Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015458 Sechium edule HOM05D002253 ORTHO05D002351 1.8e-108 396.0 201 100.0
Sed0002119 Sechium edule HOM05D002253 ORTHO05D002351 3.5e-40 169.1 213 53.5
ClCG06G014880 Citrullus lanatus HOM05D002253 ORTHO05D002351 9.2e-33 144.4 218 49.5
MELO3C017301.2 Cucumis melo HOM05D002253 ORTHO05D002351 8.6e-31 137.9 212 48.1
CsaV3_1G003770 Cucumis sativus L. HOM05D002253 ORTHO05D002351 2.8e-29 132.9 216 49.1
RcHm_v2.0_Chr7g0185281 Rosa chinensis HOM05D002253 ORTHO05D002351 5.4e-17 92.0 209 39.2
MD06G1215300 Malus domestica HOM05D002253 ORTHO05D002351 7.8e-16 88.2 225 37.3
PGR044G1243 Punica granatum HOM05D002253 ORTHO05D002351 3.0e-15 86.3 187 41.7
FAN04G1468 Fragaria x ananassa HOM05D002253 ORTHO05D002351 8.7e-15 84.7 210 37.6
FvH4_5g12280 Fragaria vesca HOM05D002253 ORTHO05D002351 1.5e-14 84.0 213 38.0
FAN18G1637 Fragaria x ananassa HOM05D002253 ORTHO05D002351 1.5e-14 84.0 213 38.0
FAN13G2702 Fragaria x ananassa HOM05D002253 ORTHO05D002351 1.9e-14 83.6 230 36.1
FAN18G0057 Fragaria x ananassa HOM05D002253 ORTHO05D002351 1.9e-14 83.6 213 36.6
ClCG04G011180 Citrullus lanatus HOM05D002253 ORTHO05D002351 5.6e-14 82.0 206 38.3
MD14G1226200 Malus domestica HOM05D002253 ORTHO05D002351 5.6e-14 82.0 235 34.9
Cfa019788 Carpinus fangiana HOM05D002253 ORTHO05D002351 4.8e-13 79.0 184 39.7
FAN08G0576 Fragaria x ananassa HOM05D002253 ORTHO05D002351 6.2e-13 78.6 233 35.2
Hma1.2p1_0592F.1_g185326 Hydrangea macrophylla HOM05D002253 ORTHO05D002351 1.1e-12 77.8 167 38.9
Hma1.2p1_2265F.1_g318410 Hydrangea macrophylla HOM05D002253 ORTHO05D002351 1.1e-12 77.8 167 38.9
Nn3g17816 Nelumbo nucifera HOM05D002253 ORTHO05D002351 1.4e-12 77.4 178 38.8
QL10p025078 Quercus lobata HOM05D002253 ORTHO05D002351 1.4e-12 77.4 193 37.3
Haze_18660 Corylus avellana HOM05D002253 ORTHO05D002351 1.8e-12 77.0 175 40.6
Duzib084G0173 Durio zibethinus HOM05D002253 ORTHO05D002351 2.4e-12 76.6 222 35.6
Dinv09805 Davidia involucrata HOM05D002253 ORTHO05D002351 9.0e-12 74.7 187 36.9
Eucgr.K02217 Eucalyptus grandis HOM05D002253 ORTHO05D002351 1.5e-11 73.9 145 42.8
PGR083G0350 Punica granatum HOM05D002253 ORTHO05D002351 1.5e-11 73.9 180 35.0
Hma1.2p1_1001F.1_g246520 Hydrangea macrophylla HOM05D002253 ORTHO05D002351 2.0e-11 73.6 143 40.6
Prupe.5G220600 Prunus persica HOM05D002253 ORTHO05D002351 2.6e-11 73.2 135 42.2
Atru.chr9.822 Acer truncatum HOM05D002253 ORTHO05D002351 3.4e-11 72.8 211 32.7
