Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 5.5e-178 627.5 306 100.0
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 4.8e-166 587.8 306 93.5
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 8.2e-166 587.0 306 93.8
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 2.6e-159 565.5 306 88.2
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 7.4e-159 563.9 306 87.9
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 1.3e-158 563.1 307 87.9
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 3.7e-158 561.6 306 87.3
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 8.2e-158 560.5 307 87.9
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 1.5e-156 556.2 306 85.9
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 1.3e-155 553.1 390 73.6
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 1.3e-155 553.1 306 86.6
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 6.5e-155 550.8 306 86.6
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 1.1e-154 550.1 306 85.6
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 1.9e-154 549.3 307 86.3
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 3.2e-154 548.5 306 85.0
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 2.7e-153 545.4 306 84.3
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 8.0e-153 543.9 306 85.0
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.0e-152 543.5 307 85.3
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 1.0e-152 543.5 306 85.3
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 1.4e-152 543.1 307 84.7
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 1.4e-152 543.1 307 85.0
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.8e-152 542.7 307 85.3
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 2.3e-152 542.3 307 84.7
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 2.3e-152 542.3 307 85.7
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 3.9e-152 541.6 306 85.6
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 5.2e-152 541.2 306 85.3
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 5.2e-152 541.2 307 85.7
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 5.2e-152 541.2 306 84.3
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 1.5e-151 539.7 306 85.6
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 2.0e-151 539.3 306 83.3
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 9.7e-151 537.0 307 84.7
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 9.7e-151 537.0 306 84.6
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 1.3e-150 536.6 322 80.4
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 1.3e-150 536.6 307 84.0
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 1.7e-150 536.2 307 85.0
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 1.7e-150 536.2 307 83.7
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 4.8e-150 534.6 306 82.7
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 6.3e-150 534.3 307 83.7
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 1.4e-149 533.1 307 83.1
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 3.1e-149 531.9 307 83.1
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 1.2e-148 530.0 307 83.7
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 1.6e-148 529.6 307 81.8
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 2.0e-148 529.3 306 81.4
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 5.9e-148 527.7 307 81.8
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 1.7e-147 526.2 307 83.1
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 8.5e-147 523.9 307 82.7
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 8.5e-147 523.9 307 82.7
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 1.1e-146 523.5 307 81.1
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 1.5e-146 523.1 307 80.5
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 2.5e-146 522.3 306 82.7
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 4.2e-146 521.5 307 80.1
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 3.6e-145 518.5 304 81.6
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 4.7e-145 518.1 307 81.1
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 2.6e-143 512.3 307 78.8
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 3.3e-143 511.9 307 78.5
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 9.7e-143 510.4 288 84.0
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 4.8e-142 508.1 307 77.9
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 2.4e-141 505.8 307 77.5
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 3.1e-141 505.4 307 77.5
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 7.0e-141 504.2 358 71.2
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 2.2e-139 499.2 370 68.6
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 1.9e-138 496.1 307 78.5
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 4.2e-138 495.0 307 75.2
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 9.4e-138 493.8 306 75.5
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 1.6e-137 493.0 305 80.7
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 2.1e-137 492.7 306 76.1
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 4.7e-137 491.5 371 65.8
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 1.0e-136 490.3 307 75.6
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 2.3e-136 489.2 307 75.2
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 1.5e-135 486.5 313 78.3
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 2.6e-135 485.7 276 83.3
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 7.5e-135 484.2 307 74.9
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 6.3e-134 481.1 275 82.9
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 5.9e-132 474.6 307 73.9
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 1.2e-127 460.3 307 74.6
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 3.1e-125 452.2 307 71.7
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 6.6e-123 444.5 277 74.7
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 1.1e-122 443.7 293 74.7
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 1.6e-121 439.9 278 75.2
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 3.6e-121 438.7 243 85.2
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 3.4e-119 432.2 277 74.0
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 1.3e-118 430.3 235 87.2
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 3.9e-115 418.7 312 64.4
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 2.1e-113 412.9 310 64.2
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 4.4e-111 405.2 307 68.1
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 1.1e-104 384.0 236 76.3
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 2.6e-103 379.4 306 58.2
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 5.8e-103 378.3 297 61.3
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 1.2e-79 300.8 316 50.0
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 2.4e-77 293.1 266 59.0
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 3.5e-76 289.3 190 71.1
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 5.3e-64 248.8 134 87.3
CSS0032842 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 5.1e-59 232.3 170 71.2
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 6.7e-59 231.9 310 42.3
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 5.7e-58 228.8 565 29.2
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 1.3e-57 227.6 282 44.3
ATR0019G012 Amborella trichopoda HOM05D007381 ORTHO05D009496 1.6e-57 227.3 148 74.3
Ca_17124_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 2.2e-25 120.6 88 71.6
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 4.1e-24 116.3 70 72.9
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 2.5e-21 107.1 96 51.0
Ca_08895_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 5.5e-21 105.9 72 73.6
Cfa025505 Carpinus fangiana HOM05D007381 ORTHO05D009496 1.6e-20 104.4 221 31.7
COL.COLO4_34115 Corchorus olitorius HOM05D007381 ORTHO05D159467 1.1e-08 65.1 39 79.5
Rhsim08G0136300 Rhododendron simsii HOM05D007381 ORTHO05D006450 1.6e-07 61.2 53 64.2


User provided reference genes

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