Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015487 Sechium edule HOM05D007133 ORTHO05D008954 4.2e-44 181.0 95 100.0
CsaV3_7G030730 Cucumis sativus L. HOM05D007133 ORTHO05D008954 1.5e-33 146.0 95 81.1
MELO3C023583.2 Cucumis melo HOM05D007133 ORTHO05D008954 2.4e-31 138.7 109 71.6
ClCG09G004410 Citrullus lanatus HOM05D007133 ORTHO05D008954 9.1e-31 136.7 130 62.3
vmacro21138 Vaccinium macrocarpon HOM05D007133 ORTHO05D008954 1.0e-29 133.3 86 76.7
Dinv03122 Davidia involucrata HOM05D007133 ORTHO05D008954 2.2e-29 132.1 86 75.6
Dinv09308 Davidia involucrata HOM05D007133 ORTHO05D008954 2.2e-29 132.1 86 75.6
Cc02_g28790 Coffea canephora HOM05D007133 ORTHO05D008954 8.5e-29 130.2 86 74.4
TWI09G1631 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 8.5e-29 130.2 86 74.4
TWI53G1532 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 1.1e-28 129.8 85 74.1
Eucgr.G03322 Eucalyptus grandis HOM05D007133 ORTHO05D008954 1.5e-28 129.4 85 77.6
Glyma.09G226900 Glycine max HOM05D007133 ORTHO05D008954 1.5e-28 129.4 77 80.5
Glyma.12G009900 Glycine max HOM05D007133 ORTHO05D008954 1.5e-28 129.4 77 80.5
Nn7g36332 Nelumbo nucifera HOM05D007133 ORTHO05D008954 1.5e-28 129.4 86 74.4
CiPaw.14G003100 Carya illinoinensis HOM05D007133 ORTHO05D008954 3.2e-28 128.3 85 72.9
Manes.10G136200 Manihot esculenta HOM05D007133 ORTHO05D008954 3.2e-28 128.3 86 73.3
PGR031G3629 Punica granatum HOM05D007133 ORTHO05D008954 3.2e-28 128.3 85 75.3
Ciclev10033166m.g Citrus clementina HOM05D007133 ORTHO05D008954 4.2e-28 127.9 94 70.2
MD02G1300200 Malus domestica HOM05D007133 ORTHO05D008954 5.5e-28 127.5 86 73.3
SGA_v2.0_scaffold5G02955 Striga asiatica HOM05D007133 ORTHO05D008954 5.5e-28 127.5 78 82.1
Actinidia21538 Actinidia chinensis HOM05D007133 ORTHO05D008954 7.2e-28 127.1 82 75.6
Sc10g0000360 Simmondsia chinensis HOM05D007133 ORTHO05D008954 1.6e-27 125.9 93 67.7
Migut.N01798 Erythranthe guttata HOM05D007133 ORTHO05D008954 2.1e-27 125.6 85 71.8
THA.LOC104817576 Tarenaya hassleriana HOM05D007133 ORTHO05D008954 2.1e-27 125.6 81 75.3
RcHm_v2.0_Chr1g0318451 Rosa chinensis HOM05D007133 ORTHO05D008954 3.6e-27 124.8 85 74.1
Peaxi162Scf01270g00118 Petunia axillaris HOM05D007133 ORTHO05D008954 4.7e-27 124.4 86 70.9
Lsat_1_v5_gn_1_104961 Lactuca sativa HOM05D007133 ORTHO05D008954 6.1e-27 124.0 81 75.3
Hund26515 Selenicereus undatus HOM05D007133 ORTHO05D008954 6.1e-27 124.0 85 72.9
Duzib268G0834 Durio zibethinus HOM05D007133 ORTHO05D008954 8.0e-27 123.6 82 73.2
FvH4_7g01820 Fragaria vesca HOM05D007133 ORTHO05D008954 8.0e-27 123.6 85 74.1
FAN01G1667 Fragaria x ananassa HOM05D007133 ORTHO05D008954 8.0e-27 123.6 85 74.1
GSVIVG01032212001 Vitis vinifera HOM05D007133 ORTHO05D008954 8.0e-27 123.6 86 74.4
Medtr0512s0010 Medicago truncatula HOM05D007133 ORTHO05D008954 1.4e-26 122.9 86 69.8
Oeu027371.1 Olea europaea HOM05D007133 ORTHO05D008954 1.4e-26 122.9 93 68.8
Prupe.2G024400 Prunus persica HOM05D007133 ORTHO05D008954 1.4e-26 122.9 86 69.8
arahy.Tifrunner.gnm1.ann1.1B9UE2 Arachis hypogaea HOM05D007133 ORTHO05D008954 2.3e-26 122.1 86 68.6
CSS0001581 Camellia sinensis var. sinensis HOM05D007133 ORTHO05D008954 2.3e-26 122.1 85 69.4