CSS0015690 Camellia sinensis var. sinensis HOM05D002253 ORTHO05D002351 4.5e-11 72.4 179 34.1
CSS0050023 Camellia sinensis var. sinensis HOM05D002253 ORTHO05D002351 9.9e-11 71.2 179 34.1
ECA233G6013 Erigeron canadensis HOM05D002253 ORTHO05D002351 9.9e-11 71.2 178 37.1
Cfa018604 Carpinus fangiana HOM05D002253 ORTHO05D002351 1.7e-10 70.5 162 36.4
MELO3C002083.2 Cucumis melo HOM05D002253 ORTHO05D002351 2.2e-10 70.1 213 33.8
Manes.05G137800 Manihot esculenta HOM05D002253 ORTHO05D002351 2.2e-10 70.1 214 37.9
Manes.01G012400 Manihot esculenta HOM05D002253 ORTHO05D002351 2.9e-10 69.7 219 37.4
Os01g0131300 Oryza sativa ssp. japonica HOM05D002253 ORTHO05D002351 2.9e-10 69.7 95 49.5
BcaB03g13144 Brassica carinata HOM05D002253 ORTHO05D002351 3.8e-10 69.3 81 44.4
Ca_25500_v3 Cicer arietinum L. HOM05D002253 ORTHO05D002351 3.8e-10 69.3 203 34.0
Sed0025828 Sechium edule HOM05D002253 ORTHO05D002351 3.8e-10 69.3 153 39.2
Zm00001eb335140 Zea mays HOM05D002253 ORTHO05D002351 3.8e-10 69.3 92 48.9
Zm00001eb125340 Zea mays HOM05D002253 ORTHO05D002351 6.4e-10 68.6 148 35.1
Duzib205G1666 Durio zibethinus HOM05D002253 ORTHO05D002351 8.4e-10 68.2 234 32.9
MBI10_g16026_MAGBIO Magnolia biondii HOM05D002253 ORTHO05D002351 1.1e-09 67.8 166 38.0
CiPaw.16G064200 Carya illinoinensis HOM05D002253 ORTHO05D002351 1.4e-09 67.4 156 36.5
Lalb_Chr05g0222551 Lupinus albus HOM05D002253 ORTHO05D002351 1.4e-09 67.4 165 36.4
TWI81G0977 Tripterygium wilfordii HOM05D002253 ORTHO05D002351 1.4e-09 67.4 112 44.6
Actinidia16646 Actinidia chinensis HOM05D002253 ORTHO05D002351 2.4e-09 66.6 162 34.0
Haze_17470 Corylus avellana HOM05D002253 ORTHO05D002351 2.4e-09 66.6 187 34.8
CsaV3_1G006570 Cucumis sativus L. HOM05D002253 ORTHO05D002351 4.2e-09 65.9 217 34.6
Lj4g0014578 Lotus japonicus HOM05D002253 ORTHO05D002351 4.2e-09 65.9 170 36.5
BcaC05g25051 Brassica carinata HOM05D002253 ORTHO05D002351 5.4e-09 65.5 157 31.8
CiPaw.15G129600 Carya illinoinensis HOM05D002253 ORTHO05D002351 5.4e-09 65.5 209 38.3
Glyma.08G040800 Glycine max HOM05D002253 ORTHO05D002351 5.4e-09 65.5 210 31.9
CAN.G438.133 Capsicum annuum HOM05D002253 ORTHO05D002351 9.3e-09 64.7 194 34.0
Oeu014307.1 Olea europaea HOM05D002253 ORTHO05D002351 9.3e-09 64.7 178 34.3
Ca_25451_v3 Cicer arietinum L. HOM05D002253 ORTHO05D002351 1.2e-08 64.3 219 34.7
PGSC0003DMG400012967 Solanum tuberosum HOM05D002253 ORTHO05D002351 1.2e-08 64.3 161 35.4
BolC5t29733H Brassica oleracea HOM05D002253 ORTHO05D002351 1.6e-08 63.9 148 36.5
Actinidia14884 Actinidia chinensis HOM05D002253 ORTHO05D002351 2.1e-08 63.5 181 33.1
