05D000157 ORTHO05D006345 3.7e-15 87.0 223 45.3
SGA_v2.0_scaffold73G24208 Striga asiatica HOM05D006105 ORTHO05D006345 8.2e-15 85.9 411 27.5
arahy.Tifrunner.gnm1.ann1.TTJ9YL Arachis hypogaea HOM05D006105 ORTHO05D006345 1.1e-14 85.5 390 28.2
AUR62019562 Chenopodium quinoa HOM05D006105 ORTHO05D006345 1.8e-14 84.7 421 27.6
Eucgr.F01202 Eucalyptus grandis HOM05D006105 ORTHO05D006345 1.8e-14 84.7 283 30.7
Sopen07g030920 Solanum pennellii HOM05D006105 ORTHO05D006345 1.8e-14 84.7 410 29.0
MSTRG.14950 Avicennia marina HOM05D006105 ORTHO05D006345 4.1e-14 83.6 413 29.3
Cc05_g11450 Coffea canephora HOM05D006105 ORTHO05D006345 4.1e-14 83.6 254 31.1
Ca_04016_v3 Cicer arietinum L. HOM05D006105 ORTHO05D006345 7.0e-14 82.8 448 28.6
HanXRQChr12g0372831 Helianthus annuus HOM05D006105 ORTHO05D006345 7.0e-14 82.8 246 37.0
Solyc07g062685.2 Solanum lycopersicum HOM05D006105 ORTHO05D006345 1.2e-13 82.0 414 28.3
Nitab4.5_0003202g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.6e-13 81.6 416 30.5
Oeu059277.1 Olea europaea HOM05D006105 ORTHO05D006345 2.0e-13 81.3 440 30.5
Nn1g04330 Nelumbo nucifera HOM05D006105 ORTHO05D006345 2.6e-13 80.9 252 34.1
Psat5g240600 Pisum sativum HOM05D006105 ORTHO05D006345 5.9e-13 79.7 308 27.6
Gohir.A13G148200 Gossypium hirsutum HOM05D006105 ORTHO05D006345 1.7e-12 78.2 303 31.7
Solyc12g014120.3 Solanum lycopersicum HOM05D006105 ORTHO05D006345 2.2e-12 77.8 188 36.7
DCAR_024487 Daucus carota HOM05D006105 ORTHO05D006345 5.0e-12 76.6 272 30.5
Phvul.011G157100 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 5.0e-12 76.6 396 30.8
arahy.Tifrunner.gnm1.ann1.LEI4AX Arachis hypogaea HOM05D006105 ORTHO05D006345 2.1e-10 71.2 408 27.5
Migut.M00751 Erythranthe guttata HOM05D006105 ORTHO05D006345 3.6e-10 70.5 344 27.6
Manes.16G035200 Manihot esculenta HOM05D013066 ORTHO05D006345 3.6e-10 70.5 430 29.8
Oeu061338.1 Olea europaea HOM05D006105 ORTHO05D006345 8.0e-10 69.3 224 31.7
Peaxi162Scf00069g01930 Petunia axillaris HOM05D006105 ORTHO05D006345 1.8e-09 68.2 237 30.0
Nitab4.5_0000246g0110 Nicotiana tabacum HOM05D006105 ORTHO05D006345 2.3e-09 67.8 405 28.4
SalBow7G3373 Salvia bowleyana HOM05D006105 ORTHO05D006345 6.8e-09 66.2 329 29.8
SalBow8G2605 Salvia bowleyana HOM05D006105 ORTHO05D006345 1.5e-08 65.1 402 27.6
SalBow7G2198 Salvia bowleyana HOM05D006105 ORTHO05D006345 2.0e-08 64.7 329 29.5
DCAR_021012 Daucus carota HOM05D006105 ORTHO05D006345 5.7e-08 63.2 424 28.1
Glyma.06G232800 Glycine max HOM05D006105 ORTHO05D006345 7.5e-08 62.8 274 28.5
PGR083G1480 Punica granatum HOM05D006105 ORTHO05D006345 1.7e-07 61.6 417 25.7
PGSC0003DMG400021273 Solanum tuberosum HOM05D006105 ORTHO05D006345 6.3e-07 59.7 396 26.0
SGA_v2.0_scaffold34G13768 Striga asiatica HOM05D006105 ORTHO05D006345 6.3e-07 59.7 389 25.4
Manes.17G052800 Manihot esculenta HOM05D013066 ORTHO05D010890 8.3e-07 59.3 407 29.0


User provided reference genes

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