MD07G1024700 Malus domestica HOM05D007133 ORTHO05D008954 2.3e-26 122.1 84 72.6
Phvul.011G010800 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 2.3e-26 122.1 86 69.8
Thecc.01G406600 Theobroma cacao HOM05D007133 ORTHO05D008954 2.3e-26 122.1 84 71.4
Lalb_Chr04g0263851 Lupinus albus HOM05D007133 ORTHO05D008954 3.0e-26 121.7 77 77.9
Phvul.001G156100 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 3.0e-26 121.7 86 69.8
HanXRQChr06g0179721 Helianthus annuus HOM05D007133 ORTHO05D008954 4.0e-26 121.3 81 72.8
Lj3g0009786 Lotus japonicus HOM05D007133 ORTHO05D008954 4.0e-26 121.3 86 69.8
TPR.G30180 Trifolium pratense HOM05D007133 ORTHO05D008954 4.0e-26 121.3 86 69.8
Gohir.A12G100700 Gossypium hirsutum HOM05D007133 ORTHO05D008954 5.2e-26 120.9 93 67.7
Gohir.D12G103551 Gossypium hirsutum HOM05D007133 ORTHO05D008954 5.2e-26 120.9 93 67.7
Gorai.008G112700 Gossypium raimondii HOM05D007133 ORTHO05D008954 5.2e-26 120.9 93 67.7
Potri.001G262000 Populus trichocarpa HOM05D007133 ORTHO05D008954 6.7e-26 120.6 86 69.8
TAR633G1269 Trochodendron aralioides HOM05D007133 ORTHO05D008954 6.7e-26 120.6 83 72.3
arahy.Tifrunner.gnm1.ann1.PZX0PK Arachis hypogaea HOM05D007133 ORTHO05D008954 8.8e-26 120.2 84 69.0
EL10Ac2g04374 Beta vulgaris HOM05D007133 ORTHO05D008954 1.5e-25 119.4 93 66.7
COL.COLO4_12337 Corchorus olitorius HOM05D007133 ORTHO05D008954 1.5e-25 119.4 86 70.9
Atru.chr11.2512 Acer truncatum HOM05D007133 ORTHO05D008954 2.0e-25 119.0 84 76.2
Ah.10g038590 Amaranthus hybridus HOM05D007133 ORTHO05D008954 2.6e-25 118.6 86 69.8
ECA248G0684 Erigeron canadensis HOM05D007133 ORTHO05D008954 2.6e-25 118.6 83 72.3
Potri.009G056800 Populus trichocarpa HOM05D007133 ORTHO05D008954 3.3e-25 118.2 77 75.3
CANSAT80G0888 Cannabis sativa HOM05D007133 ORTHO05D008954 4.4e-25 117.9 84 73.8
Lalb_Chr25g0282521 Lupinus albus HOM05D007133 ORTHO05D008954 5.7e-25 117.5 86 69.8
BcaB01g00452 Brassica carinata HOM05D007133 ORTHO05D008954 2.2e-24 115.5 82 68.3
C08p27290 Brassica napus HOM05D007133 ORTHO05D008954 2.2e-24 115.5 82 68.3
BolC8t50346H Brassica oleracea HOM05D007133 ORTHO05D008954 2.2e-24 115.5 82 68.3
PSO063G0957 Papaver somniferum HOM05D007133 ORTHO05D008954 2.2e-24 115.5 85 67.1
Ca_26645_v3 Cicer arietinum L. HOM05D007133 ORTHO05D008954 2.8e-24 115.2 93 67.7
PSO170G5856 Papaver somniferum HOM05D007133 ORTHO05D008954 2.8e-24 115.2 85 67.1
Carub.0005s1836 Capsella rubella HOM05D007133 ORTHO05D008954 6.3e-24 114.0 82 70.7
A09p45100 Brassica napus HOM05D007133 ORTHO05D008954 8.2e-24 113.6 82 67.1
BraA09t39971Z Brassica rapa HOM05D007133 ORTHO05D008954 8.2e-24 113.6 82 67.1
AUR62023097 Chenopodium quinoa HOM05D007133 ORTHO05D008954 8.2e-24 113.6 93 64.5
BcaC06g33021 Brassica carinata HOM05D007133 ORTHO05D008954 1.4e-23 112.8 82 68.3
Zm00001eb332910 Zea mays HOM05D007133 ORTHO05D008954 1.4e-23 112.8 81 69.1
AT3G52040 Arabidopsis thaliana HOM05D007133 ORTHO05D008954 5.3e-23 110.9 80 70.0
Aqoxy1G00141 Aquilegia oxysepala HOM05D007133 ORTHO05D008954 7.0e-23 110.5 93 64.5
AL5G32580 Arabidopsis lyrata HOM05D007133 ORTHO05D008954 7.0e-23 110.5 82 69.5