Cc04_g07200 Coffea canephora HOM05D002253 ORTHO05D002351 2.1e-08 63.5 148 37.8
Nitab4.5_0000208g0200 Nicotiana tabacum HOM05D002253 ORTHO05D002351 2.1e-08 63.5 191 35.6
Nitab4.5_0017241g0010 Nicotiana tabacum HOM05D002253 ORTHO05D002351 2.1e-08 63.5 177 35.0
PSO478G2314 Papaver somniferum HOM05D002253 ORTHO05D002351 2.1e-08 63.5 201 31.8
Glyma.05G233500 Glycine max HOM05D002253 ORTHO05D002351 2.7e-08 63.2 179 35.8
Lj2g0015775 Lotus japonicus HOM05D002253 ORTHO05D002351 2.7e-08 63.2 171 37.4
Phvul.004G158400 Phaseolus vulgaris HOM05D002253 ORTHO05D002351 2.7e-08 63.2 137 38.7
Sabra15G0075100 Salix brachista HOM05D002253 ORTHO05D002351 2.7e-08 63.2 173 35.8
Solyc06g069150.1 Solanum lycopersicum HOM05D002253 ORTHO05D002351 2.7e-08 63.2 219 33.3
CSS0039080 Camellia sinensis var. sinensis HOM05D002253 ORTHO05D002351 3.5e-08 62.8 164 37.8
Sed0018111 Sechium edule HOM05D002253 ORTHO05D002351 3.5e-08 62.8 204 34.3
Solyc03g119610.1 Solanum lycopersicum HOM05D002253 ORTHO05D002351 3.5e-08 62.8 186 36.6
C05p09930 Brassica napus HOM05D002253 ORTHO05D002351 4.6e-08 62.4 146 34.2
Carub.0001s1308 Capsella rubella HOM05D002253 ORTHO05D002351 4.6e-08 62.4 184 32.6
Duzib068G0367 Durio zibethinus HOM05D002253 ORTHO05D002351 4.6e-08 62.4 215 34.4
Potri.010G126000 Populus trichocarpa HOM05D002253 ORTHO05D002351 4.6e-08 62.4 109 42.2
Sopen12g017580 Solanum pennellii HOM05D002253 ORTHO05D002351 4.6e-08 62.4 178 32.6
Glyma.07G090800 Glycine max HOM05D002253 ORTHO05D002351 6.0e-08 62.0 136 38.2
THA.LOC104825702 Tarenaya hassleriana HOM05D002253 ORTHO05D002351 6.0e-08 62.0 85 43.5
Ciclev10022179m.g Citrus clementina HOM05D002253 ORTHO05D002351 7.9e-08 61.6 181 38.1
Peaxi162Scf00015g00812 Petunia axillaris HOM05D002253 ORTHO05D002351 7.9e-08 61.6 209 30.1
VMungo0464G1075 Vigna mungo HOM05D002253 ORTHO05D002351 7.9e-08 61.6 183 35.5
CARHR013740 Cardamine hirsuta HOM05D002253 ORTHO05D002351 1.0e-07 61.2 161 34.8
PSO017G1795 Papaver somniferum HOM05D002253 ORTHO05D002351 1.0e-07 61.2 123 35.8
Sabra08G0090800 Salix brachista HOM05D002253 ORTHO05D002351 1.0e-07 61.2 159 35.2
Solyc05g009520.2 Solanum lycopersicum HOM05D002253 ORTHO05D002351 1.0e-07 61.2 89 43.8
Sopen05g005330 Solanum pennellii HOM05D002253 ORTHO05D002351 1.0e-07 61.2 155 36.8
COL.COLO4_04673 Corchorus olitorius HOM05D002253 ORTHO05D002351 1.3e-07 60.8 159 33.3
Dinv28089 Davidia involucrata HOM05D002253 ORTHO05D002351 1.3e-07 60.8 167 36.5
Glyma.20G114800 Glycine max HOM05D002253 ORTHO05D002351 1.3e-07 60.8 149 31.5
Sp1g11860 Schrenkiella parvula HOM05D002253 ORTHO05D002351 1.3e-07 60.8 202 30.7
Thecc.03G033900 Theobroma cacao HOM05D002253 ORTHO05D002351 1.3e-07 60.8 218 32.1
TWI79G0250 Tripterygium wilfordii HOM05D002253 ORTHO05D002351 1.3e-07 60.8 158 39.2
A06p08400 Brassica napus HOM05D002253 ORTHO05D002351 1.8e-07 60.5 137 36.5
BraA06t24036Z Brassica rapa HOM05D002253 ORTHO05D002351 1.8e-07 60.5 137 36.5
Glyma.10G275000 Glycine max HOM05D002253 ORTHO05D002351 1.8e-07 60.5 93 39.8
Nn4g23814 Nelumbo nucifera HOM05D002253 ORTHO05D002351 2.3e-07 60.1 187 34.2
PSO017G4876 Papaver somniferum HOM05D002253 ORTHO05D002351 2.3e-07 60.1 180 34.4
Sc04g0006530 Simmondsia chinensis HOM05D002253 ORTHO05D002351 2.3e-07 60.1 127 41.7
Sopen06g026430 Solanum pennellii HOM05D002253 ORTHO05D002351 2.3e-07 60.1 219 33.8
Nitab4.5_0010492g0010 Nicotiana tabacum HOM05D002253 ORTHO05D002351 3.0e-07 59.7 194 33.0
Potri.015G054300 Populus trichocarpa HOM05D002253 ORTHO05D002351 3.0e-07 59.7 175 34.9
PGSC0003DMG400005716 Solanum tuberosum HOM05D002253 ORTHO05D002351 3.0e-07 59.7 186 35.5
THA.LOC104805252 Tarenaya hassleriana HOM05D002253 ORTHO05D002351 3.0e-07 59.7 177 29.4
VMungo0720G1033 Vigna mungo HOM05D002253 ORTHO05D002351 3.0e-07 59.7 95 41.1
Aqoxy3G00318 Aquilegia oxysepala HOM05D002253 ORTHO05D002351 3.9e-07 59.3 96 43.8
A08p32340 Brassica napus HOM05D002253 ORTHO05D002351 3.9e-07 59.3 101 39.6
BraA08t35157Z Brassica rapa HOM05D002253 ORTHO05D002351 3.9e-07 59.3 101 39.6
CiPaw.15G084000 Carya illinoinensis HOM05D002253 ORTHO05D002351 3.9e-07 59.3 160 37.5
Duzib268G0137 Durio zibethinus HOM05D002253 ORTHO05D002351 3.9e-07 59.3 158 34.8
Nitab4.5_0001194g0010 Nicotiana tabacum HOM05D002253 ORTHO05D002351 3.9e-07 59.3 164 34.8
PGSC0003DMG400028789 Solanum tuberosum HOM05D002253 ORTHO05D002351 3.9e-07 59.3 174 36.8
TPR.G35240 Trifolium pratense HOM05D002253 ORTHO05D002351 3.9e-07 59.3 203 32.5
TAR622G0007 Trochodendron aralioides HOM05D002253 ORTHO05D002351 3.9e-07 59.3 175 34.3
Actinidia39826 Actinidia chinensis HOM05D002253 ORTHO05D002351 5.1e-07 58.9 154 38.3
Peaxi162Scf00086g00101 Petunia axillaris HOM05D002253 ORTHO05D002351 5.1e-07 58.9 170 32.9
Solyc12g036900.1 Solanum lycopersicum HOM05D002253 ORTHO05D002351 5.1e-07 58.9 177 32.2
TAR371G1148 Trochodendron aralioides HOM05D002253 ORTHO05D002351 5.1e-07 58.9 183 32.8
TAR629G0720 Trochodendron aralioides HOM05D002253 ORTHO05D002351 5.1e-07 58.9 167 35.3