Thhalv10010861m.g Eutrema salsugineum HOM05D007133 ORTHO05D008954 1.2e-22 109.8 82 68.3
Sabra09G0041600 Salix brachista HOM05D007133 ORTHO05D008954 1.2e-22 109.8 86 66.3
Aa31LG10G7080 Aethionema arabicum HOM05D007133 ORTHO05D008954 1.6e-22 109.4 90 65.6
CDE08G1151 Ceratophyllum demersum HOM05D007133 ORTHO05D008954 1.6e-22 109.4 84 69.0
FAN10G0509 Fragaria x ananassa HOM05D007133 ORTHO05D008954 2.0e-22 109.0 77 71.4
Solyc01g087880.3 Solanum lycopersicum HOM05D007133 ORTHO05D008954 2.7e-22 108.6 94 64.9
Nitab4.5_0008942g0020 Nicotiana tabacum HOM05D007133 ORTHO05D008954 3.5e-22 108.2 86 62.8
C07p46740 Brassica napus HOM05D007133 ORTHO05D008954 5.9e-22 107.5 88 62.5
BolC7t45192H Brassica oleracea HOM05D007133 ORTHO05D008954 5.9e-22 107.5 88 62.5
Sopen01g034810 Solanum pennellii HOM05D007133 ORTHO05D008954 5.9e-22 107.5 94 64.9
BcaC06g33378 Brassica carinata HOM05D007133 ORTHO05D008954 7.7e-22 107.1 88 62.5
PGSC0003DMG400006836 Solanum tuberosum HOM05D007133 ORTHO05D008954 1.3e-21 106.3 95 65.3
Eucgr.G03325 Eucalyptus grandis HOM05D007133 ORTHO05D008954 2.9e-21 105.1 82 65.9
BraA03t13967Z Brassica rapa HOM05D007133 ORTHO05D008954 1.1e-20 103.2 88 60.2
A03p48620 Brassica napus HOM05D007133 ORTHO05D008954 2.5e-20 102.1 88 59.1
CARHR161670 Cardamine hirsuta HOM05D007133 ORTHO05D008954 2.5e-20 102.1 82 63.4
SalBow6G3002 Salvia bowleyana HOM05D007133 ORTHO05D008954 3.6e-19 98.2 121 46.3
Cc00_g19310 Coffea canephora HOM05D004771 ORTHO05D005565 1.4e-18 96.3 94 60.6
unitig_8.g3622 Utricularia gibba HOM05D007133 ORTHO05D008954 3.0e-18 95.1 71 64.8
Nitab4.5_0001244g0090 Nicotiana tabacum HOM05D007133 ORTHO05D008954 6.8e-18 94.0 112 48.2
Haze_03143 Corylus avellana HOM05D007133 ORTHO05D008954 3.4e-17 91.7 151 41.1
Haze_03146 Corylus avellana HOM05D007133 ORTHO05D008954 3.4e-17 91.7 151 41.1
Medtr4g101060 Medicago truncatula HOM05D007133 ORTHO05D008954 4.1e-15 84.7 59 69.5
Dinv09304 Davidia involucrata HOM05D007133 ORTHO05D008954 7.0e-15 84.0 86 55.8
Rhsim01G0126300 Rhododendron simsii HOM05D007133 ORTHO05D008954 2.0e-14 82.4 55 74.5
Psat7g197280 Pisum sativum HOM05D007133 ORTHO05D008954 1.7e-13 79.3 58 67.2
MBI19_g09240_MAGBIO Magnolia biondii HOM05D007133 ORTHO05D008954 2.9e-13 78.6 188 31.9
QL04p010011 Quercus lobata HOM05D007133 ORTHO05D008954 6.5e-13 77.4 48 72.9
AagrBONN_evm.TU.Sc2ySwM_344.2738 Anthoceros agrestis HOM05D007133 ORTHO05D008954 1.5e-12 76.3 81 54.3
Pp3c9_17680 Physcomitrium patens HOM05D007133 ORTHO05D008954 1.9e-12 75.9 93 51.6
Mapoly0049s0103 Marchantia polymorpha HOM05D007133 ORTHO05D008954 3.2e-12 75.1 77 55.8
Duzib133G0944 Durio zibethinus HOM05D007133 ORTHO05D008954 9.5e-12 73.6 48 72.9
HPP92_001020 Vanilla planifolia HOM05D007133 ORTHO05D008954 9.5e-12 73.6 63 60.3
Hma1.2p1_0685F.1_g203210 Hydrangea macrophylla HOM05D007133 ORTHO05D008954 1.2e-11 73.2 49 69.4
Os01g0271700 Oryza sativa ssp. japonica HOM05D007133 ORTHO05D008954 3.0e-10 68.6 48 68.8
Cc00_g26940 Coffea canephora HOM05D007133 ORTHO05D008954 3.7e-08 61.6 54 64.8
Rhsim01G0126100 Rhododendron simsii HOM05D007133 ORTHO05D008954 1.6e-06 56.2 40 67.5


User provided reference genes

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