VMungo0251G2449 Vigna mungo HOM05D002253 ORTHO05D002351 5.1e-07 58.9 171 33.3
CSS0003643 Camellia sinensis var. sinensis HOM05D002253 ORTHO05D002351 6.7e-07 58.5 164 32.3
ClCG08G005250 Citrullus lanatus HOM05D002253 ORTHO05D002351 6.7e-07 58.5 154 40.3
COL.COLO4_07913 Corchorus olitorius HOM05D002253 ORTHO05D002351 6.7e-07 58.5 168 33.3
Dinv21099 Davidia involucrata HOM05D002253 ORTHO05D002351 6.7e-07 58.5 164 34.1
QL01p043511 Quercus lobata HOM05D002253 ORTHO05D002351 6.7e-07 58.5 175 32.6
Thecc.02G356300 Theobroma cacao HOM05D002253 ORTHO05D002351 6.7e-07 58.5 108 38.0
AT1G13360 Arabidopsis thaliana HOM05D002253 ORTHO05D002351 8.7e-07 58.2 154 36.4
MELO3C011565.2 Cucumis melo HOM05D002253 ORTHO05D002351 8.7e-07 58.2 157 40.1
Thhalv10008809m.g Eutrema salsugineum HOM05D002253 ORTHO05D002351 8.7e-07 58.2 189 31.7
Gorai.006G194800 Gossypium raimondii HOM05D002253 ORTHO05D002351 8.7e-07 58.2 208 32.2
Oeu027682.1 Olea europaea HOM05D002253 ORTHO05D002351 8.7e-07 58.2 137 33.6
Phvul.007G026700 Phaseolus vulgaris HOM05D002253 ORTHO05D002351 8.7e-07 58.2 95 40.0
HPP92_021598 Vanilla planifolia HOM05D002253 ORTHO05D002351 8.7e-07 58.2 118 38.1
Gohir.D12G266500 Gossypium hirsutum HOM05D002253 ORTHO05D002351 1.1e-06 57.8 224 30.8
AL5G14510 Arabidopsis lyrata HOM05D002253 ORTHO05D002351 1.5e-06 57.4 84 42.9
MSTRG.13521 Avicennia marina HOM05D002253 ORTHO05D002351 1.5e-06 57.4 188 30.9
Medtr1g111060 Medicago truncatula HOM05D002253 ORTHO05D002351 1.5e-06 57.4 108 35.2
Cpa.g.sc448.1 Carica papaya HOM05D002253 ORTHO05D002351 1.9e-06 57.0 163 30.7
CsaV3_6G003450 Cucumis sativus L. HOM05D002253 ORTHO05D002351 1.9e-06 57.0 155 37.4
Phvul.002G315700 Phaseolus vulgaris HOM05D002253 ORTHO05D002351 1.9e-06 57.0 215 32.1
HPP92_027122 Vanilla planifolia HOM05D002253 ORTHO05D002351 1.9e-06 57.0 118 37.3
arahy.Tifrunner.gnm1.ann1.AI2V23 Arachis hypogaea HOM05D002253 ORTHO05D002351 2.5e-06 56.6 198 33.8
Gohir.D09G172900 Gossypium hirsutum HOM05D002253 ORTHO05D002351 2.5e-06 56.6 208 32.2
HanXRQChr08g0214131 Helianthus annuus HOM05D002253 ORTHO05D002351 2.5e-06 56.6 172 32.6
Aa31LG1G1510 Aethionema arabicum HOM05D002253 ORTHO05D002351 3.3e-06 56.2 156 32.7
Aa31LG2G6490 Aethionema arabicum HOM05D002253 ORTHO05D002351 3.3e-06 56.2 124 36.3
AT3G25870 Arabidopsis thaliana HOM05D002253 ORTHO05D002351 3.3e-06 56.2 100 41.0
CsaV3_5G034240 Cucumis sativus L. HOM05D002253 ORTHO05D002351 3.3e-06 56.2 98 41.8
Thhalv10005009m.g Eutrema salsugineum HOM05D002253 ORTHO05D002351 3.3e-06 56.2 102 41.2
Nitab4.5_0011024g0010 Nicotiana tabacum HOM05D002253 ORTHO05D002351 3.3e-06 56.2 162 32.1
Ca_11178_v3 Cicer arietinum L. HOM05D002253 ORTHO05D002351 4.3e-06 55.8 118 33.9
Lsat_1_v5_gn_3_59460 Lactuca sativa HOM05D002253 ORTHO05D002351 4.3e-06 55.8 170 30.6
Manes.14G101400 Manihot esculenta HOM05D002253 ORTHO05D002351 4.3e-06 55.8 108 38.0
Nitab4.5_0004895g0030 Nicotiana tabacum HOM05D002253 ORTHO05D002351 4.3e-06 55.8 138 34.1
Potri.008G119800 Populus trichocarpa HOM05D002253 ORTHO05D002351 4.3e-06 55.8 125 35.2
Sed0004753 Sechium edule HOM05D002253 ORTHO05D002351 4.3e-06 55.8 151 37.1
TWI31G0181 Tripterygium wilfordii HOM05D002253 ORTHO05D002351 4.3e-06 55.8 158 34.8
CANSAT01G2454 Cannabis sativa HOM05D002253 ORTHO05D002351 5.6e-06 55.5 186 30.6
Lalb_Chr21g0308971 Lupinus albus HOM05D002253 ORTHO05D002351 5.6e-06 55.5 129 36.4
BcaC07g38689 Brassica carinata HOM05D002253 ORTHO05D002351 7.4e-06 55.1 173 30.6
C08p16090 Brassica napus HOM05D002253 ORTHO05D002351 7.4e-06 55.1 173 30.6
BolC8t49232H Brassica oleracea HOM05D002253 ORTHO05D002351 7.4e-06 55.1 173 30.6
Carub.0005s0370 Capsella rubella HOM05D002253 ORTHO05D002351 7.4e-06 55.1 98 41.8
Gohir.A09G177400 Gossypium hirsutum HOM05D002253 ORTHO05D002351 7.4e-06 55.1 193 32.1
HanXRQChr12g0364641 Helianthus annuus HOM05D002253 ORTHO05D002351 7.4e-06 55.1 181 33.1
HanXRQChr17g0552161 Helianthus annuus HOM05D002253 ORTHO05D002351 7.4e-06 55.1 173 31.8
Hma1.2p1_0061F.1_g034080 Hydrangea macrophylla HOM05D002253 ORTHO05D002351 7.4e-06 55.1 102 38.2
Oeu008049.1 Olea europaea HOM05D002253 ORTHO05D002351 7.4e-06 55.1 139 40.3
Psat1g038160 Pisum sativum HOM05D002253 ORTHO05D002351 7.4e-06 55.1 218 31.7
SalBow8G5368 Salvia bowleyana HOM05D002253 ORTHO05D002351 7.4e-06 55.1 190 33.7
Sopen04g002220 Solanum pennellii HOM05D002253 ORTHO05D002351 7.4e-06 55.1 167 31.7
TAR374G0921 Trochodendron aralioides HOM05D002253 ORTHO05D002351 7.4e-06 55.1 174 35.1
HPP92_027373 Vanilla planifolia HOM05D002253 ORTHO05D002351 7.4e-06 55.1 77 45.5
CARHR146830 Cardamine hirsuta HOM05D002253 ORTHO05D002351 9.6e-06 54.7 88 44.3
Psat6g228840 Pisum sativum HOM05D002253 ORTHO05D002351 9.6e-06 54.7 93 36.6
HPP92_000151 Vanilla planifolia HOM05D002253 ORTHO05D002351 9.6e-06 54.7 94 39.4
GSVIVG01011906001 Vitis vinifera HOM05D002253 ORTHO05D002351 9.6e-06 54.7 217 30.9


User provided reference genes

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